EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSPEMG00000007973 (Gene tree)
Gene ID
102902762
Gene Symbol
Cpsf6
Alias
-
Full Name
cleavage and polyadenylation specific factor 6
Gene Type
protein_coding
Species
Peromyscus_maniculatus_bairdii
Status
putative
Strand
Plus strand
Length
21847 bases
Position
chrKI615347.1:10152785-10174631
Accession
102902762
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSPEMP00000005567RRM_1PF00076.228.4e-0711
ENSPEMP00000005562RRM_1PF00076.229.3e-0711
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSPEMT00000009626-1599-ENSPEMP00000005567532 (aa)--
ENSPEMT00000009621-5623XM_015992263ENSPEMP00000005562568 (aa)XP_015847749-
Gene Model
Click here to download ENSPEMG00000007973's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSPEMG00000007973's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSPEMG00000007973Cpsf66651.795ENSPEMG00000012648Cpsf77358.857
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSPEMG00000007973Cpsf66857.246ENSG00000149532CPSF79057.471Homo_sapiens
ENSPEMG00000007973Cpsf610099.824ENSG00000111605CPSF69799.824Homo_sapiens
ENSPEMG00000007973Cpsf610099.648ENSAMEG00000011781CPSF69799.648Ailuropoda_melanoleuca
ENSPEMG00000007973Cpsf67540.212ENSAOCG00000012357CPSF76842.593Amphiprion_ocellaris
ENSPEMG00000007973Cpsf66346.766ENSANAG00000024635CPSF76753.039Aotus_nancymaae
ENSPEMG00000007973Cpsf610099.824ENSANAG00000019240CPSF69999.824Aotus_nancymaae
ENSPEMG00000007973Cpsf66190.419ENSAMXG00000016745CPSF67090.303Astyanax_mexicanus
ENSPEMG00000007973Cpsf610099.648ENSBTAG00000007323CPSF69799.648Bos_taurus
ENSPEMG00000007973Cpsf66351.795ENSBTAG00000015263CPSF76758.286Bos_taurus
ENSPEMG00000007973Cpsf67548.901ENSCJAG00000019282CPSF77957.714Callithrix_jacchus
ENSPEMG00000007973Cpsf610099.649ENSCJAG00000001798CPSF69799.649Callithrix_jacchus
ENSPEMG00000007973Cpsf610099.824ENSCAFG00000000424CPSF69999.824Canis_familiaris
ENSPEMG00000007973Cpsf66351.795ENSCAFG00000016152CPSF76758.857Canis_familiaris
ENSPEMG00000007973Cpsf610099.824ENSCAFG00020016950CPSF69799.824Canis_lupus_dingo
ENSPEMG00000007973Cpsf66351.795ENSCAFG00020012753CPSF76758.857Canis_lupus_dingo
ENSPEMG00000007973Cpsf66351.795ENSCHIG00000014655CPSF76758.286Capra_hircus
ENSPEMG00000007973Cpsf610099.648ENSCHIG00000010792CPSF69799.648Capra_hircus
ENSPEMG00000007973Cpsf610099.824ENSTSYG00000008591CPSF69999.668Carlito_syrichta
ENSPEMG00000007973Cpsf66351.795ENSTSYG00000010138-6758.857Carlito_syrichta
ENSPEMG00000007973Cpsf66351.795ENSCAPG00000006384CPSF77058.857Cavia_aperea
ENSPEMG00000007973Cpsf610099.472ENSCPOG00000015201CPSF69799.472Cavia_porcellus
