EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPEMG00000008060 (Gene tree)
Gene ID: 102904393
Gene Symbol: Smarca5
Alias: -
Full Name: SWI/SNF related%2C matrix associated%2C actin dependent regulator of chromatin%2C subfamily a%2C member 5
Gene Type: protein_coding
Species: Peromyscus_maniculatus_bairdii
Status: putative
Strand: Minus strand
Length: 34610 bases
Position: chrKI615332.1:3399694-3434303
Accession: 102904393
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPEMP00000005668	ResIII	PF04851.15	7.4e-11	1	1
ENSPEMP00000005668	DEAD	PF00270.29	3.9e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPEMT00000009747	-	3054	XM_016006341	ENSPEMP00000005668	1017 (aa)	XP_015861827	-

Gene Model

Click here to download ENSPEMG00000008060's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPEMG00000008060's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPEMG00000008060	Smarca5	50	42.029	ENSPEMG00000017579	Hells	70	42.029
ENSPEMG00000008060	Smarca5	94	85.536	ENSPEMG00000017503	Smarca1	90	85.820

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPEMG00000008060	Smarca5	99	97.642	ENSG00000153147	SMARCA5	97	97.642	Homo_sapiens
ENSPEMG00000008060	Smarca5	99	97.839	ENSAMEG00000009585	SMARCA5	97	97.839	Ailuropoda_melanoleuca
ENSPEMG00000008060	Smarca5	95	96.715	ENSAPLG00000009206	SMARCA5	100	96.715	Anas_platyrhynchos
ENSPEMG00000008060	Smarca5	98	96.576	ENSACAG00000003038	SMARCA5	97	94.985	Anolis_carolinensis
ENSPEMG00000008060	Smarca5	98	99.097	ENSANAG00000019345	SMARCA5	100	99.097	Aotus_nancymaae
ENSPEMG00000008060	Smarca5	98	99.398	ENSBTAG00000003399	SMARCA5	95	99.398	Bos_taurus
ENSPEMG00000008060	Smarca5	99	97.839	ENSCJAG00000002735	SMARCA5	97	97.839	Callithrix_jacchus
ENSPEMG00000008060	Smarca5	99	97.839	ENSCAFG00000007525	SMARCA5	97	97.839	Canis_familiaris
ENSPEMG00000008060	Smarca5	98	97.695	ENSCAFG00020025641	SMARCA5	96	97.695	Canis_lupus_dingo
ENSPEMG00000008060	Smarca5	99	96.071	ENSCHIG00000016375	-	98	96.071	Capra_hircus
ENSPEMG00000008060	Smarca5	99	97.839	ENSCHIG00000013730	-	97	97.839	Capra_hircus
ENSPEMG00000008060	Smarca5	98	99.496	ENSTSYG00000009954	SMARCA5	99	99.496	Carlito_syrichta
ENSPEMG00000008060	Smarca5	95	99.483	ENSCAPG00000013747	SMARCA5	95	99.483	Cavia_aperea
ENSPEMG00000008060	Smarca5	99	97.839	ENSCPOG00000002259	SMARCA5	97	97.839	Cavia_porcellus
ENSPEMG00000008060	Smarca5	98	99.198	ENSCCAG00000027215	SMARCA5	100	99.198	Cebus_capucinus
ENSPEMG00000008060	Smarca5	99	97.741	ENSCATG00000044917	SMARCA5	97	97.741	Cercocebus_atys
