EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPEMG00000008872 (Gene tree)
Gene ID: 102919448
Gene Symbol: Snrnp48
Alias: -
Full Name: small nuclear ribonucleoprotein U11/U12 subunit 48
Gene Type: protein_coding
Species: Peromyscus_maniculatus_bairdii
Status: putative
Strand: Plus strand
Length: 23392 bases
Position: chrKI615343.1:2370729-2394120
Accession: 102919448
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPEMP00000006743	zf-U11-48K	PF05253.12	1.8e-08	1	1
ENSPEMP00000006736	zf-U11-48K	PF05253.12	2.5e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPEMT00000010863	-	1175	XM_006972780	ENSPEMP00000006736	337 (aa)	XP_006972842	UPI00042AC90F
ENSPEMT00000010870	-	819	-	ENSPEMP00000006743	272 (aa)	-	-

Gene Model

Click here to download ENSPEMG00000008872's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPEMG00000008872's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPEMG00000008872	Snrnp48	100	89.691	ENSG00000168566	SNRNP48	100	89.086	Homo_sapiens
ENSPEMG00000008872	Snrnp48	82	48.944	ENSAPOG00000021430	snrnp48	96	44.606	Acanthochromis_polyacanthus
ENSPEMG00000008872	Snrnp48	99	86.517	ENSAMEG00000017349	SNRNP48	100	85.879	Ailuropoda_melanoleuca
ENSPEMG00000008872	Snrnp48	89	45.215	ENSACIG00000002032	snrnp48	96	42.730	Amphilophus_citrinellus
ENSPEMG00000008872	Snrnp48	82	48.944	ENSAOCG00000010562	snrnp48	96	44.669	Amphiprion_ocellaris
ENSPEMG00000008872	Snrnp48	82	48.936	ENSAPEG00000003231	snrnp48	96	44.638	Amphiprion_percula
ENSPEMG00000008872	Snrnp48	77	50.000	ENSATEG00000020210	snrnp48	92	46.057	Anabas_testudineus
ENSPEMG00000008872	Snrnp48	82	64.931	ENSACAG00000002811	SNRNP48	89	64.931	Anolis_carolinensis
ENSPEMG00000008872	Snrnp48	100	88.791	ENSANAG00000033538	SNRNP48	100	89.086	Aotus_nancymaae
ENSPEMG00000008872	Snrnp48	93	45.963	ENSAMXG00000015309	snrnp48	97	44.412	Astyanax_mexicanus
ENSPEMG00000008872	Snrnp48	100	83.529	ENSBTAG00000001123	SNRNP48	100	84.412	Bos_taurus
ENSPEMG00000008872	Snrnp48	100	87.906	ENSCJAG00000021330	SNRNP48	100	88.791	Callithrix_jacchus
ENSPEMG00000008872	Snrnp48	99	88.393	ENSCAFG00000009574	SNRNP48	83	88.427	Canis_familiaris
ENSPEMG00000008872	Snrnp48	99	88.427	ENSCAFG00020013203	SNRNP48	99	88.724	Canis_lupus_dingo
ENSPEMG00000008872	Snrnp48	100	85.000	ENSCHIG00000015216	SNRNP48	100	85.882	Capra_hircus
ENSPEMG00000008872	Snrnp48	100	87.316	ENSTSYG00000000698	SNRNP48	100	88.201	Carlito_syrichta
ENSPEMG00000008872	Snrnp48	91	82.410	ENSCAPG00000006768	SNRNP48	100	82.410	Cavia_aperea
ENSPEMG00000008872	Snrnp48	100	85.841	ENSCPOG00000007910	SNRNP48	100	85.841	Cavia_porcellus
