EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPEMG00000009153 (Gene tree)
Gene ID: -
Gene Symbol: Lsm8
Alias: -
Full Name: LSM8 homolog%2C U6 small nuclear RNA associated
Gene Type: protein_coding
Species: Peromyscus_maniculatus_bairdii
Status: putative
Strand: Plus strand
Length: 2924 bases
Position: chrKI615832.1:1158399-1161322
Accession: 1923772
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPEMP00000007115	LSM	PF01423.22	1.4e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPEMT00000011249	-	225	-	ENSPEMP00000007115	74 (aa)	-	-

Gene Model

Click here to download ENSPEMG00000009153's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPEMG00000009153's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPEMG00000009153	Lsm8	91	37.313	ENSPEMG00000006278	Lsm1	50	37.313

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPEMG00000009153	Lsm8	100	97.297	ENSG00000128534	LSM8	99	97.297	Homo_sapiens
ENSPEMG00000009153	Lsm8	100	94.595	ENSAPOG00000008649	lsm8	77	94.595	Acanthochromis_polyacanthus
ENSPEMG00000009153	Lsm8	100	97.297	ENSAMEG00000001162	LSM8	77	97.297	Ailuropoda_melanoleuca
ENSPEMG00000009153	Lsm8	100	94.595	ENSACIG00000014694	lsm8	99	94.595	Amphilophus_citrinellus
ENSPEMG00000009153	Lsm8	100	94.595	ENSAOCG00000013926	lsm8	77	94.595	Amphiprion_ocellaris
ENSPEMG00000009153	Lsm8	100	94.595	ENSAPEG00000023502	lsm8	77	94.595	Amphiprion_percula
ENSPEMG00000009153	Lsm8	100	94.595	ENSATEG00000023432	lsm8	99	94.595	Anabas_testudineus
ENSPEMG00000009153	Lsm8	100	95.946	ENSAPLG00000005115	LSM8	75	95.946	Anas_platyrhynchos
ENSPEMG00000009153	Lsm8	100	98.649	ENSANAG00000027771	LSM8	100	98.649	Aotus_nancymaae
ENSPEMG00000009153	Lsm8	100	94.595	ENSACLG00000011253	lsm8	77	94.595	Astatotilapia_calliptera
ENSPEMG00000009153	Lsm8	100	95.946	ENSAMXG00000042902	lsm8	77	95.946	Astyanax_mexicanus
ENSPEMG00000009153	Lsm8	100	97.297	ENSBTAG00000012649	LSM8	77	97.297	Bos_taurus
ENSPEMG00000009153	Lsm8	97	55.556	WBGene00003082	lsm-8	73	55.556	Caenorhabditis_elegans
ENSPEMG00000009153	Lsm8	100	98.649	ENSCJAG00000046406	LSM8	100	98.649	Callithrix_jacchus
ENSPEMG00000009153	Lsm8	99	97.260	ENSCAFG00000016459	LSM8	74	97.260	Canis_familiaris
ENSPEMG00000009153	Lsm8	100	82.432	ENSCAFG00020012800	-	58	82.432	Canis_lupus_dingo
ENSPEMG00000009153	Lsm8	100	97.297	ENSCAFG00020007643	-	77	97.297	Canis_lupus_dingo
ENSPEMG00000009153	Lsm8	100	97.297	ENSCHIG00000014201	LSM8	79	97.297	Capra_hircus
ENSPEMG00000009153	Lsm8	100	97.297	ENSTSYG00000032434	LSM8	77	97.297	Carlito_syrichta
ENSPEMG00000009153	Lsm8	100	97.297	ENSCAPG00000008253	LSM8	100	97.297	Cavia_aperea
