EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: ENSPEMG00000008458 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Peromyscus_maniculatus_bairdii
Status: putative
Strand: Minus strand
Length: 1142 bases
Position: chrKI616305.1:897833-898974
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPEMP00000006151	RRM_1	PF00076.22	1.6e-31	1	2
ENSPEMP00000006151	RRM_1	PF00076.22	1.6e-31	2	2
ENSPEMP00000006154	RRM_1	PF00076.22	2.8e-31	1	2
ENSPEMP00000006154	RRM_1	PF00076.22	2.8e-31	2	2
ENSPEMP00000006154	HnRNPA1	PF11627.8	2.5e-15	1	1
ENSPEMP00000006151	HnRNPA1	PF11627.8	2.5e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPEMT00000010262	-	1074	-	ENSPEMP00000006151	357 (aa)	-	-
ENSPEMT00000010265	-	1068	-	ENSPEMP00000006154	355 (aa)	-	-

Gene Model

Click here to download ENSPEMG00000008458's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPEMG00000008458's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPEMG00000008458	-	84	70.455	ENSPEMG00000008607	-	82	44.407
ENSPEMG00000008458	-	83	57.329	ENSPEMG00000014384	Hnrnpa2b1	60	74.444
ENSPEMG00000008458	-	50	90.860	ENSPEMG00000021885	Hnrnpa3	52	91.848
ENSPEMG00000008458	-	71	48.106	ENSPEMG00000020274	Hnrnpa0	81	55.307
ENSPEMG00000008458	-	54	86.070	ENSPEMG00000018087	-	53	89.247