ENSPEMG00000008872	Snrnp48	100	87.906	ENSCCAG00000035652	SNRNP48	100	88.201	Cebus_capucinus
ENSPEMG00000008872	Snrnp48	100	88.660	ENSCATG00000033947	SNRNP48	100	88.496	Cercocebus_atys
ENSPEMG00000008872	Snrnp48	100	86.431	ENSCLAG00000003765	SNRNP48	100	87.316	Chinchilla_lanigera
ENSPEMG00000008872	Snrnp48	100	89.691	ENSCSAG00000007409	SNRNP48	100	89.086	Chlorocebus_sabaeus
ENSPEMG00000008872	Snrnp48	85	64.570	ENSCPBG00000019146	SNRNP48	92	64.570	Chrysemys_picta_bellii
ENSPEMG00000008872	Snrnp48	94	30.841	ENSCING00000004121	-	97	30.120	Ciona_intestinalis
ENSPEMG00000008872	Snrnp48	100	89.691	ENSCANG00000030017	SNRNP48	100	89.086	Colobus_angolensis_palliatus
ENSPEMG00000008872	Snrnp48	100	98.947	ENSCGRG00001001076	-	100	97.329	Cricetulus_griseus_chok1gshd
ENSPEMG00000008872	Snrnp48	99	76.276	ENSCGRG00001008805	-	95	75.075	Cricetulus_griseus_chok1gshd
ENSPEMG00000008872	Snrnp48	100	98.947	ENSCGRG00000007781	Snrnp48	100	97.329	Cricetulus_griseus_crigri
ENSPEMG00000008872	Snrnp48	77	48.669	ENSCSEG00000000722	snrnp48	72	48.669	Cynoglossus_semilaevis
ENSPEMG00000008872	Snrnp48	95	44.880	ENSCVAG00000019829	snrnp48	93	42.077	Cyprinodon_variegatus
ENSPEMG00000008872	Snrnp48	82	45.775	ENSDARG00000039989	snrnp48	96	43.284	Danio_rerio
ENSPEMG00000008872	Snrnp48	99	86.567	ENSDNOG00000014978	SNRNP48	99	87.164	Dasypus_novemcinctus
ENSPEMG00000008872	Snrnp48	99	86.726	ENSDORG00000015140	Snrnp48	100	86.471	Dipodomys_ordii
ENSPEMG00000008872	Snrnp48	68	34.031	ENSEBUG00000016376	-	89	33.178	Eptatretus_burgeri
ENSPEMG00000008872	Snrnp48	99	88.166	ENSEASG00005012021	SNRNP48	100	88.201	Equus_asinus_asinus
ENSPEMG00000008872	Snrnp48	100	88.791	ENSECAG00000026937	SNRNP48	100	89.086	Equus_caballus
ENSPEMG00000008872	Snrnp48	100	80.412	ENSEEUG00000015437	SNRNP48	99	66.962	Erinaceus_europaeus
ENSPEMG00000008872	Snrnp48	88	46.885	ENSELUG00000009766	snrnp48	78	48.057	Esox_lucius
ENSPEMG00000008872	Snrnp48	100	88.791	ENSFCAG00000018853	SNRNP48	100	89.086	Felis_catus
ENSPEMG00000008872	Snrnp48	83	64.041	ENSFALG00000007797	SNRNP48	93	64.726	Ficedula_albicollis
ENSPEMG00000008872	Snrnp48	99	84.615	ENSFDAG00000009231	SNRNP48	100	86.136	Fukomys_damarensis
ENSPEMG00000008872	Snrnp48	59	56.931	ENSFHEG00000014647	snrnp48	97	47.297	Fundulus_heteroclitus
ENSPEMG00000008872	Snrnp48	73	47.581	ENSGMOG00000018599	-	81	47.191	Gadus_morhua
ENSPEMG00000008872	Snrnp48	76	66.792	ENSGALG00000013005	SNRNP48	90	66.792	Gallus_gallus
ENSPEMG00000008872	Snrnp48	95	43.235	ENSGAFG00000021639	snrnp48	94	44.745	Gambusia_affinis
