EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPEMG00000008279 (Gene tree)
Gene ID: 102917098
Gene Symbol: -
Alias: -
Full Name: RNA binding motif protein 12B
Gene Type: protein_coding
Species: Peromyscus_maniculatus_bairdii
Status: putative
Strand: Plus strand
Length: 6843 bases
Position: chrKI615369.1:7910291-7917133
Accession: 102917098
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPEMP00000005900	RRM_1	PF00076.22	1.5e-30	1	3
ENSPEMP00000005900	RRM_1	PF00076.22	1.5e-30	2	3
ENSPEMP00000005900	RRM_1	PF00076.22	1.5e-30	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPEMT00000010007	-	6078	XM_006974946	ENSPEMP00000005900	842 (aa)	XP_006975008	UPI00042AEFF4

Gene Model

Click here to download ENSPEMG00000008279's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPEMG00000008279's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPEMG00000008279	-	50	32.381	ENSPEMG00000019998	-	84	32.381
ENSPEMG00000008279	-	50	33.333	ENSPEMG00000018866	Hnrnph1	84	32.381
ENSPEMG00000008279	-	67	71.264	ENSPEMG00000017769	Rbm12	54	71.264

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPEMG00000008279	-	100	78.571	ENSG00000183808	RBM12B	100	96.341	Homo_sapiens
ENSPEMG00000008279	-	67	49.351	ENSAPOG00000013963	rbm12b	86	49.351	Acanthochromis_polyacanthus
ENSPEMG00000008279	-	100	78.696	ENSAMEG00000007134	RBM12B	100	78.696	Ailuropoda_melanoleuca
ENSPEMG00000008279	-	57	39.228	ENSACIG00000014943	rbm12b	99	39.365	Amphilophus_citrinellus
ENSPEMG00000008279	-	67	50.649	ENSAOCG00000024270	rbm12b	100	38.477	Amphiprion_ocellaris
ENSPEMG00000008279	-	65	47.761	ENSAPEG00000022079	rbm12b	96	43.033	Amphiprion_percula
ENSPEMG00000008279	-	67	48.052	ENSATEG00000004578	rbm12b	85	48.052	Anabas_testudineus
ENSPEMG00000008279	-	84	59.732	ENSAPLG00000002020	RBM12B	100	59.732	Anas_platyrhynchos
ENSPEMG00000008279	-	86	41.954	ENSACAG00000003463	RBM12B	70	41.954	Anolis_carolinensis
ENSPEMG00000008279	-	100	78.646	ENSANAG00000034015	RBM12B	100	78.646	Aotus_nancymaae
ENSPEMG00000008279	-	61	48.052	ENSACLG00000005578	rbm12b	78	48.052	Astatotilapia_calliptera
ENSPEMG00000008279	-	67	48.052	ENSACLG00000005575	rbm12b	84	48.052	Astatotilapia_calliptera
ENSPEMG00000008279	-	50	58.140	ENSAMXG00000020853	zgc:153215	70	58.140	Astyanax_mexicanus
ENSPEMG00000008279	-	67	46.753	ENSAMXG00000041973	rbm12b	87	46.753	Astyanax_mexicanus
ENSPEMG00000008279	-	100	77.074	ENSBTAG00000013408	RBM12B	100	77.074	Bos_taurus
ENSPEMG00000008279	-	100	68.040	ENSCAFG00000009109	RBM12B	100	75.513	Canis_familiaris
ENSPEMG00000008279	-	100	76.686	ENSCAFG00020012203	RBM12B	100	76.343	Canis_lupus_dingo