ENSPEMG00000009153	Lsm8	100	97.297	ENSCPOG00000035673	LSM8	77	97.297	Cavia_porcellus
ENSPEMG00000009153	Lsm8	100	98.649	ENSCCAG00000021329	LSM8	100	98.649	Cebus_capucinus
ENSPEMG00000009153	Lsm8	100	98.649	ENSCATG00000045302	LSM8	100	98.649	Cercocebus_atys
ENSPEMG00000009153	Lsm8	100	97.297	ENSCLAG00000003726	LSM8	77	97.297	Chinchilla_lanigera
ENSPEMG00000009153	Lsm8	100	94.595	ENSCSAG00000019007	-	77	94.595	Chlorocebus_sabaeus
ENSPEMG00000009153	Lsm8	100	97.297	ENSCSAG00000010802	-	77	97.297	Chlorocebus_sabaeus
ENSPEMG00000009153	Lsm8	100	97.297	ENSCPBG00000008154	LSM8	76	97.297	Chrysemys_picta_bellii
ENSPEMG00000009153	Lsm8	100	77.027	ENSCING00000024877	-	77	77.027	Ciona_intestinalis
ENSPEMG00000009153	Lsm8	100	98.649	ENSCANG00000040728	LSM8	100	98.649	Colobus_angolensis_palliatus
ENSPEMG00000009153	Lsm8	100	97.297	ENSCGRG00001000450	Lsm8	77	97.297	Cricetulus_griseus_chok1gshd
ENSPEMG00000009153	Lsm8	100	97.297	ENSCGRG00000005587	Lsm8	87	97.297	Cricetulus_griseus_crigri
ENSPEMG00000009153	Lsm8	97	95.833	ENSCSEG00000004164	lsm8	79	95.833	Cynoglossus_semilaevis
ENSPEMG00000009153	Lsm8	100	93.243	ENSCVAG00000020547	lsm8	77	93.243	Cyprinodon_variegatus
ENSPEMG00000009153	Lsm8	100	94.595	ENSDARG00000091656	lsm8	77	94.595	Danio_rerio
ENSPEMG00000009153	Lsm8	100	97.297	ENSDNOG00000034613	LSM8	77	97.297	Dasypus_novemcinctus
ENSPEMG00000009153	Lsm8	100	97.297	ENSDORG00000027868	Lsm8	77	97.297	Dipodomys_ordii
ENSPEMG00000009153	Lsm8	100	71.622	FBgn0035271	CG2021	78	71.622	Drosophila_melanogaster
ENSPEMG00000009153	Lsm8	100	95.946	ENSETEG00000011594	LSM8	77	95.946	Echinops_telfairi
ENSPEMG00000009153	Lsm8	100	93.243	ENSEBUG00000012017	lsm8	100	93.243	Eptatretus_burgeri
ENSPEMG00000009153	Lsm8	100	97.297	ENSECAG00000024025	LSM8	71	100.000	Equus_caballus
ENSPEMG00000009153	Lsm8	100	91.892	ENSELUG00000010138	lsm8	77	91.892	Esox_lucius
ENSPEMG00000009153	Lsm8	89	69.697	ENSFCAG00000044794	-	65	69.697	Felis_catus
ENSPEMG00000009153	Lsm8	100	97.297	ENSFCAG00000036620	-	77	97.297	Felis_catus
ENSPEMG00000009153	Lsm8	100	95.946	ENSFALG00000010023	LSM8	77	95.946	Ficedula_albicollis
ENSPEMG00000009153	Lsm8	100	97.297	ENSFDAG00000019530	LSM8	77	97.297	Fukomys_damarensis
ENSPEMG00000009153	Lsm8	100	94.595	ENSFHEG00000013729	lsm8	77	94.595	Fundulus_heteroclitus
ENSPEMG00000009153	Lsm8	100	95.946	ENSGALG00000009110	LSM8	77	95.946	Gallus_gallus
ENSPEMG00000009153	Lsm8	100	93.243	ENSGAFG00000001135	lsm8	77	93.243	Gambusia_affinis
ENSPEMG00000009153	Lsm8	100	97.297	ENSGAGG00000017366	LSM8	77	97.297	Gopherus_agassizii
ENSPEMG00000009153	Lsm8	100	97.297	ENSGGOG00000041883	LSM8	77	97.297	Gorilla_gorilla