ENSPEMG00000008060	Smarca5	98	99.799	ENSCLAG00000006153	SMARCA5	100	99.799	Chinchilla_lanigera
ENSPEMG00000008060	Smarca5	95	99.484	ENSCSAG00000003448	SMARCA5	100	99.484	Chlorocebus_sabaeus
ENSPEMG00000008060	Smarca5	90	98.519	ENSCHOG00000011724	SMARCA5	88	98.519	Choloepus_hoffmanni
ENSPEMG00000008060	Smarca5	98	98.191	ENSCPBG00000027535	SMARCA5	96	98.191	Chrysemys_picta_bellii
ENSPEMG00000008060	Smarca5	99	97.741	ENSCANG00000041629	SMARCA5	97	97.741	Colobus_angolensis_palliatus
ENSPEMG00000008060	Smarca5	99	98.807	ENSCGRG00001012719	Smarca5	95	98.807	Cricetulus_griseus_chok1gshd
ENSPEMG00000008060	Smarca5	100	98.230	ENSCGRG00000001417	Smarca5	99	99.899	Cricetulus_griseus_crigri
ENSPEMG00000008060	Smarca5	99	95.172	ENSDNOG00000009158	SMARCA5	96	95.172	Dasypus_novemcinctus
ENSPEMG00000008060	Smarca5	93	90.928	ENSDORG00000003466	Smarca5	97	90.928	Dipodomys_ordii
ENSPEMG00000008060	Smarca5	95	85.640	ENSEBUG00000014773	SMARCA5	96	85.640	Eptatretus_burgeri
ENSPEMG00000008060	Smarca5	99	97.839	ENSEASG00005001866	SMARCA5	98	99.636	Equus_asinus_asinus
ENSPEMG00000008060	Smarca5	99	97.839	ENSECAG00000002676	SMARCA5	97	97.839	Equus_caballus
ENSPEMG00000008060	Smarca5	98	95.166	ENSEEUG00000013176	SMARCA5	100	95.166	Erinaceus_europaeus
ENSPEMG00000008060	Smarca5	95	89.278	ENSELUG00000014653	SMARCA5	99	89.278	Esox_lucius
ENSPEMG00000008060	Smarca5	99	97.839	ENSFCAG00000004544	SMARCA5	97	97.839	Felis_catus
ENSPEMG00000008060	Smarca5	95	97.320	ENSFALG00000004987	SMARCA5	100	97.320	Ficedula_albicollis
ENSPEMG00000008060	Smarca5	99	99.104	ENSFDAG00000021016	SMARCA5	100	99.799	Fukomys_damarensis
ENSPEMG00000008060	Smarca5	96	89.355	ENSGMOG00000007519	SMARCA5	94	89.355	Gadus_morhua
ENSPEMG00000008060	Smarca5	99	95.575	ENSGALG00000009913	SMARCA5	98	95.575	Gallus_gallus
ENSPEMG00000008060	Smarca5	96	90.686	ENSGACG00000017238	SMARCA5	95	90.686	Gasterosteus_aculeatus
ENSPEMG00000008060	Smarca5	98	97.705	ENSGAGG00000019882	SMARCA5	96	97.705	Gopherus_agassizii
ENSPEMG00000008060	Smarca5	98	99.396	ENSGGOG00000012595	SMARCA5	99	99.396	Gorilla_gorilla
ENSPEMG00000008060	Smarca5	98	89.859	ENSHGLG00000000317	-	96	88.834	Heterocephalus_glaber_female
ENSPEMG00000008060	Smarca5	98	99.498	ENSHGLG00000000816	-	95	99.498	Heterocephalus_glaber_female
ENSPEMG00000008060	Smarca5	98	99.698	ENSHGLG00100018421	-	100	99.698	Heterocephalus_glaber_male
ENSPEMG00000008060	Smarca5	99	97.931	ENSSTOG00000010683	SMARCA5	96	97.931	Ictidomys_tridecemlineatus
ENSPEMG00000008060	Smarca5	99	97.168	ENSJJAG00000014965	Smarca5	98	97.168	Jaculus_jaculus