ENSPEMG00000008279	-	76	78.428	ENSCHIG00000006790	RBM12B	88	78.428	Capra_hircus
ENSPEMG00000008279	-	100	69.980	ENSTSYG00000012515	RBM12B	100	68.053	Carlito_syrichta
ENSPEMG00000008279	-	100	73.452	ENSCAPG00000003543	RBM12B	100	72.088	Cavia_aperea
ENSPEMG00000008279	-	100	73.452	ENSCPOG00000007815	RBM12B	100	72.088	Cavia_porcellus
ENSPEMG00000008279	-	100	77.829	ENSCATG00000030769	RBM12B	100	74.634	Cercocebus_atys
ENSPEMG00000008279	-	100	73.977	ENSCLAG00000017617	RBM12B	100	68.239	Chinchilla_lanigera
ENSPEMG00000008279	-	100	75.236	ENSCSAG00000018559	RBM12B	100	75.679	Chlorocebus_sabaeus
ENSPEMG00000008279	-	98	68.809	ENSCHOG00000008934	RBM12B	100	64.540	Choloepus_hoffmanni
ENSPEMG00000008279	-	84	59.574	ENSCPBG00000003061	RBM12B	100	59.574	Chrysemys_picta_bellii
ENSPEMG00000008279	-	100	77.855	ENSCANG00000030379	RBM12B	100	74.153	Colobus_angolensis_palliatus
ENSPEMG00000008279	-	100	92.399	ENSCGRG00001008710	-	97	92.399	Cricetulus_griseus_chok1gshd
ENSPEMG00000008279	-	67	50.649	ENSCSEG00000004610	rbm12b	81	50.649	Cynoglossus_semilaevis
ENSPEMG00000008279	-	57	33.333	ENSCVAG00000009259	-	99	33.333	Cyprinodon_variegatus
ENSPEMG00000008279	-	67	49.351	ENSCVAG00000011047	rbm12b	86	49.351	Cyprinodon_variegatus
ENSPEMG00000008279	-	69	42.697	ENSDARG00000079717	rbm12b	82	42.697	Danio_rerio
ENSPEMG00000008279	-	100	67.264	ENSDNOG00000041608	RBM12B	100	75.307	Dasypus_novemcinctus
ENSPEMG00000008279	-	100	72.252	ENSDORG00000024034	-	100	69.370	Dipodomys_ordii
ENSPEMG00000008279	-	71	68.301	ENSETEG00000013005	-	84	67.190	Echinops_telfairi
ENSPEMG00000008279	-	100	78.767	ENSEASG00005016297	RBM12B	100	78.767	Equus_asinus_asinus
ENSPEMG00000008279	-	100	75.989	ENSECAG00000017870	RBM12B	100	67.963	Equus_caballus
ENSPEMG00000008279	-	100	78.753	ENSFCAG00000029274	RBM12B	100	78.753	Felis_catus
ENSPEMG00000008279	-	84	57.718	ENSFALG00000014893	RBM12B	100	57.718	Ficedula_albicollis
ENSPEMG00000008279	-	100	73.679	ENSFDAG00000005576	RBM12B	97	70.613	Fukomys_damarensis
ENSPEMG00000008279	-	69	46.739	ENSFHEG00000016425	rbm12b	87	46.739	Fundulus_heteroclitus
ENSPEMG00000008279	-	68	48.000	ENSGMOG00000013467	rbm12b	90	48.000	Gadus_morhua
ENSPEMG00000008279	-	84	60.403	ENSGALG00000035129	RBM12B	100	60.403	Gallus_gallus
ENSPEMG00000008279	-	67	49.351	ENSGAFG00000007224	rbm12b	86	49.351	Gambusia_affinis
ENSPEMG00000008279	-	67	48.052	ENSGACG00000008682	rbm12b	85	48.052	Gasterosteus_aculeatus
ENSPEMG00000008279	-	84	60.284	ENSGAGG00000009774	RBM12B	100	60.284	Gopherus_agassizii
ENSPEMG00000008279	-	100	79.110	ENSGGOG00000011909	RBM12B	100	79.110	Gorilla_gorilla