ENSPEMG00000007973Cpsf66351.795ENSCPOG00000009980CPSF76756.000Cavia_porcellus
ENSPEMG00000007973Cpsf610099.649ENSCCAG00000028149CPSF69799.649Cebus_capucinus
ENSPEMG00000007973Cpsf66351.282ENSCCAG00000032367CPSF76758.286Cebus_capucinus
ENSPEMG00000007973Cpsf610099.824ENSCATG00000039288CPSF69799.824Cercocebus_atys
ENSPEMG00000007973Cpsf66651.282ENSCATG00000042801CPSF77358.286Cercocebus_atys
ENSPEMG00000007973Cpsf66351.795ENSCLAG00000003174CPSF76755.429Chinchilla_lanigera
ENSPEMG00000007973Cpsf610099.624ENSCLAG00000010149CPSF610099.472Chinchilla_lanigera
ENSPEMG00000007973Cpsf66651.282ENSCSAG00000006414CPSF77358.286Chlorocebus_sabaeus
ENSPEMG00000007973Cpsf610099.824ENSCSAG00000004232CPSF69799.824Chlorocebus_sabaeus
ENSPEMG00000007973Cpsf610097.556ENSCPBG00000013322CPSF69697.556Chrysemys_picta_bellii
ENSPEMG00000007973Cpsf65559.441ENSCSAVG00000000161-5263.780Ciona_savignyi
ENSPEMG00000007973Cpsf610099.824ENSCANG00000037294CPSF610099.824Colobus_angolensis_palliatus
ENSPEMG00000007973Cpsf66452.308ENSCGRG00001020382Cpsf76757.714Cricetulus_griseus_chok1gshd
ENSPEMG00000007973Cpsf610099.824ENSCGRG00001018082Cpsf69899.812Cricetulus_griseus_chok1gshd
ENSPEMG00000007973Cpsf66554.378ENSCGRG00000017954Cpsf77359.429Cricetulus_griseus_crigri
ENSPEMG00000007973Cpsf610099.824ENSCGRG00000016909Cpsf610099.824Cricetulus_griseus_crigri
ENSPEMG00000007973Cpsf65343.299ENSCSEG00000001956CPSF75747.552Cynoglossus_semilaevis
ENSPEMG00000007973Cpsf65074.627ENSCVAG00000014857cpsf65375.875Cyprinodon_variegatus
ENSPEMG00000007973Cpsf66636.842ENSCVAG00000007392CPSF76644.521Cyprinodon_variegatus
ENSPEMG00000007973Cpsf610099.436ENSDNOG00000015292CPSF69699.436Dasypus_novemcinctus
ENSPEMG00000007973Cpsf67549.451ENSDNOG00000018517CPSF77958.286Dasypus_novemcinctus
ENSPEMG00000007973Cpsf610099.824ENSDORG00000002950Cpsf610099.824Dipodomys_ordii
ENSPEMG00000007973Cpsf610092.430ENSETEG00000002097CPSF69792.430Echinops_telfairi
ENSPEMG00000007973Cpsf66352.041ENSETEG00000003765CPSF76757.310Echinops_telfairi
ENSPEMG00000007973Cpsf610099.824ENSEASG00005008066CPSF69799.824Equus_asinus_asinus
ENSPEMG00000007973Cpsf66351.795ENSEASG00005008196CPSF76758.857Equus_asinus_asinus
ENSPEMG00000007973Cpsf610099.824ENSECAG00000015988CPSF69799.824Equus_caballus
ENSPEMG00000007973Cpsf67549.451ENSECAG00000018521CPSF78658.286Equus_caballus
ENSPEMG00000007973Cpsf65062.069ENSEEUG00000005966-6661.017Erinaceus_europaeus
ENSPEMG00000007973Cpsf610099.120ENSEEUG00000015039CPSF610099.120Erinaceus_europaeus
ENSPEMG00000007973Cpsf610099.648ENSFCAG00000002855CPSF69799.648Felis_catus
ENSPEMG00000007973Cpsf67549.451ENSFCAG00000013677CPSF78658.286Felis_catus
