EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPEMG00000008942 (Gene tree)
Gene ID: 102919540
Gene Symbol: Gfm1
Alias: -
Full Name: G elongation factor mitochondrial 1
Gene Type: protein_coding
Species: Peromyscus_maniculatus_bairdii
Status: putative
Strand: Plus strand
Length: 48233 bases
Position: chrKI615341.1:5440592-5488824
Accession: 102919540
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPEMP00000006833	GTP_EFTU	PF00009.27	1.1e-62	1	1
ENSPEMP00000006833	GTP_EFTU_D2	PF03144.25	4.8e-17	1	1
ENSPEMP00000006833	EFG_IV	PF03764.18	5.4e-34	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPEMT00000010960	-	2584	XM_006972632	ENSPEMP00000006833	751 (aa)	XP_006972694	UPI00042AC0AF

Gene Model

Click here to download ENSPEMG00000008942's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPEMG00000008942's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPEMG00000008942	Gfm1	63	30.282	ENSPEMG00000005129	Eftud2	54	30.282
ENSPEMG00000008942	Gfm1	73	39.333	ENSPEMG00000021167	Eef2	74	39.333
ENSPEMG00000008942	Gfm1	92	34.705	ENSPEMG00000000622	Gfm2	90	34.979
ENSPEMG00000008942	Gfm1	56	33.014	ENSPEMG00000021702	Guf1	64	33.014

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPEMG00000008942	Gfm1	98	92.255	ENSG00000168827	GFM1	100	98.333	Homo_sapiens
ENSPEMG00000008942	Gfm1	93	76.748	ENSAPOG00000016489	gfm1	99	76.748	Acanthochromis_polyacanthus
ENSPEMG00000008942	Gfm1	98	92.828	ENSAMEG00000013542	GFM1	100	92.440	Ailuropoda_melanoleuca
ENSPEMG00000008942	Gfm1	95	76.323	ENSACIG00000014465	gfm1	93	76.323	Amphilophus_citrinellus
ENSPEMG00000008942	Gfm1	99	77.480	ENSAOCG00000006023	gfm1	99	77.480	Amphiprion_ocellaris
ENSPEMG00000008942	Gfm1	99	77.480	ENSAPEG00000024499	gfm1	99	79.469	Amphiprion_percula
ENSPEMG00000008942	Gfm1	100	78.429	ENSATEG00000013789	gfm1	100	78.429	Anabas_testudineus
ENSPEMG00000008942	Gfm1	96	84.000	ENSAPLG00000005022	GFM1	100	84.000	Anas_platyrhynchos
ENSPEMG00000008942	Gfm1	97	83.609	ENSACAG00000006829	GFM1	98	83.609	Anolis_carolinensis
ENSPEMG00000008942	Gfm1	100	91.247	ENSANAG00000035983	GFM1	100	91.247	Aotus_nancymaae
ENSPEMG00000008942	Gfm1	100	79.361	ENSACLG00000016586	gfm1	100	79.361	Astatotilapia_calliptera
ENSPEMG00000008942	Gfm1	100	79.228	ENSAMXG00000013435	gfm1	98	80.352	Astyanax_mexicanus
ENSPEMG00000008942	Gfm1	100	93.758	ENSBTAG00000027795	GFM1	100	93.758	Bos_taurus
ENSPEMG00000008942	Gfm1	97	55.435	WBGene00009246	gfm-1	99	55.288	Caenorhabditis_elegans
ENSPEMG00000008942	Gfm1	100	91.356	ENSCJAG00000000363	GFM1	100	91.356	Callithrix_jacchus
ENSPEMG00000008942	Gfm1	98	93.496	ENSCAFG00000009006	GFM1	100	94.675	Canis_familiaris
ENSPEMG00000008942	Gfm1	98	93.775	ENSCAFG00020005878	GFM1	99	94.475	Canis_lupus_dingo