ENSPEMG00000008279	-	67	48.052	ENSHBUG00000016227	rbm12b	84	48.052	Haplochromis_burtoni
ENSPEMG00000008279	-	100	72.453	ENSHGLG00000009063	RBM12B	100	67.568	Heterocephalus_glaber_female
ENSPEMG00000008279	-	100	72.453	ENSHGLG00100021324	RBM12B	100	67.568	Heterocephalus_glaber_male
ENSPEMG00000008279	-	67	49.351	ENSHCOG00000014952	rbm12b	90	49.351	Hippocampus_comes
ENSPEMG00000008279	-	78	40.039	ENSIPUG00000001167	RBM12B	95	40.039	Ictalurus_punctatus
ENSPEMG00000008279	-	100	80.769	ENSSTOG00000027445	RBM12B	100	80.886	Ictidomys_tridecemlineatus
ENSPEMG00000008279	-	100	76.417	ENSJJAG00000004165	-	100	74.915	Jaculus_jaculus
ENSPEMG00000008279	-	77	39.468	ENSKMAG00000013704	rbm12b	96	39.264	Kryptolebias_marmoratus
ENSPEMG00000008279	-	77	38.855	ENSKMAG00000013715	rbm12b	99	38.650	Kryptolebias_marmoratus
ENSPEMG00000008279	-	75	55.856	ENSLACG00000007177	RBM12B	98	55.856	Latimeria_chalumnae
ENSPEMG00000008279	-	67	54.545	ENSLOCG00000018344	rbm12b	86	54.545	Lepisosteus_oculatus
ENSPEMG00000008279	-	100	74.091	ENSLAFG00000029949	RBM12B	100	74.091	Loxodonta_africana
ENSPEMG00000008279	-	100	77.970	ENSMFAG00000045430	RBM12B	100	74.041	Macaca_fascicularis
ENSPEMG00000008279	-	100	78.571	ENSMMUG00000005558	RBM12B	100	78.118	Macaca_mulatta
ENSPEMG00000008279	-	100	77.970	ENSMNEG00000041292	RBM12B	100	74.041	Macaca_nemestrina
ENSPEMG00000008279	-	100	78.256	ENSMLEG00000037288	RBM12B	100	78.256	Mandrillus_leucophaeus
ENSPEMG00000008279	-	70	44.660	ENSMAMG00000011998	rbm12b	90	44.660	Mastacembelus_armatus
ENSPEMG00000008279	-	57	31.122	ENSMAMG00000012038	zgc:153215	94	31.122	Mastacembelus_armatus
ENSPEMG00000008279	-	67	48.052	ENSMZEG00005014845	rbm12b	85	47.297	Maylandia_zebra
ENSPEMG00000008279	-	67	48.052	ENSMZEG00005015005	rbm12b	86	48.052	Maylandia_zebra
ENSPEMG00000008279	-	58	58.447	ENSMGAG00000011985	RBM12B	99	57.864	Meleagris_gallopavo
ENSPEMG00000008279	-	100	92.993	ENSMAUG00000021752	-	100	92.993	Mesocricetus_auratus
ENSPEMG00000008279	-	100	78.555	ENSMICG00000036969	RBM12B	100	78.904	Microcebus_murinus
ENSPEMG00000008279	-	100	88.256	ENSMOCG00000005603	-	100	88.256	Microtus_ochrogaster
ENSPEMG00000008279	-	77	38.889	ENSMMOG00000002404	rbm12b	94	38.889	Mola_mola
ENSPEMG00000008279	-	100	57.706	ENSMODG00000007436	RBM12B	98	57.541	Monodelphis_domestica
ENSPEMG00000008279	-	73	50.000	ENSMALG00000012059	rbm12b	91	50.000	Monopterus_albus
ENSPEMG00000008279	-	100	80.118	ENSMUSG00000046667	Rbm12b1	100	80.118	Mus_musculus
ENSPEMG00000008279	-	100	79.647	ENSMUSG00000052137	Rbm12b2	100	79.647	Mus_musculus
ENSPEMG00000008279	-	100	80.118	MGP_SPRETEiJ_G0026766	-	100	80.118	Mus_spretus