ENSPEMG00000008872	Snrnp48	74	49.801	ENSGACG00000017756	-	96	45.593	Gasterosteus_aculeatus
ENSPEMG00000008872	Snrnp48	84	63.667	ENSGAGG00000000865	SNRNP48	97	63.667	Gopherus_agassizii
ENSPEMG00000008872	Snrnp48	100	89.691	ENSGGOG00000013220	SNRNP48	100	89.086	Gorilla_gorilla
ENSPEMG00000008872	Snrnp48	75	48.828	ENSHBUG00000017066	snrnp48	95	42.982	Haplochromis_burtoni
ENSPEMG00000008872	Snrnp48	99	86.095	ENSHGLG00000015241	SNRNP48	100	86.726	Heterocephalus_glaber_female
ENSPEMG00000008872	Snrnp48	99	86.095	ENSHGLG00100010027	SNRNP48	100	86.726	Heterocephalus_glaber_male
ENSPEMG00000008872	Snrnp48	72	47.561	ENSHCOG00000014066	snrnp48	92	41.983	Hippocampus_comes
ENSPEMG00000008872	Snrnp48	100	91.445	ENSSTOG00000014635	SNRNP48	100	92.330	Ictidomys_tridecemlineatus
ENSPEMG00000008872	Snrnp48	100	86.431	ENSJJAG00000011495	Snrnp48	100	86.726	Jaculus_jaculus
ENSPEMG00000008872	Snrnp48	91	45.130	ENSKMAG00000016514	snrnp48	94	43.235	Kryptolebias_marmoratus
ENSPEMG00000008872	Snrnp48	77	47.510	ENSLBEG00000026249	snrnp48	95	43.149	Labrus_bergylta
ENSPEMG00000008872	Snrnp48	98	54.030	ENSLACG00000003958	SNRNP48	99	52.907	Latimeria_chalumnae
ENSPEMG00000008872	Snrnp48	84	52.249	ENSLOCG00000004187	snrnp48	95	49.555	Lepisosteus_oculatus
ENSPEMG00000008872	Snrnp48	100	84.071	ENSLAFG00000011152	SNRNP48	100	84.956	Loxodonta_africana
ENSPEMG00000008872	Snrnp48	100	89.691	ENSMFAG00000045216	SNRNP48	100	89.381	Macaca_fascicularis
ENSPEMG00000008872	Snrnp48	100	89.691	ENSMMUG00000014785	SNRNP48	100	89.381	Macaca_mulatta
ENSPEMG00000008872	Snrnp48	100	89.691	ENSMNEG00000042269	SNRNP48	100	89.086	Macaca_nemestrina
ENSPEMG00000008872	Snrnp48	100	89.691	ENSMLEG00000034004	SNRNP48	100	89.381	Mandrillus_leucophaeus
ENSPEMG00000008872	Snrnp48	77	48.846	ENSMAMG00000018673	snrnp48	83	44.315	Mastacembelus_armatus
ENSPEMG00000008872	Snrnp48	82	64.626	ENSMGAG00000006037	SNRNP48	99	65.411	Meleagris_gallopavo
ENSPEMG00000008872	Snrnp48	100	97.895	ENSMAUG00000011944	Snrnp48	100	97.329	Mesocricetus_auratus
ENSPEMG00000008872	Snrnp48	100	87.906	ENSMICG00000012497	SNRNP48	100	88.201	Microcebus_murinus
ENSPEMG00000008872	Snrnp48	100	96.736	ENSMOCG00000015555	Snrnp48	100	96.736	Microtus_ochrogaster
ENSPEMG00000008872	Snrnp48	54	54.054	ENSMMOG00000003072	-	58	54.054	Mola_mola
ENSPEMG00000008872	Snrnp48	99	70.231	ENSMODG00000009996	SNRNP48	93	70.520	Monodelphis_domestica
ENSPEMG00000008872	Snrnp48	96	45.706	ENSMALG00000005725	snrnp48	95	43.195	Monopterus_albus
ENSPEMG00000008872	Snrnp48	100	94.362	MGP_CAROLIEiJ_G0018441	Snrnp48	100	94.362	Mus_caroli