ENSPEMG00000008942	Gfm1	100	93.758	ENSCHIG00000015220	GFM1	100	93.758	Capra_hircus
ENSPEMG00000008942	Gfm1	100	92.563	ENSTSYG00000002013	GFM1	100	92.563	Carlito_syrichta
ENSPEMG00000008942	Gfm1	98	80.728	ENSCAPG00000005699	GFM1	99	80.728	Cavia_aperea
ENSPEMG00000008942	Gfm1	100	92.175	ENSCPOG00000001194	GFM1	100	92.175	Cavia_porcellus
ENSPEMG00000008942	Gfm1	100	91.379	ENSCCAG00000025561	GFM1	100	91.379	Cebus_capucinus
ENSPEMG00000008942	Gfm1	100	91.379	ENSCATG00000037622	GFM1	100	91.379	Cercocebus_atys
ENSPEMG00000008942	Gfm1	98	91.892	ENSCLAG00000002503	GFM1	99	91.432	Chinchilla_lanigera
ENSPEMG00000008942	Gfm1	100	91.247	ENSCSAG00000012162	GFM1	100	91.247	Chlorocebus_sabaeus
ENSPEMG00000008942	Gfm1	100	83.687	ENSCHOG00000004867	GFM1	100	83.687	Choloepus_hoffmanni
ENSPEMG00000008942	Gfm1	100	82.557	ENSCPBG00000018367	GFM1	99	82.557	Chrysemys_picta_bellii
ENSPEMG00000008942	Gfm1	95	59.945	ENSCING00000011960	-	94	59.945	Ciona_intestinalis
ENSPEMG00000008942	Gfm1	95	60.055	ENSCSAVG00000008514	-	99	60.055	Ciona_savignyi
ENSPEMG00000008942	Gfm1	98	92.255	ENSCANG00000031714	GFM1	100	91.512	Colobus_angolensis_palliatus
ENSPEMG00000008942	Gfm1	100	97.071	ENSCGRG00001022095	GFM1	100	97.071	Cricetulus_griseus_chok1gshd
ENSPEMG00000008942	Gfm1	100	97.071	ENSCGRG00000012043	GFM1	100	97.071	Cricetulus_griseus_crigri
ENSPEMG00000008942	Gfm1	95	76.709	ENSCSEG00000017088	gfm1	98	76.709	Cynoglossus_semilaevis
ENSPEMG00000008942	Gfm1	99	80.697	ENSCVAG00000004126	gfm1	99	81.690	Cyprinodon_variegatus
ENSPEMG00000008942	Gfm1	100	78.029	ENSDARG00000063624	gfm1	100	78.029	Danio_rerio
ENSPEMG00000008942	Gfm1	54	90.709	ENSDNOG00000016385	-	100	90.709	Dasypus_novemcinctus
ENSPEMG00000008942	Gfm1	100	90.691	ENSDORG00000014165	Gfm1	100	90.691	Dipodomys_ordii
ENSPEMG00000008942	Gfm1	94	66.996	FBgn0263133	mEFG1	95	66.996	Drosophila_melanogaster
ENSPEMG00000008942	Gfm1	98	82.726	ENSETEG00000019197	GFM1	100	82.407	Echinops_telfairi
ENSPEMG00000008942	Gfm1	90	66.766	ENSEBUG00000012794	gfm1	99	66.766	Eptatretus_burgeri
ENSPEMG00000008942	Gfm1	96	68.690	ENSEEUG00000000429	GFM1	99	68.690	Erinaceus_europaeus
ENSPEMG00000008942	Gfm1	100	77.230	ENSELUG00000014728	gfm1	100	77.230	Esox_lucius
ENSPEMG00000008942	Gfm1	98	94.317	ENSFCAG00000013291	GFM1	100	94.032	Felis_catus
ENSPEMG00000008942	Gfm1	90	83.704	ENSFALG00000007619	GFM1	100	83.704	Ficedula_albicollis
ENSPEMG00000008942	Gfm1	100	91.114	ENSFDAG00000016559	GFM1	100	91.114	Fukomys_damarensis
ENSPEMG00000008942	Gfm1	100	79.095	ENSFHEG00000006091	gfm1	100	79.095	Fundulus_heteroclitus
ENSPEMG00000008942	Gfm1	95	78.779	ENSGMOG00000010161	gfm1	99	78.779	Gadus_morhua
ENSPEMG00000008942	Gfm1	98	81.547	ENSGALG00000009634	GFM1	99	81.547	Gallus_gallus