ENSPEMG00000008279	-	100	73.139	MGP_SPRETEiJ_G0026765	-	100	71.444	Mus_spretus
ENSPEMG00000008279	-	100	75.469	ENSMPUG00000018637	RBM12B	100	63.745	Mustela_putorius_furo
ENSPEMG00000008279	-	100	68.172	ENSMLUG00000002359	RBM12B	100	68.067	Myotis_lucifugus
ENSPEMG00000008279	-	100	75.459	ENSNGAG00000002801	-	100	73.189	Nannospalax_galili
ENSPEMG00000008279	-	67	48.052	ENSNBRG00000015057	rbm12b	86	48.052	Neolamprologus_brichardi
ENSPEMG00000008279	-	100	78.418	ENSNLEG00000032050	RBM12B	100	78.418	Nomascus_leucogenys
ENSPEMG00000008279	-	100	71.983	ENSODEG00000019204	RBM12B	100	71.039	Octodon_degus
ENSPEMG00000008279	-	67	48.052	ENSONIG00000020612	rbm12b	86	48.052	Oreochromis_niloticus
ENSPEMG00000008279	-	85	65.772	ENSOANG00000015735	-	97	65.772	Ornithorhynchus_anatinus
ENSPEMG00000008279	-	100	78.071	ENSOCUG00000010353	RBM12B	100	78.071	Oryctolagus_cuniculus
ENSPEMG00000008279	-	67	51.948	ENSORLG00000008228	rbm12b	83	51.948	Oryzias_latipes
ENSPEMG00000008279	-	67	51.948	ENSORLG00020013619	rbm12b	83	51.948	Oryzias_latipes_hni
ENSPEMG00000008279	-	67	51.948	ENSORLG00015019999	rbm12b	83	51.948	Oryzias_latipes_hsok
ENSPEMG00000008279	-	67	51.948	ENSOMEG00000022523	rbm12b	83	51.948	Oryzias_melastigma
ENSPEMG00000008279	-	100	69.200	ENSOGAG00000002979	RBM12B	100	74.069	Otolemur_garnettii
ENSPEMG00000008279	-	100	78.662	ENSPTIG00000020071	RBM12B	100	77.393	Panthera_tigris_altaica
ENSPEMG00000008279	-	100	77.778	ENSPTRG00000020420	RBM12B	100	76.871	Pan_troglodytes
ENSPEMG00000008279	-	100	78.482	ENSPANG00000035535	RBM12B	100	78.482	Papio_anubis
ENSPEMG00000008279	-	57	32.233	ENSPKIG00000014851	zgc:153215	98	32.233	Paramormyrops_kingsleyae
ENSPEMG00000008279	-	67	50.649	ENSPKIG00000018719	rbm12b	85	50.649	Paramormyrops_kingsleyae
ENSPEMG00000008279	-	83	59.859	ENSPSIG00000001348	RBM12B	100	59.859	Pelodiscus_sinensis
ENSPEMG00000008279	-	100	57.209	ENSPCIG00000008556	RBM12B	100	57.889	Phascolarctos_cinereus
ENSPEMG00000008279	-	51	51.190	ENSPFOG00000017451	zgc:153215	67	51.190	Poecilia_formosa
ENSPEMG00000008279	-	68	46.237	ENSPFOG00000020937	rbm12b	85	46.237	Poecilia_formosa
ENSPEMG00000008279	-	68	46.237	ENSPLAG00000018782	rbm12b	88	46.237	Poecilia_latipinna
ENSPEMG00000008279	-	68	46.237	ENSPMEG00000011418	rbm12b	88	46.237	Poecilia_mexicana
ENSPEMG00000008279	-	68	46.237	ENSPREG00000020770	rbm12b	88	46.237	Poecilia_reticulata
ENSPEMG00000008279	-	100	75.101	ENSPPYG00000018745	RBM12B	100	75.101	Pongo_abelii
ENSPEMG00000008279	-	100	79.381	ENSPCOG00000023546	RBM12B	100	79.381	Propithecus_coquereli