ENSPEMG00000008060	Smarca5	98	95.000	ENSLACG00000007091	SMARCA5	98	95.000	Latimeria_chalumnae
ENSPEMG00000008060	Smarca5	97	92.183	ENSLOCG00000008966	SMARCA5	96	92.183	Lepisosteus_oculatus
ENSPEMG00000008060	Smarca5	99	97.551	ENSLAFG00000007795	SMARCA5	97	97.551	Loxodonta_africana
ENSPEMG00000008060	Smarca5	99	97.741	ENSMFAG00000043649	SMARCA5	97	97.741	Macaca_fascicularis
ENSPEMG00000008060	Smarca5	99	97.741	ENSMMUG00000000829	SMARCA5	97	99.367	Macaca_mulatta
ENSPEMG00000008060	Smarca5	99	97.741	ENSMNEG00000031916	SMARCA5	97	97.741	Macaca_nemestrina
ENSPEMG00000008060	Smarca5	99	97.741	ENSMLEG00000042393	SMARCA5	97	97.741	Mandrillus_leucophaeus
ENSPEMG00000008060	Smarca5	99	96.524	ENSMGAG00000003517	SMARCA5	100	96.524	Meleagris_gallopavo
ENSPEMG00000008060	Smarca5	98	100.000	ENSMAUG00000015902	Smarca5	98	100.000	Mesocricetus_auratus
ENSPEMG00000008060	Smarca5	99	97.544	ENSMICG00000003971	SMARCA5	99	97.898	Microcebus_murinus
ENSPEMG00000008060	Smarca5	99	97.642	ENSMOCG00000016986	-	97	97.642	Microtus_ochrogaster
ENSPEMG00000008060	Smarca5	99	97.065	ENSMODG00000000391	SMARCA5	97	97.065	Monodelphis_domestica
ENSPEMG00000008060	Smarca5	99	97.931	ENSMUSG00000031715	Smarca5	97	97.931	Mus_musculus
ENSPEMG00000008060	Smarca5	99	98.128	MGP_PahariEiJ_G0022862	Smarca5	97	98.128	Mus_pahari
ENSPEMG00000008060	Smarca5	99	97.937	ENSMLUG00000000468	SMARCA5	97	97.937	Myotis_lucifugus
ENSPEMG00000008060	Smarca5	99	98.227	ENSNGAG00000000441	Smarca5	97	98.227	Nannospalax_galili
ENSPEMG00000008060	Smarca5	99	97.741	ENSNLEG00000005383	SMARCA5	97	97.741	Nomascus_leucogenys
ENSPEMG00000008060	Smarca5	95	91.322	ENSMEUG00000001267	SMARCA5	100	91.322	Notamacropus_eugenii
ENSPEMG00000008060	Smarca5	88	98.429	ENSOPRG00000014427	SMARCA5	86	98.429	Ochotona_princeps
ENSPEMG00000008060	Smarca5	95	99.071	ENSOANG00000013921	SMARCA5	100	99.071	Ornithorhynchus_anatinus
ENSPEMG00000008060	Smarca5	95	99.897	ENSOCUG00000013042	SMARCA5	100	99.897	Oryctolagus_cuniculus
ENSPEMG00000008060	Smarca5	99	97.734	ENSOGAG00000009702	SMARCA5	96	97.734	Otolemur_garnettii
ENSPEMG00000008060	Smarca5	99	98.408	ENSOARG00000010589	SMARCA5	95	98.408	Ovis_aries
ENSPEMG00000008060	Smarca5	98	99.295	ENSPPAG00000028523	SMARCA5	99	99.295	Pan_paniscus
ENSPEMG00000008060	Smarca5	98	93.574	ENSPPRG00000004925	SMARCA5	97	92.927	Panthera_pardus
ENSPEMG00000008060	Smarca5	98	99.498	ENSPTIG00000020959	SMARCA5	96	99.498	Panthera_tigris_altaica
ENSPEMG00000008060	Smarca5	98	99.396	ENSPTRG00000016472	SMARCA5	99	99.396	Pan_troglodytes