ENSPEMG00000008942	Gfm1	100	79.893	ENSGAFG00000012527	gfm1	100	79.893	Gambusia_affinis
ENSPEMG00000008942	Gfm1	99	77.793	ENSGACG00000009864	gfm1	99	77.793	Gasterosteus_aculeatus
ENSPEMG00000008942	Gfm1	98	92.527	ENSGGOG00000003085	GFM1	100	91.777	Gorilla_gorilla
ENSPEMG00000008942	Gfm1	100	79.494	ENSHBUG00000002120	gfm1	100	79.494	Haplochromis_burtoni
ENSPEMG00000008942	Gfm1	98	92.016	ENSHGLG00000016855	GFM1	100	91.114	Heterocephalus_glaber_female
ENSPEMG00000008942	Gfm1	98	92.016	ENSHGLG00100013049	GFM1	100	91.114	Heterocephalus_glaber_male
ENSPEMG00000008942	Gfm1	99	78.150	ENSHCOG00000007638	gfm1	97	80.692	Hippocampus_comes
ENSPEMG00000008942	Gfm1	97	80.690	ENSIPUG00000005873	gfm1	100	79.095	Ictalurus_punctatus
ENSPEMG00000008942	Gfm1	100	90.027	ENSSTOG00000010150	GFM1	100	90.027	Ictidomys_tridecemlineatus
ENSPEMG00000008942	Gfm1	100	93.609	ENSJJAG00000016447	Gfm1	100	93.609	Jaculus_jaculus
ENSPEMG00000008942	Gfm1	100	77.364	ENSKMAG00000020768	gfm1	100	77.364	Kryptolebias_marmoratus
ENSPEMG00000008942	Gfm1	93	80.742	ENSLBEG00000021315	gfm1	100	80.742	Labrus_bergylta
ENSPEMG00000008942	Gfm1	100	78.836	ENSLACG00000012295	GFM1	100	78.836	Latimeria_chalumnae
ENSPEMG00000008942	Gfm1	96	76.138	ENSLOCG00000003778	gfm1	99	76.138	Lepisosteus_oculatus
ENSPEMG00000008942	Gfm1	99	89.523	ENSLAFG00000010945	GFM1	100	89.655	Loxodonta_africana
ENSPEMG00000008942	Gfm1	100	91.645	ENSMFAG00000035731	GFM1	100	91.645	Macaca_fascicularis
ENSPEMG00000008942	Gfm1	100	91.777	ENSMMUG00000004961	GFM1	100	91.777	Macaca_mulatta
ENSPEMG00000008942	Gfm1	100	91.379	ENSMNEG00000033245	GFM1	100	91.379	Macaca_nemestrina
ENSPEMG00000008942	Gfm1	96	90.759	ENSMLEG00000030908	GFM1	99	90.431	Mandrillus_leucophaeus
ENSPEMG00000008942	Gfm1	100	78.828	ENSMAMG00000011760	gfm1	100	78.828	Mastacembelus_armatus
ENSPEMG00000008942	Gfm1	100	79.494	ENSMZEG00005016639	gfm1	100	79.494	Maylandia_zebra
ENSPEMG00000008942	Gfm1	96	83.032	ENSMGAG00000010641	GFM1	97	83.032	Meleagris_gallopavo
ENSPEMG00000008942	Gfm1	100	96.937	ENSMAUG00000000611	Gfm1	100	96.937	Mesocricetus_auratus
ENSPEMG00000008942	Gfm1	98	93.207	ENSMICG00000049086	GFM1	100	92.440	Microcebus_murinus
ENSPEMG00000008942	Gfm1	100	96.005	ENSMOCG00000000465	Gfm1	100	96.005	Microtus_ochrogaster
ENSPEMG00000008942	Gfm1	95	80.614	ENSMMOG00000012538	gfm1	97	80.614	Mola_mola
ENSPEMG00000008942	Gfm1	100	85.353	ENSMODG00000015673	GFM1	100	85.353	Monodelphis_domestica
ENSPEMG00000008942	Gfm1	95	80.614	ENSMALG00000012508	gfm1	95	80.614	Monopterus_albus
ENSPEMG00000008942	Gfm1	100	94.807	MGP_CAROLIEiJ_G0025052	Gfm1	100	94.807	Mus_caroli
ENSPEMG00000008942	Gfm1	100	95.073	ENSMUSG00000027774	Gfm1	100	95.073	Mus_musculus