ENSPEMG00000009153	Lsm8	100	94.595	ENSHBUG00000003646	lsm8	77	94.595	Haplochromis_burtoni
ENSPEMG00000009153	Lsm8	97	94.444	ENSHGLG00000019782	-	75	94.444	Heterocephalus_glaber_female
ENSPEMG00000009153	Lsm8	62	95.652	ENSHGLG00000001988	-	67	95.652	Heterocephalus_glaber_female
ENSPEMG00000009153	Lsm8	100	91.892	ENSHGLG00100012166	-	77	91.892	Heterocephalus_glaber_male
ENSPEMG00000009153	Lsm8	99	93.151	ENSHGLG00100003934	-	73	93.151	Heterocephalus_glaber_male
ENSPEMG00000009153	Lsm8	100	93.243	ENSHCOG00000005037	lsm8	77	93.243	Hippocampus_comes
ENSPEMG00000009153	Lsm8	100	95.946	ENSIPUG00000019811	NAA38	77	95.946	Ictalurus_punctatus
ENSPEMG00000009153	Lsm8	100	98.649	ENSSTOG00000009039	LSM8	80	98.649	Ictidomys_tridecemlineatus
ENSPEMG00000009153	Lsm8	100	83.784	ENSSTOG00000034801	-	69	83.784	Ictidomys_tridecemlineatus
ENSPEMG00000009153	Lsm8	100	97.297	ENSJJAG00000009031	Lsm8	76	97.297	Jaculus_jaculus
ENSPEMG00000009153	Lsm8	100	94.595	ENSKMAG00000018983	lsm8	77	94.595	Kryptolebias_marmoratus
ENSPEMG00000009153	Lsm8	100	93.243	ENSLACG00000010231	LSM8	77	93.243	Latimeria_chalumnae
ENSPEMG00000009153	Lsm8	100	94.595	ENSLOCG00000015580	lsm8	77	94.595	Lepisosteus_oculatus
ENSPEMG00000009153	Lsm8	100	97.297	ENSLAFG00000011242	LSM8	76	97.297	Loxodonta_africana
ENSPEMG00000009153	Lsm8	100	93.243	ENSMFAG00000013044	-	77	93.243	Macaca_fascicularis
ENSPEMG00000009153	Lsm8	100	98.649	ENSMFAG00000035798	LSM8	100	98.649	Macaca_fascicularis
ENSPEMG00000009153	Lsm8	100	98.649	ENSMMUG00000046401	LSM8	100	98.649	Macaca_mulatta
ENSPEMG00000009153	Lsm8	100	93.243	ENSMNEG00000011141	-	99	93.243	Macaca_nemestrina
ENSPEMG00000009153	Lsm8	100	98.649	ENSMNEG00000036764	-	100	98.649	Macaca_nemestrina
ENSPEMG00000009153	Lsm8	100	81.081	ENSMLEG00000039324	-	75	81.081	Mandrillus_leucophaeus
ENSPEMG00000009153	Lsm8	100	98.649	ENSMLEG00000035828	-	100	98.649	Mandrillus_leucophaeus
ENSPEMG00000009153	Lsm8	100	94.595	ENSMAMG00000018839	lsm8	99	94.595	Mastacembelus_armatus
ENSPEMG00000009153	Lsm8	100	94.595	ENSMZEG00005019138	lsm8	77	94.595	Maylandia_zebra
ENSPEMG00000009153	Lsm8	100	95.946	ENSMGAG00000008808	LSM8	77	95.946	Meleagris_gallopavo
ENSPEMG00000009153	Lsm8	100	75.676	ENSMAUG00000015356	-	74	75.676	Mesocricetus_auratus
ENSPEMG00000009153	Lsm8	100	87.838	ENSMAUG00000015721	-	77	87.838	Mesocricetus_auratus
ENSPEMG00000009153	Lsm8	100	90.541	ENSMAUG00000020287	-	100	90.541	Mesocricetus_auratus
ENSPEMG00000009153	Lsm8	100	97.297	ENSMICG00000042730	LSM8	77	97.297	Microcebus_murinus
ENSPEMG00000009153	Lsm8	100	97.297	ENSMOCG00000001688	Lsm8	77	97.297	Microtus_ochrogaster