ENSPEMG00000007973Cpsf610098.120ENSFALG00000010157CPSF69998.120Ficedula_albicollis
ENSPEMG00000007973Cpsf66256.452ENSFALG00000011927CPSF77158.140Ficedula_albicollis
ENSPEMG00000007973Cpsf610099.436ENSFDAG00000002281CPSF69799.296Fukomys_damarensis
ENSPEMG00000007973Cpsf69538.964ENSFDAG00000003919CPSF76756.000Fukomys_damarensis
ENSPEMG00000007973Cpsf65073.759ENSFHEG00000019693cpsf65070.205Fundulus_heteroclitus
ENSPEMG00000007973Cpsf65291.736ENSGMOG00000012951cpsf65093.388Gadus_morhua
ENSPEMG00000007973Cpsf66452.821ENSGALG00000040962CPSF75958.960Gallus_gallus
ENSPEMG00000007973Cpsf610097.556ENSGAGG00000010228CPSF69697.556Gopherus_agassizii
ENSPEMG00000007973Cpsf610099.812ENSGGOG00000008211CPSF69799.649Gorilla_gorilla
ENSPEMG00000007973Cpsf66652.308ENSHGLG00000019090-7356.000Heterocephalus_glaber_female
ENSPEMG00000007973Cpsf610099.436ENSHGLG00000000792CPSF69799.296Heterocephalus_glaber_female
ENSPEMG00000007973Cpsf610099.436ENSHGLG00100013861CPSF610099.436Heterocephalus_glaber_male
ENSPEMG00000007973Cpsf66652.308ENSHGLG00100013933-7456.000Heterocephalus_glaber_male
ENSPEMG00000007973Cpsf610099.824ENSSTOG00000014133CPSF610099.624Ictidomys_tridecemlineatus
ENSPEMG00000007973Cpsf66351.795ENSSTOG00000007708CPSF76758.857Ictidomys_tridecemlineatus
ENSPEMG00000007973Cpsf66651.795ENSJJAG00000019390Cpsf77358.857Jaculus_jaculus
ENSPEMG00000007973Cpsf610099.824ENSJJAG00000014647Cpsf610099.824Jaculus_jaculus
ENSPEMG00000007973Cpsf68140.331ENSLBEG00000000947CPSF76737.838Labrus_bergylta
ENSPEMG00000007973Cpsf66544.231ENSLACG00000005542CPSF76944.231Latimeria_chalumnae
ENSPEMG00000007973Cpsf66595.294ENSLOCG00000016190cpsf66395.294Lepisosteus_oculatus
ENSPEMG00000007973Cpsf66352.308ENSLAFG00000032084CPSF76759.429Loxodonta_africana
ENSPEMG00000007973Cpsf610099.624ENSLAFG00000030413CPSF69699.624Loxodonta_africana
ENSPEMG00000007973Cpsf66451.282ENSMFAG00000001401CPSF76858.286Macaca_fascicularis
ENSPEMG00000007973Cpsf610099.649ENSMFAG00000045318CPSF69799.649Macaca_fascicularis
ENSPEMG00000007973Cpsf610099.812ENSMMUG00000002921CPSF69799.649Macaca_mulatta
ENSPEMG00000007973Cpsf66651.282ENSMMUG00000015280CPSF77358.286Macaca_mulatta
ENSPEMG00000007973Cpsf66651.282ENSMNEG00000029585CPSF77358.286Macaca_nemestrina
ENSPEMG00000007973Cpsf610099.649ENSMNEG00000036311CPSF69799.649Macaca_nemestrina
ENSPEMG00000007973Cpsf610099.824ENSMLEG00000003957CPSF610099.824Mandrillus_leucophaeus
ENSPEMG00000007973Cpsf66451.282ENSMLEG00000031269CPSF76858.286Mandrillus_leucophaeus
ENSPEMG00000007973Cpsf69541.731ENSMGAG00000004876CPSF75961.446Meleagris_gallopavo
ENSPEMG00000007973Cpsf610095.113ENSMGAG00000010552CPSF69795.113Meleagris_gallopavo