ENSPEMG00000008872	Snrnp48	100	94.065	ENSMUSG00000021431	Snrnp48	100	94.065	Mus_musculus
ENSPEMG00000008872	Snrnp48	100	94.955	MGP_PahariEiJ_G0019509	Snrnp48	100	94.955	Mus_pahari
ENSPEMG00000008872	Snrnp48	100	93.769	MGP_SPRETEiJ_G0019321	Snrnp48	100	93.769	Mus_spretus
ENSPEMG00000008872	Snrnp48	99	91.420	ENSNGAG00000004849	Snrnp48	99	91.420	Nannospalax_galili
ENSPEMG00000008872	Snrnp48	75	48.438	ENSNBRG00000012127	snrnp48	95	42.690	Neolamprologus_brichardi
ENSPEMG00000008872	Snrnp48	100	89.691	ENSNLEG00000011667	SNRNP48	100	89.381	Nomascus_leucogenys
ENSPEMG00000008872	Snrnp48	95	79.567	ENSOPRG00000015471	SNRNP48	100	78.947	Ochotona_princeps
ENSPEMG00000008872	Snrnp48	50	72.973	ENSODEG00000005816	-	95	72.973	Octodon_degus
ENSPEMG00000008872	Snrnp48	96	44.985	ENSONIG00000001520	snrnp48	95	43.064	Oreochromis_niloticus
ENSPEMG00000008872	Snrnp48	63	59.893	ENSOANG00000019888	-	100	62.500	Ornithorhynchus_anatinus
ENSPEMG00000008872	Snrnp48	85	89.161	ENSOCUG00000005168	SNRNP48	100	88.816	Oryctolagus_cuniculus
ENSPEMG00000008872	Snrnp48	97	44.477	ENSORLG00000015654	snrnp48	96	43.662	Oryzias_latipes
ENSPEMG00000008872	Snrnp48	89	47.403	ENSORLG00020015976	snrnp48	79	44.477	Oryzias_latipes_hni
ENSPEMG00000008872	Snrnp48	97	45.723	ENSORLG00015022379	snrnp48	82	44.225	Oryzias_latipes_hsok
ENSPEMG00000008872	Snrnp48	97	44.776	ENSOMEG00000022007	snrnp48	95	44.928	Oryzias_melastigma
ENSPEMG00000008872	Snrnp48	91	87.255	ENSOGAG00000005275	SNRNP48	96	87.066	Otolemur_garnettii
ENSPEMG00000008872	Snrnp48	85	85.366	ENSOARG00000017319	SNRNP48	100	85.366	Ovis_aries
ENSPEMG00000008872	Snrnp48	100	89.691	ENSPPAG00000032873	SNRNP48	100	89.381	Pan_paniscus
ENSPEMG00000008872	Snrnp48	100	88.496	ENSPPRG00000004283	SNRNP48	100	88.791	Panthera_pardus
ENSPEMG00000008872	Snrnp48	85	88.502	ENSPTIG00000013502	SNRNP48	100	88.850	Panthera_tigris_altaica
ENSPEMG00000008872	Snrnp48	100	89.691	ENSPTRG00000017703	SNRNP48	100	89.381	Pan_troglodytes
ENSPEMG00000008872	Snrnp48	100	89.691	ENSPANG00000000771	SNRNP48	100	89.381	Papio_anubis
ENSPEMG00000008872	Snrnp48	94	46.064	ENSPKIG00000013703	snrnp48	59	50.175	Paramormyrops_kingsleyae
ENSPEMG00000008872	Snrnp48	88	62.975	ENSPSIG00000002213	SNRNP48	97	63.057	Pelodiscus_sinensis
ENSPEMG00000008872	Snrnp48	75	49.035	ENSPMGG00000008120	snrnp48	90	49.035	Periophthalmus_magnuspinnatus
ENSPEMG00000008872	Snrnp48	75	51.172	ENSPFOG00000003578	snrnp48	93	45.266	Poecilia_formosa
ENSPEMG00000008872	Snrnp48	69	50.427	ENSPLAG00000002290	snrnp48	79	50.427	Poecilia_latipinna