ENSPEMG00000008060	Smarca5	99	97.741	ENSPANG00000001175	SMARCA5	97	97.741	Papio_anubis
ENSPEMG00000008060	Smarca5	96	90.676	ENSPKIG00000015699	SMARCA5	98	89.716	Paramormyrops_kingsleyae
ENSPEMG00000008060	Smarca5	96	90.900	ENSPKIG00000015885	SMARCA5	100	91.134	Paramormyrops_kingsleyae
ENSPEMG00000008060	Smarca5	98	95.888	ENSPSIG00000004177	SMARCA5	100	95.888	Pelodiscus_sinensis
ENSPEMG00000008060	Smarca5	95	89.815	ENSPMGG00000012316	SMARCA5	100	89.815	Periophthalmus_magnuspinnatus
ENSPEMG00000008060	Smarca5	97	70.482	ENSPMAG00000006011	SMARCA5	81	85.440	Petromyzon_marinus
ENSPEMG00000008060	Smarca5	63	86.895	ENSPMAG00000008026	SMARCA5	99	86.895	Petromyzon_marinus
ENSPEMG00000008060	Smarca5	99	97.250	ENSPCIG00000003926	SMARCA5	97	97.250	Phascolarctos_cinereus
ENSPEMG00000008060	Smarca5	99	97.642	ENSPPYG00000015091	SMARCA5	97	97.642	Pongo_abelii
ENSPEMG00000008060	Smarca5	82	95.500	ENSPCAG00000014230	SMARCA5	83	95.500	Procavia_capensis
ENSPEMG00000008060	Smarca5	98	95.976	ENSPCOG00000026744	SMARCA5	99	95.976	Propithecus_coquereli
ENSPEMG00000008060	Smarca5	99	97.741	ENSPVAG00000006482	SMARCA5	97	97.741	Pteropus_vampyrus
ENSPEMG00000008060	Smarca5	98	89.749	ENSPNAG00000027824	SMARCA5	97	90.249	Pygocentrus_nattereri
ENSPEMG00000008060	Smarca5	98	99.698	ENSRNOG00000018149	Smarca5	99	99.698	Rattus_norvegicus
ENSPEMG00000008060	Smarca5	99	97.743	ENSRBIG00000044644	SMARCA5	97	97.743	Rhinopithecus_bieti
ENSPEMG00000008060	Smarca5	98	99.497	ENSRROG00000029591	SMARCA5	99	99.497	Rhinopithecus_roxellana
ENSPEMG00000008060	Smarca5	99	97.741	ENSSBOG00000036257	SMARCA5	97	97.741	Saimiri_boliviensis_boliviensis
ENSPEMG00000008060	Smarca5	98	99.094	ENSSHAG00000008464	SMARCA5	100	99.094	Sarcophilus_harrisii
ENSPEMG00000008060	Smarca5	97	90.679	ENSSFOG00015013252	SMARCA5	97	88.484	Scleropages_formosus
ENSPEMG00000008060	Smarca5	99	94.887	ENSSPUG00000007604	SMARCA5	99	96.566	Sphenodon_punctatus
ENSPEMG00000008060	Smarca5	99	97.741	ENSSSCG00000009047	SMARCA5	97	97.741	Sus_scrofa
ENSPEMG00000008060	Smarca5	99	95.631	ENSTGUG00000002408	SMARCA5	99	95.631	Taeniopygia_guttata
ENSPEMG00000008060	Smarca5	98	97.695	ENSUAMG00000023495	SMARCA5	95	97.695	Ursus_americanus
ENSPEMG00000008060	Smarca5	98	99.498	ENSUMAG00000015324	SMARCA5	97	99.498	Ursus_maritimus
ENSPEMG00000008060	Smarca5	99	97.544	ENSVPAG00000008982	SMARCA5	97	97.544	Vicugna_pacos
ENSPEMG00000008060	Smarca5	99	97.839	ENSVVUG00000017473	SMARCA5	97	97.839	Vulpes_vulpes
ENSPEMG00000008060	Smarca5	92	93.823	ENSXETG00000017566	smarca5	94	93.823	Xenopus_tropicalis