ENSPEMG00000007973Cpsf610099.824ENSMAUG00000013240Cpsf69799.824Mesocricetus_auratus
ENSPEMG00000007973Cpsf66451.795ENSMAUG00000013020Cpsf76758.857Mesocricetus_auratus
ENSPEMG00000007973Cpsf610099.824ENSMICG00000007385-9799.824Microcebus_murinus
ENSPEMG00000007973Cpsf66351.795ENSMICG00000013788CPSF76758.857Microcebus_murinus
ENSPEMG00000007973Cpsf66451.795ENSMOCG00000000072Cpsf76758.857Microtus_ochrogaster
ENSPEMG00000007973Cpsf610099.824ENSMOCG00000013982Cpsf69799.824Microtus_ochrogaster
ENSPEMG00000007973Cpsf66352.792ENSMODG00000020364CPSF76857.386Monodelphis_domestica
ENSPEMG00000007973Cpsf610098.872ENSMODG00000007123CPSF69698.872Monodelphis_domestica
ENSPEMG00000007973Cpsf67389.175ENSMALG00000014908cpsf67491.525Monopterus_albus
ENSPEMG00000007973Cpsf610099.824MGP_CAROLIEiJ_G0015834Cpsf69799.824Mus_caroli
ENSPEMG00000007973Cpsf66451.795MGP_CAROLIEiJ_G0022690Cpsf76758.857Mus_caroli
ENSPEMG00000007973Cpsf610099.472ENSMUSG00000055531Cpsf69799.472Mus_musculus
ENSPEMG00000007973Cpsf66451.795ENSMUSG00000034820Cpsf76758.857Mus_musculus
ENSPEMG00000007973Cpsf66451.795MGP_PahariEiJ_G0014184Cpsf76758.857Mus_pahari
ENSPEMG00000007973Cpsf68299.336MGP_PahariEiJ_G0031253Cpsf68399.052Mus_pahari
ENSPEMG00000007973Cpsf66451.795MGP_SPRETEiJ_G0023604Cpsf76758.857Mus_spretus
ENSPEMG00000007973Cpsf610099.472MGP_SPRETEiJ_G0016657Cpsf69799.472Mus_spretus
ENSPEMG00000007973Cpsf610097.744ENSMPUG00000017502CPSF69797.744Mustela_putorius_furo
ENSPEMG00000007973Cpsf66350.769ENSMPUG00000014163CPSF76657.714Mustela_putorius_furo
ENSPEMG00000007973Cpsf66785.246ENSMLUG00000023960-7684.324Myotis_lucifugus
ENSPEMG00000007973Cpsf67694.928ENSMLUG00000028728-8894.898Myotis_lucifugus
ENSPEMG00000007973Cpsf610097.744ENSMLUG00000004172-9797.744Myotis_lucifugus
ENSPEMG00000007973Cpsf66651.795ENSMLUG00000013278CPSF77358.857Myotis_lucifugus
ENSPEMG00000007973Cpsf610099.824ENSNGAG00000015901Cpsf69799.824Nannospalax_galili
ENSPEMG00000007973Cpsf66451.795ENSNGAG00000005031Cpsf76758.857Nannospalax_galili
ENSPEMG00000007973Cpsf610099.624ENSNLEG00000003798CPSF69799.473Nomascus_leucogenys
ENSPEMG00000007973Cpsf66351.282ENSNLEG00000002529CPSF76158.286Nomascus_leucogenys
ENSPEMG00000007973Cpsf610096.303ENSMEUG00000015041CPSF69696.303Notamacropus_eugenii
ENSPEMG00000007973Cpsf66354.082ENSMEUG00000002261CPSF76758.721Notamacropus_eugenii
ENSPEMG00000007973Cpsf610099.296ENSOPRG00000005199CPSF610099.296Ochotona_princeps
ENSPEMG00000007973Cpsf610097.744ENSODEG00000018399-9697.744Octodon_degus
ENSPEMG00000007973Cpsf67799.194ENSODEG00000004418-9098.795Octodon_degus
ENSPEMG00000007973Cpsf66349.495ENSODEG00000002610CPSF76755.618Octodon_degus