ENSPEMG00000008872	Snrnp48	75	50.781	ENSPMEG00000018033	snrnp48	93	44.970	Poecilia_mexicana
ENSPEMG00000008872	Snrnp48	74	50.996	ENSPREG00000018541	snrnp48	93	45.858	Poecilia_reticulata
ENSPEMG00000008872	Snrnp48	100	88.660	ENSPPYG00000016209	SNRNP48	100	87.906	Pongo_abelii
ENSPEMG00000008872	Snrnp48	74	80.000	ENSPCAG00000011991	SNRNP48	99	70.412	Procavia_capensis
ENSPEMG00000008872	Snrnp48	100	86.598	ENSPVAG00000002854	SNRNP48	100	86.726	Pteropus_vampyrus
ENSPEMG00000008872	Snrnp48	75	48.828	ENSPNYG00000015399	snrnp48	90	46.713	Pundamilia_nyererei
ENSPEMG00000008872	Snrnp48	100	95.789	ENSRNOG00000013756	Snrnp48	100	94.659	Rattus_norvegicus
ENSPEMG00000008872	Snrnp48	92	88.710	ENSRBIG00000043856	SNRNP48	97	89.251	Rhinopithecus_bieti
ENSPEMG00000008872	Snrnp48	100	89.691	ENSRROG00000043229	SNRNP48	100	89.086	Rhinopithecus_roxellana
ENSPEMG00000008872	Snrnp48	100	89.381	ENSSBOG00000019486	SNRNP48	100	89.676	Saimiri_boliviensis_boliviensis
ENSPEMG00000008872	Snrnp48	99	68.451	ENSSHAG00000014483	SNRNP48	100	70.487	Sarcophilus_harrisii
ENSPEMG00000008872	Snrnp48	74	51.969	ENSSFOG00015006610	snrnp48	70	49.158	Scleropages_formosus
ENSPEMG00000008872	Snrnp48	85	46.690	ENSSDUG00000014953	snrnp48	92	43.675	Seriola_dumerili
ENSPEMG00000008872	Snrnp48	85	47.099	ENSSLDG00000005989	snrnp48	92	43.976	Seriola_lalandi_dorsalis
ENSPEMG00000008872	Snrnp48	84	63.087	ENSSPUG00000006257	SNRNP48	85	64.765	Sphenodon_punctatus
ENSPEMG00000008872	Snrnp48	96	43.844	ENSSPAG00000006454	snrnp48	93	44.675	Stegastes_partitus
ENSPEMG00000008872	Snrnp48	83	63.574	ENSTGUG00000007575	SNRNP48	93	63.574	Taeniopygia_guttata
ENSPEMG00000008872	Snrnp48	74	50.199	ENSTRUG00000007031	snrnp48	80	49.635	Takifugu_rubripes
ENSPEMG00000008872	Snrnp48	75	46.667	ENSTNIG00000012977	-	75	46.667	Tetraodon_nigroviridis
ENSPEMG00000008872	Snrnp48	100	85.876	ENSTBEG00000015620	SNRNP48	100	73.077	Tupaia_belangeri
ENSPEMG00000008872	Snrnp48	100	87.021	ENSTTRG00000016715	SNRNP48	100	87.021	Tursiops_truncatus
ENSPEMG00000008872	Snrnp48	100	88.496	ENSUAMG00000003690	SNRNP48	100	88.496	Ursus_americanus
ENSPEMG00000008872	Snrnp48	85	84.669	ENSVPAG00000003557	SNRNP48	100	84.669	Vicugna_pacos
ENSPEMG00000008872	Snrnp48	99	88.427	ENSVVUG00000004996	SNRNP48	99	88.724	Vulpes_vulpes
ENSPEMG00000008872	Snrnp48	86	53.020	ENSXETG00000020447	snrnp48	97	51.190	Xenopus_tropicalis
ENSPEMG00000008872	Snrnp48	69	50.213	ENSXCOG00000004478	snrnp48	71	50.213	Xiphophorus_couchianus
ENSPEMG00000008872	Snrnp48	84	48.944	ENSXMAG00000013595	snrnp48	93	45.858	Xiphophorus_maculatus