EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPEMG00000008502 (Gene tree)
Gene ID: -
Gene Symbol: Zc3h12c
Alias: -
Full Name: zinc finger CCCH type containing 12C
Gene Type: protein_coding
Species: Peromyscus_maniculatus_bairdii
Status: putative
Strand: Plus strand
Length: 65113 bases
Position: chrKI615338.1:1928619-1993731
Accession: 3026959
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPEMP00000006231	RNase_Zc3h12a	PF11977.8	3.3e-40	1	1
ENSPEMP00000006224	RNase_Zc3h12a	PF11977.8	5.5e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPEMT00000010342	-	2547	-	ENSPEMP00000006231	848 (aa)	-	-
ENSPEMT00000010335	-	2361	-	ENSPEMP00000006224	786 (aa)	-	-

Gene Model

Click here to download ENSPEMG00000008502's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPEMG00000008502's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPEMG00000008502	Zc3h12c	89	48.986	ENSPEMG00000011878	Zc3h12b	99	46.580

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPEMG00000008502	Zc3h12c	97	93.548	ENSG00000149289	ZC3H12C	100	84.977	Homo_sapiens
ENSPEMG00000008502	Zc3h12c	97	93.333	ENSAMEG00000009188	ZC3H12C	91	93.333	Ailuropoda_melanoleuca
ENSPEMG00000008502	Zc3h12c	65	84.335	ENSAPLG00000002854	ZC3H12C	100	78.240	Anas_platyrhynchos
ENSPEMG00000008502	Zc3h12c	97	83.656	ENSACAG00000001031	ZC3H12C	97	75.199	Anolis_carolinensis
ENSPEMG00000008502	Zc3h12c	97	94.194	ENSANAG00000026999	ZC3H12C	91	94.194	Aotus_nancymaae
ENSPEMG00000008502	Zc3h12c	97	90.773	ENSBTAG00000008732	ZC3H12C	99	83.808	Bos_taurus
ENSPEMG00000008502	Zc3h12c	97	93.763	ENSCJAG00000010319	ZC3H12C	91	93.763	Callithrix_jacchus
ENSPEMG00000008502	Zc3h12c	97	86.481	ENSCAFG00000014297	ZC3H12C	99	81.435	Canis_familiaris
ENSPEMG00000008502	Zc3h12c	97	86.481	ENSCAFG00020006999	ZC3H12C	99	80.882	Canis_lupus_dingo
ENSPEMG00000008502	Zc3h12c	97	91.202	ENSCHIG00000021221	ZC3H12C	99	83.579	Capra_hircus
ENSPEMG00000008502	Zc3h12c	88	88.066	ENSTSYG00000005412	ZC3H12C	99	80.215	Carlito_syrichta
ENSPEMG00000008502	Zc3h12c	97	90.108	ENSCAPG00000011610	ZC3H12C	91	90.108	Cavia_aperea
ENSPEMG00000008502	Zc3h12c	97	90.108	ENSCPOG00000032962	ZC3H12C	91	90.108	Cavia_porcellus
ENSPEMG00000008502	Zc3h12c	97	93.978	ENSCCAG00000022395	ZC3H12C	100	85.798	Cebus_capucinus
ENSPEMG00000008502	Zc3h12c	97	93.763	ENSCATG00000041641	ZC3H12C	91	93.763	Cercocebus_atys
ENSPEMG00000008502	Zc3h12c	97	94.194	ENSCLAG00000012577	ZC3H12C	100	85.446	Chinchilla_lanigera
ENSPEMG00000008502	Zc3h12c	97	93.118	ENSCSAG00000002945	ZC3H12C	99	84.361	Chlorocebus_sabaeus
ENSPEMG00000008502	Zc3h12c	91	93.333	ENSCHOG00000013202	-	99	78.246	Choloepus_hoffmanni
ENSPEMG00000008502	Zc3h12c	97	85.376	ENSCPBG00000021043	ZC3H12C	100	76.869	Chrysemys_picta_bellii
ENSPEMG00000008502	Zc3h12c	97	93.548	ENSCANG00000040994	ZC3H12C	91	93.548	Colobus_angolensis_palliatus
ENSPEMG00000008502	Zc3h12c	100	97.204	ENSCGRG00001013672	Zc3h12c	99	89.954	Cricetulus_griseus_chok1gshd
ENSPEMG00000008502	Zc3h12c	100	97.204	ENSCGRG00000001308	Zc3h12c	91	97.204	Cricetulus_griseus_crigri
ENSPEMG00000008502	Zc3h12c	97	91.613	ENSDNOG00000013040	ZC3H12C	99	82.747	Dasypus_novemcinctus