ENSPEMG00000007973Cpsf67882.443ENSODEG00000007109-6680.576Octodon_degus
ENSPEMG00000007973Cpsf67483.846ENSONIG00000011702cpsf69180.517Oreochromis_niloticus
ENSPEMG00000007973Cpsf69481.038ENSOANG00000005944CPSF65086.742Ornithorhynchus_anatinus
ENSPEMG00000007973Cpsf610099.824ENSOCUG00000013505CPSF69799.824Oryctolagus_cuniculus
ENSPEMG00000007973Cpsf69939.746ENSOCUG00000024726CPSF76758.286Oryctolagus_cuniculus
ENSPEMG00000007973Cpsf67435.789ENSORLG00000006495CPSF75549.558Oryzias_latipes
ENSPEMG00000007973Cpsf67335.789ENSORLG00020012657CPSF75549.558Oryzias_latipes_hni
ENSPEMG00000007973Cpsf67037.838ENSOMEG00000000539CPSF77937.267Oryzias_melastigma
ENSPEMG00000007973Cpsf610097.368ENSOGAG00000031988CPSF69997.368Otolemur_garnettii
ENSPEMG00000007973Cpsf66351.795ENSOGAG00000027958CPSF76258.857Otolemur_garnettii
ENSPEMG00000007973Cpsf610099.473ENSOARG00000020532CPSF610099.627Ovis_aries
ENSPEMG00000007973Cpsf66351.795ENSOARG00000012937CPSF76158.286Ovis_aries
ENSPEMG00000007973Cpsf610097.012ENSPPAG00000005301CPSF69897.012Pan_paniscus
ENSPEMG00000007973Cpsf66351.282ENSPPAG00000028232CPSF76958.286Pan_paniscus
ENSPEMG00000007973Cpsf610099.648ENSPPRG00000021620CPSF69799.648Panthera_pardus
ENSPEMG00000007973Cpsf66351.795ENSPPRG00000008538CPSF76758.857Panthera_pardus
ENSPEMG00000007973Cpsf69499.627ENSPTIG00000004079CPSF610099.627Panthera_tigris_altaica
ENSPEMG00000007973Cpsf66351.795ENSPTIG00000021699CPSF76758.857Panthera_tigris_altaica
ENSPEMG00000007973Cpsf66351.282ENSPTRG00000003742CPSF76958.286Pan_troglodytes
ENSPEMG00000007973Cpsf610099.812ENSPTRG00000005205CPSF69799.649Pan_troglodytes
ENSPEMG00000007973Cpsf610099.824ENSPANG00000011641CPSF69799.824Papio_anubis
ENSPEMG00000007973Cpsf66451.282ENSPANG00000006037CPSF76858.286Papio_anubis
ENSPEMG00000007973Cpsf65948.023ENSPKIG00000018054CPSF77544.681Paramormyrops_kingsleyae
ENSPEMG00000007973Cpsf69481.312ENSPKIG00000003081-9181.275Paramormyrops_kingsleyae
ENSPEMG00000007973Cpsf65894.512ENSPSIG00000016360CPSF67694.512Pelodiscus_sinensis
ENSPEMG00000007973Cpsf66352.736ENSPCIG00000002551CPSF77956.284Phascolarctos_cinereus
ENSPEMG00000007973Cpsf610099.120ENSPCIG00000019063CPSF69799.120Phascolarctos_cinereus
ENSPEMG00000007973Cpsf68284.706ENSPFOG00000006990cpsf65381.467Poecilia_formosa
ENSPEMG00000007973Cpsf65077.239ENSPMEG00000001353cpsf65069.000Poecilia_mexicana
ENSPEMG00000007973Cpsf66351.282ENSPPYG00000003188CPSF76758.286Pongo_abelii
ENSPEMG00000007973Cpsf610099.436ENSPPYG00000004756CPSF69699.436Pongo_abelii
ENSPEMG00000007973Cpsf610099.824ENSPCAG00000011574CPSF69799.824Procavia_capensis