ENSPEMG00000008942	Gfm1	100	95.206	MGP_PahariEiJ_G0026495	Gfm1	100	95.206	Mus_pahari
ENSPEMG00000008942	Gfm1	100	95.073	MGP_SPRETEiJ_G0025994	Gfm1	100	95.073	Mus_spretus
ENSPEMG00000008942	Gfm1	100	92.308	ENSMPUG00000002859	GFM1	100	92.308	Mustela_putorius_furo
ENSPEMG00000008942	Gfm1	100	93.369	ENSMLUG00000000452	GFM1	100	93.369	Myotis_lucifugus
ENSPEMG00000008942	Gfm1	100	94.407	ENSNGAG00000012375	Gfm1	100	94.407	Nannospalax_galili
ENSPEMG00000008942	Gfm1	95	82.008	ENSNBRG00000004631	gfm1	98	82.008	Neolamprologus_brichardi
ENSPEMG00000008942	Gfm1	98	92.527	ENSNLEG00000004176	GFM1	100	91.777	Nomascus_leucogenys
ENSPEMG00000008942	Gfm1	91	78.624	ENSMEUG00000007784	GFM1	99	78.624	Notamacropus_eugenii
ENSPEMG00000008942	Gfm1	100	89.761	ENSOPRG00000009860	GFM1	100	89.761	Ochotona_princeps
ENSPEMG00000008942	Gfm1	98	92.693	ENSODEG00000004316	GFM1	100	91.777	Octodon_degus
ENSPEMG00000008942	Gfm1	100	79.494	ENSONIG00000003772	gfm1	100	79.494	Oreochromis_niloticus
ENSPEMG00000008942	Gfm1	98	93.911	ENSOCUG00000013561	GFM1	100	93.369	Oryctolagus_cuniculus
ENSPEMG00000008942	Gfm1	94	82.062	ENSORLG00000006487	gfm1	100	82.062	Oryzias_latipes
ENSPEMG00000008942	Gfm1	97	81.103	ENSORLG00020003362	gfm1	97	81.103	Oryzias_latipes_hni
ENSPEMG00000008942	Gfm1	97	80.690	ENSORLG00015005829	gfm1	97	80.690	Oryzias_latipes_hsok
ENSPEMG00000008942	Gfm1	95	82.287	ENSOMEG00000012894	gfm1	96	82.287	Oryzias_melastigma
ENSPEMG00000008942	Gfm1	100	92.175	ENSOGAG00000008298	GFM1	100	92.175	Otolemur_garnettii
ENSPEMG00000008942	Gfm1	96	93.398	ENSOARG00000002409	GFM1	100	93.398	Ovis_aries
ENSPEMG00000008942	Gfm1	98	92.527	ENSPPAG00000033881	GFM1	100	91.777	Pan_paniscus
ENSPEMG00000008942	Gfm1	98	94.181	ENSPPRG00000009281	GFM1	100	93.899	Panthera_pardus
ENSPEMG00000008942	Gfm1	98	94.046	ENSPTIG00000012416	GFM1	100	93.767	Panthera_tigris_altaica
ENSPEMG00000008942	Gfm1	98	92.527	ENSPTRG00000015570	GFM1	100	91.777	Pan_troglodytes
ENSPEMG00000008942	Gfm1	100	91.777	ENSPANG00000016512	GFM1	100	91.777	Papio_anubis
ENSPEMG00000008942	Gfm1	100	79.095	ENSPKIG00000004876	gfm1	100	79.095	Paramormyrops_kingsleyae
ENSPEMG00000008942	Gfm1	100	81.891	ENSPSIG00000012567	GFM1	99	81.891	Pelodiscus_sinensis
ENSPEMG00000008942	Gfm1	95	79.416	ENSPMGG00000014068	gfm1	99	79.416	Periophthalmus_magnuspinnatus
ENSPEMG00000008942	Gfm1	85	85.179	ENSPCIG00000020195	GFM1	98	85.179	Phascolarctos_cinereus
ENSPEMG00000008942	Gfm1	100	80.293	ENSPFOG00000011022	gfm1	100	80.293	Poecilia_formosa
ENSPEMG00000008942	Gfm1	95	82.706	ENSPLAG00000019585	gfm1	100	79.301	Poecilia_latipinna
ENSPEMG00000008942	Gfm1	100	80.160	ENSPMEG00000012376	gfm1	100	80.160	Poecilia_mexicana
ENSPEMG00000008942	Gfm1	100	79.760	ENSPREG00000001332	gfm1	95	79.760	Poecilia_reticulata