ENSPEMG00000008279	-	100	73.089	ENSPVAG00000011803	RBM12B	100	68.421	Pteropus_vampyrus
ENSPEMG00000008279	-	67	48.052	ENSPNYG00000016696	rbm12b	86	48.052	Pundamilia_nyererei
ENSPEMG00000008279	-	67	51.948	ENSPNAG00000008126	rbm12b	84	51.948	Pygocentrus_nattereri
ENSPEMG00000008279	-	57	30.991	ENSPNAG00000025628	zgc:153215	77	57.143	Pygocentrus_nattereri
ENSPEMG00000008279	-	100	80.047	ENSRNOG00000016330	Rbm12b	100	80.047	Rattus_norvegicus
ENSPEMG00000008279	-	88	80.265	ENSRNOG00000055292	LOC679087	100	80.265	Rattus_norvegicus
ENSPEMG00000008279	-	100	79.252	ENSRBIG00000035046	RBM12B	100	79.138	Rhinopithecus_bieti
ENSPEMG00000008279	-	100	78.246	ENSRROG00000023660	RBM12B	100	78.246	Rhinopithecus_roxellana
ENSPEMG00000008279	-	100	77.149	ENSSBOG00000027592	RBM12B	100	77.262	Saimiri_boliviensis_boliviensis
ENSPEMG00000008279	-	100	61.385	ENSSHAG00000015335	RBM12B	100	57.193	Sarcophilus_harrisii
ENSPEMG00000008279	-	57	34.791	ENSSFOG00015009427	zgc:153215	99	34.592	Scleropages_formosus
ENSPEMG00000008279	-	67	49.351	ENSSFOG00015001584	rbm12b	86	49.351	Scleropages_formosus
ENSPEMG00000008279	-	67	49.351	ENSSMAG00000019708	rbm12b	86	49.351	Scophthalmus_maximus
ENSPEMG00000008279	-	73	41.650	ENSSDUG00000006856	rbm12b	95	41.765	Seriola_dumerili
ENSPEMG00000008279	-	57	50.000	ENSSLDG00000013581	zgc:153215	75	50.000	Seriola_lalandi_dorsalis
ENSPEMG00000008279	-	67	49.351	ENSSLDG00000016156	rbm12b	86	49.351	Seriola_lalandi_dorsalis
ENSPEMG00000008279	-	73	73.710	ENSSARG00000011845	-	84	73.710	Sorex_araneus
ENSPEMG00000008279	-	58	54.932	ENSSPUG00000016954	RBM12B	91	54.545	Sphenodon_punctatus
ENSPEMG00000008279	-	77	38.583	ENSSPAG00000006774	rbm12b	100	38.735	Stegastes_partitus
ENSPEMG00000008279	-	100	75.272	ENSSSCG00000006110	RBM12B	100	75.272	Sus_scrofa
ENSPEMG00000008279	-	60	54.951	ENSTGUG00000011860	RBM12B	100	54.951	Taeniopygia_guttata
ENSPEMG00000008279	-	67	49.351	ENSTRUG00000013738	rbm12b	86	49.351	Takifugu_rubripes
ENSPEMG00000008279	-	74	77.044	ENSTBEG00000000449	RBM12B	82	77.044	Tupaia_belangeri
ENSPEMG00000008279	-	100	77.376	ENSUAMG00000023639	RBM12B	100	77.376	Ursus_americanus
ENSPEMG00000008279	-	100	74.215	ENSUMAG00000016008	RBM12B	100	73.348	Ursus_maritimus
ENSPEMG00000008279	-	95	88.014	ENSVPAG00000001080	RBM12B	90	88.014	Vicugna_pacos
ENSPEMG00000008279	-	100	77.029	ENSVVUG00000002694	RBM12B	100	76.800	Vulpes_vulpes
ENSPEMG00000008279	-	87	44.957	ENSXETG00000014694	rbm12b	100	47.347	Xenopus_tropicalis
ENSPEMG00000008279	-	65	37.230	ENSXETG00000014696	rbm12b	77	37.230	Xenopus_tropicalis
ENSPEMG00000008279	-	68	46.237	ENSXMAG00000014213	rbm12b	88	46.237	Xiphophorus_maculatus