ENSPEMG00000007973Cpsf610099.624ENSPCOG00000024384CPSF69799.473Propithecus_coquereli
ENSPEMG00000007973Cpsf66351.795ENSPCOG00000011976CPSF76758.857Propithecus_coquereli
ENSPEMG00000007973Cpsf610099.296ENSPVAG00000015753CPSF69799.296Pteropus_vampyrus
ENSPEMG00000007973Cpsf66351.795ENSPVAG00000010675CPSF76758.857Pteropus_vampyrus
ENSPEMG00000007973Cpsf65646.497ENSPNAG00000015073CPSF76847.879Pygocentrus_nattereri
ENSPEMG00000007973Cpsf610099.436ENSRNOG00000005927Cpsf69699.436Rattus_norvegicus
ENSPEMG00000007973Cpsf66651.282ENSRNOG00000020668Cpsf77358.721Rattus_norvegicus
ENSPEMG00000007973Cpsf67548.901ENSRBIG00000031429CPSF78657.714Rhinopithecus_bieti
ENSPEMG00000007973Cpsf610099.624ENSRBIG00000042827CPSF69799.473Rhinopithecus_bieti
ENSPEMG00000007973Cpsf66351.282ENSRROG00000045009CPSF76758.286Rhinopithecus_roxellana
ENSPEMG00000007973Cpsf610099.648ENSRROG00000042758CPSF69799.648Rhinopithecus_roxellana
ENSPEMG00000007973Cpsf610099.649ENSSBOG00000010652CPSF610099.813Saimiri_boliviensis_boliviensis
ENSPEMG00000007973Cpsf66351.282ENSSBOG00000018431CPSF76758.286Saimiri_boliviensis_boliviensis
ENSPEMG00000007973Cpsf66351.269ENSSHAG00000011964CPSF76759.302Sarcophilus_harrisii
ENSPEMG00000007973Cpsf67142.130ENSSFOG00015010288cpsf77340.659Scleropages_formosus
ENSPEMG00000007973Cpsf69482.738ENSSFOG00015015803CPSF69180.517Scleropages_formosus
ENSPEMG00000007973Cpsf69478.373ENSSFOG00015001688CPSF67980.716Scleropages_formosus
ENSPEMG00000007973Cpsf69399.526ENSSARG00000006743CPSF69192.551Sorex_araneus
ENSPEMG00000007973Cpsf66452.604ENSSPUG00000019344CPSF76956.977Sphenodon_punctatus
ENSPEMG00000007973Cpsf69491.165ENSSPUG00000001238CPSF69792.362Sphenodon_punctatus
ENSPEMG00000007973Cpsf67549.451ENSSSCG00000013083CPSF77958.286Sus_scrofa
ENSPEMG00000007973Cpsf610099.824ENSSSCG00000038031CPSF610099.813Sus_scrofa
ENSPEMG00000007973Cpsf66154.444ENSTGUG00000006513CPSF76756.322Taeniopygia_guttata
ENSPEMG00000007973Cpsf66351.282ENSTTRG00000011085CPSF77058.857Tursiops_truncatus
ENSPEMG00000007973Cpsf66351.795ENSUAMG00000017809CPSF76758.857Ursus_americanus
ENSPEMG00000007973Cpsf69499.600ENSUAMG00000023492CPSF610099.600Ursus_americanus
ENSPEMG00000007973Cpsf66651.795ENSUMAG00000011825CPSF77358.857Ursus_maritimus
ENSPEMG00000007973Cpsf69499.813ENSUMAG00000020779CPSF610099.813Ursus_maritimus
ENSPEMG00000007973Cpsf610099.824ENSVPAG00000008469CPSF610099.824Vicugna_pacos
ENSPEMG00000007973Cpsf67549.451ENSVVUG00000004939CPSF77958.286Vulpes_vulpes
ENSPEMG00000007973Cpsf69499.813ENSVVUG00000010156-10099.813Vulpes_vulpes
ENSPEMG00000007973Cpsf69640.494ENSXETG00000006715cpsf76253.571Xenopus_tropicalis

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