ENSPEMG00000008502	Zc3h12c	97	93.763	ENSDORG00000009134	Zc3h12c	91	93.763	Dipodomys_ordii
ENSPEMG00000008502	Zc3h12c	65	92.688	ENSETEG00000008027	ZC3H12C	100	84.480	Echinops_telfairi
ENSPEMG00000008502	Zc3h12c	97	94.194	ENSEASG00005010098	ZC3H12C	90	94.194	Equus_asinus_asinus
ENSPEMG00000008502	Zc3h12c	98	94.194	ENSECAG00000000462	ZC3H12C	91	94.194	Equus_caballus
ENSPEMG00000008502	Zc3h12c	58	92.457	ENSEEUG00000005709	-	100	83.187	Erinaceus_europaeus
ENSPEMG00000008502	Zc3h12c	97	89.892	ENSFCAG00000010665	ZC3H12C	99	83.105	Felis_catus
ENSPEMG00000008502	Zc3h12c	97	83.441	ENSFALG00000008776	ZC3H12C	99	76.050	Ficedula_albicollis
ENSPEMG00000008502	Zc3h12c	98	94.409	ENSFDAG00000017997	ZC3H12C	100	85.915	Fukomys_damarensis
ENSPEMG00000008502	Zc3h12c	94	83.226	ENSGALG00000017154	ZC3H12C	100	75.963	Gallus_gallus
ENSPEMG00000008502	Zc3h12c	91	83.933	ENSGAGG00000024154	ZC3H12C	78	83.933	Gopherus_agassizii
ENSPEMG00000008502	Zc3h12c	97	93.763	ENSGGOG00000010117	ZC3H12C	91	93.763	Gorilla_gorilla
ENSPEMG00000008502	Zc3h12c	98	93.763	ENSHGLG00000019021	ZC3H12C	99	85.502	Heterocephalus_glaber_female
ENSPEMG00000008502	Zc3h12c	98	93.763	ENSHGLG00100007295	ZC3H12C	99	85.502	Heterocephalus_glaber_male
ENSPEMG00000008502	Zc3h12c	99	95.699	ENSSTOG00000022143	ZC3H12C	100	87.671	Ictidomys_tridecemlineatus
ENSPEMG00000008502	Zc3h12c	98	95.054	ENSJJAG00000001147	Zc3h12c	100	87.443	Jaculus_jaculus
ENSPEMG00000008502	Zc3h12c	97	71.855	ENSLACG00000009305	ZC3H12C	99	66.742	Latimeria_chalumnae
ENSPEMG00000008502	Zc3h12c	65	93.548	ENSLAFG00000016296	ZC3H12C	100	85.008	Loxodonta_africana
ENSPEMG00000008502	Zc3h12c	97	93.763	ENSMFAG00000042068	ZC3H12C	91	93.763	Macaca_fascicularis
ENSPEMG00000008502	Zc3h12c	97	93.763	ENSMMUG00000048435	ZC3H12C	91	93.763	Macaca_mulatta
ENSPEMG00000008502	Zc3h12c	97	93.763	ENSMNEG00000032663	ZC3H12C	100	84.977	Macaca_nemestrina
ENSPEMG00000008502	Zc3h12c	97	93.763	ENSMLEG00000032083	ZC3H12C	91	93.763	Mandrillus_leucophaeus
ENSPEMG00000008502	Zc3h12c	97	82.581	ENSMGAG00000015143	ZC3H12C	99	74.943	Meleagris_gallopavo
ENSPEMG00000008502	Zc3h12c	100	96.344	ENSMAUG00000020412	Zc3h12c	99	89.168	Mesocricetus_auratus
ENSPEMG00000008502	Zc3h12c	97	95.054	ENSMICG00000011455	ZC3H12C	100	86.268	Microcebus_murinus
ENSPEMG00000008502	Zc3h12c	100	96.129	ENSMOCG00000020090	Zc3h12c	99	89.384	Microtus_ochrogaster
ENSPEMG00000008502	Zc3h12c	94	89.032	ENSMODG00000014555	ZC3H12C	100	80.724	Monodelphis_domestica
ENSPEMG00000008502	Zc3h12c	100	95.054	MGP_CAROLIEiJ_G0032210	Zc3h12c	100	86.756	Mus_caroli
ENSPEMG00000008502	Zc3h12c	100	95.269	ENSMUSG00000035164	Zc3h12c	100	87.093	Mus_musculus
ENSPEMG00000008502	Zc3h12c	100	95.484	MGP_PahariEiJ_G0015078	Zc3h12c	100	86.532	Mus_pahari
ENSPEMG00000008502	Zc3h12c	100	95.269	MGP_SPRETEiJ_G0033350	Zc3h12c	100	86.869	Mus_spretus
ENSPEMG00000008502	Zc3h12c	100	89.247	ENSMPUG00000005888	ZC3H12C	91	89.247	Mustela_putorius_furo
ENSPEMG00000008502	Zc3h12c	97	91.828	ENSMLUG00000017189	ZC3H12C	100	84.361	Myotis_lucifugus
ENSPEMG00000008502	Zc3h12c	99	96.559	ENSNGAG00000023957	Zc3h12c	91	96.559	Nannospalax_galili