ENSPEMG00000008942	Gfm1	98	92.663	ENSPPYG00000014244	GFM1	100	91.910	Pongo_abelii
ENSPEMG00000008942	Gfm1	93	88.905	ENSPCAG00000008934	GFM1	100	88.905	Procavia_capensis
ENSPEMG00000008942	Gfm1	98	93.614	ENSPCOG00000022259	GFM1	100	92.971	Propithecus_coquereli
ENSPEMG00000008942	Gfm1	100	92.573	ENSPVAG00000013605	GFM1	100	92.573	Pteropus_vampyrus
ENSPEMG00000008942	Gfm1	100	79.228	ENSPNYG00000006037	gfm1	100	80.081	Pundamilia_nyererei
ENSPEMG00000008942	Gfm1	100	79.095	ENSPNAG00000001237	gfm1	100	79.095	Pygocentrus_nattereri
ENSPEMG00000008942	Gfm1	100	94.674	ENSRNOG00000012873	Gfm1	100	94.674	Rattus_norvegicus
ENSPEMG00000008942	Gfm1	98	92.120	ENSRBIG00000031363	GFM1	100	91.379	Rhinopithecus_bieti
ENSPEMG00000008942	Gfm1	98	92.255	ENSRROG00000031081	GFM1	100	91.512	Rhinopithecus_roxellana
ENSPEMG00000008942	Gfm1	92	57.122	YLR069C	-	90	57.122	Saccharomyces_cerevisiae
ENSPEMG00000008942	Gfm1	100	91.910	ENSSBOG00000023252	GFM1	100	91.910	Saimiri_boliviensis_boliviensis
ENSPEMG00000008942	Gfm1	99	86.059	ENSSHAG00000017772	GFM1	99	86.059	Sarcophilus_harrisii
ENSPEMG00000008942	Gfm1	100	79.095	ENSSFOG00015003117	gfm1	99	80.966	Scleropages_formosus
ENSPEMG00000008942	Gfm1	100	77.630	ENSSMAG00000013221	gfm1	99	77.630	Scophthalmus_maximus
ENSPEMG00000008942	Gfm1	99	78.677	ENSSDUG00000018665	gfm1	100	77.630	Seriola_dumerili
ENSPEMG00000008942	Gfm1	100	77.630	ENSSLDG00000020606	gfm1	100	77.630	Seriola_lalandi_dorsalis
ENSPEMG00000008942	Gfm1	95	82.008	ENSSPUG00000018686	GFM1	97	82.008	Sphenodon_punctatus
ENSPEMG00000008942	Gfm1	100	77.896	ENSSPAG00000008800	gfm1	100	77.896	Stegastes_partitus
ENSPEMG00000008942	Gfm1	100	93.236	ENSSSCG00000025651	GFM1	100	93.236	Sus_scrofa
ENSPEMG00000008942	Gfm1	100	77.763	ENSTRUG00000009244	gfm1	100	77.763	Takifugu_rubripes
ENSPEMG00000008942	Gfm1	100	78.695	ENSTNIG00000007729	gfm1	100	78.695	Tetraodon_nigroviridis
ENSPEMG00000008942	Gfm1	98	77.058	ENSTBEG00000017404	GFM1	100	76.984	Tupaia_belangeri
ENSPEMG00000008942	Gfm1	98	93.496	ENSTTRG00000001735	GFM1	100	92.074	Tursiops_truncatus
ENSPEMG00000008942	Gfm1	98	93.369	ENSUAMG00000026381	GFM1	100	92.971	Ursus_americanus
ENSPEMG00000008942	Gfm1	98	93.234	ENSUMAG00000011268	GFM1	100	92.838	Ursus_maritimus
ENSPEMG00000008942	Gfm1	100	89.243	ENSVPAG00000009444	GFM1	100	89.243	Vicugna_pacos
ENSPEMG00000008942	Gfm1	99	92.390	ENSVVUG00000020091	GFM1	100	94.527	Vulpes_vulpes
ENSPEMG00000008942	Gfm1	100	82.447	ENSXETG00000032551	GFM1	100	82.447	Xenopus_tropicalis
ENSPEMG00000008942	Gfm1	51	80.052	ENSXCOG00000012590	gfm1	89	80.052	Xiphophorus_couchianus
ENSPEMG00000008942	Gfm1	100	79.494	ENSXMAG00000000261	gfm1	100	79.494	Xiphophorus_maculatus