ENSPEMG00000008502	Zc3h12c	97	93.548	ENSNLEG00000029829	ZC3H12C	91	93.548	Nomascus_leucogenys
ENSPEMG00000008502	Zc3h12c	97	89.462	ENSMEUG00000015398	ZC3H12C	100	77.247	Notamacropus_eugenii
ENSPEMG00000008502	Zc3h12c	66	78.065	ENSOPRG00000003370	-	96	73.217	Ochotona_princeps
ENSPEMG00000008502	Zc3h12c	97	93.548	ENSODEG00000011026	ZC3H12C	91	93.548	Octodon_degus
ENSPEMG00000008502	Zc3h12c	66	79.274	ENSOANG00000006242	-	99	74.209	Ornithorhynchus_anatinus
ENSPEMG00000008502	Zc3h12c	97	94.194	ENSOCUG00000005283	ZC3H12C	91	94.194	Oryctolagus_cuniculus
ENSPEMG00000008502	Zc3h12c	97	92.275	ENSOGAG00000013223	ZC3H12C	99	84.738	Otolemur_garnettii
ENSPEMG00000008502	Zc3h12c	97	82.366	ENSOARG00000012999	ZC3H12C	97	83.422	Ovis_aries
ENSPEMG00000008502	Zc3h12c	97	93.763	ENSPPAG00000041914	ZC3H12C	91	93.763	Pan_paniscus
ENSPEMG00000008502	Zc3h12c	97	89.462	ENSPPRG00000006582	ZC3H12C	99	82.877	Panthera_pardus
ENSPEMG00000008502	Zc3h12c	85	84.034	ENSPTIG00000009995	ZC3H12C	99	84.034	Panthera_tigris_altaica
ENSPEMG00000008502	Zc3h12c	97	93.763	ENSPTRG00000050494	ZC3H12C	91	93.763	Pan_troglodytes
ENSPEMG00000008502	Zc3h12c	97	93.763	ENSPANG00000023930	ZC3H12C	91	93.763	Papio_anubis
ENSPEMG00000008502	Zc3h12c	94	84.946	ENSPSIG00000005959	ZC3H12C	86	84.946	Pelodiscus_sinensis
ENSPEMG00000008502	Zc3h12c	94	88.602	ENSPCIG00000022169	ZC3H12C	100	80.374	Phascolarctos_cinereus
ENSPEMG00000008502	Zc3h12c	94	93.333	ENSPPYG00000003851	ZC3H12C	100	84.859	Pongo_abelii
ENSPEMG00000008502	Zc3h12c	58	91.883	ENSPCAG00000015682	ZC3H12C	100	83.684	Procavia_capensis
ENSPEMG00000008502	Zc3h12c	97	95.269	ENSPCOG00000024737	ZC3H12C	91	95.269	Propithecus_coquereli
ENSPEMG00000008502	Zc3h12c	97	91.845	ENSPVAG00000014329	ZC3H12C	91	91.845	Pteropus_vampyrus
ENSPEMG00000008502	Zc3h12c	100	95.699	ENSRNOG00000012470	Zc3h12c	100	87.318	Rattus_norvegicus
ENSPEMG00000008502	Zc3h12c	97	93.763	ENSRBIG00000040441	ZC3H12C	91	93.763	Rhinopithecus_bieti
ENSPEMG00000008502	Zc3h12c	97	93.763	ENSRROG00000004335	ZC3H12C	91	93.763	Rhinopithecus_roxellana
ENSPEMG00000008502	Zc3h12c	97	93.978	ENSSBOG00000025582	ZC3H12C	100	85.798	Saimiri_boliviensis_boliviensis
ENSPEMG00000008502	Zc3h12c	94	89.032	ENSSHAG00000005597	ZC3H12C	100	80.374	Sarcophilus_harrisii
ENSPEMG00000008502	Zc3h12c	65	93.978	ENSSARG00000003433	ZC3H12C	100	85.646	Sorex_araneus
ENSPEMG00000008502	Zc3h12c	97	85.591	ENSSPUG00000001832	ZC3H12C	91	85.591	Sphenodon_punctatus
ENSPEMG00000008502	Zc3h12c	97	93.348	ENSSSCG00000015014	ZC3H12C	100	85.111	Sus_scrofa
ENSPEMG00000008502	Zc3h12c	67	82.495	ENSTGUG00000011244	ZC3H12C	100	77.031	Taeniopygia_guttata
ENSPEMG00000008502	Zc3h12c	97	93.118	ENSTTRG00000005096	ZC3H12C	100	85.274	Tursiops_truncatus
ENSPEMG00000008502	Zc3h12c	97	93.763	ENSUAMG00000006051	ZC3H12C	99	85.549	Ursus_americanus
ENSPEMG00000008502	Zc3h12c	97	93.763	ENSUMAG00000007283	ZC3H12C	99	85.227	Ursus_maritimus
ENSPEMG00000008502	Zc3h12c	84	87.742	ENSVPAG00000003110	ZC3H12C	88	80.640	Vicugna_pacos
ENSPEMG00000008502	Zc3h12c	96	67.164	ENSXETG00000033837	ZC3H12C	100	62.921	Xenopus_tropicalis