ENSPEMG00000009153	Lsm8	100	94.595	ENSMMOG00000006046	lsm8	99	94.595	Mola_mola
ENSPEMG00000009153	Lsm8	84	96.774	ENSMODG00000015729	LSM8	79	96.774	Monodelphis_domestica
ENSPEMG00000009153	Lsm8	100	94.595	ENSMALG00000000405	lsm8	77	94.595	Monopterus_albus
ENSPEMG00000009153	Lsm8	100	98.649	MGP_CAROLIEiJ_G0028125	-	77	97.297	Mus_caroli
ENSPEMG00000009153	Lsm8	100	98.649	ENSMUSG00000044155	Lsm8	77	97.297	Mus_musculus
ENSPEMG00000009153	Lsm8	100	97.297	MGP_PahariEiJ_G0021881	Lsm8	99	97.297	Mus_pahari
ENSPEMG00000009153	Lsm8	100	98.649	MGP_SPRETEiJ_G0029125	-	77	97.297	Mus_spretus
ENSPEMG00000009153	Lsm8	100	95.946	ENSMLUG00000027762	-	77	95.946	Myotis_lucifugus
ENSPEMG00000009153	Lsm8	100	97.297	ENSMLUG00000006837	-	77	97.297	Myotis_lucifugus
ENSPEMG00000009153	Lsm8	100	97.297	ENSNGAG00000016554	Lsm8	77	97.297	Nannospalax_galili
ENSPEMG00000009153	Lsm8	100	94.595	ENSNBRG00000014441	lsm8	77	94.595	Neolamprologus_brichardi
ENSPEMG00000009153	Lsm8	100	97.297	ENSNLEG00000011768	LSM8	77	97.297	Nomascus_leucogenys
ENSPEMG00000009153	Lsm8	100	83.784	ENSMEUG00000007801	LSM8	77	83.784	Notamacropus_eugenii
ENSPEMG00000009153	Lsm8	100	97.297	ENSOPRG00000014809	LSM8	87	97.297	Ochotona_princeps
ENSPEMG00000009153	Lsm8	86	79.688	ENSODEG00000020290	-	74	79.688	Octodon_degus
ENSPEMG00000009153	Lsm8	100	97.297	ENSODEG00000000418	-	77	97.297	Octodon_degus
ENSPEMG00000009153	Lsm8	100	97.297	ENSOANG00000014536	LSM8	77	97.297	Ornithorhynchus_anatinus
ENSPEMG00000009153	Lsm8	100	97.297	ENSOCUG00000017359	LSM8	76	97.297	Oryctolagus_cuniculus
ENSPEMG00000009153	Lsm8	100	95.946	ENSORLG00000017432	lsm8	79	95.946	Oryzias_latipes
ENSPEMG00000009153	Lsm8	100	95.946	ENSORLG00020004376	lsm8	79	95.946	Oryzias_latipes_hni
ENSPEMG00000009153	Lsm8	100	94.595	ENSORLG00015003757	lsm8	75	97.222	Oryzias_latipes_hsok
ENSPEMG00000009153	Lsm8	93	97.101	ENSOMEG00000022509	lsm8	82	95.946	Oryzias_melastigma
ENSPEMG00000009153	Lsm8	100	97.297	ENSOGAG00000013377	LSM8	77	97.297	Otolemur_garnettii
ENSPEMG00000009153	Lsm8	100	97.297	ENSOARG00000017974	LSM8	77	97.297	Ovis_aries
ENSPEMG00000009153	Lsm8	100	97.297	ENSPPAG00000043228	-	99	97.297	Pan_paniscus
ENSPEMG00000009153	Lsm8	100	97.297	ENSPPRG00000006444	LSM8	77	97.297	Panthera_pardus
ENSPEMG00000009153	Lsm8	100	97.297	ENSPTIG00000004722	LSM8	77	97.297	Panthera_tigris_altaica
ENSPEMG00000009153	Lsm8	100	97.297	ENSPTRG00000046596	-	99	97.297	Pan_troglodytes
ENSPEMG00000009153	Lsm8	100	91.892	ENSPANG00000019395	-	77	91.892	Papio_anubis
ENSPEMG00000009153	Lsm8	100	98.649	ENSPANG00000035470	-	100	98.649	Papio_anubis
ENSPEMG00000009153	Lsm8	100	94.595	ENSPKIG00000006092	lsm8	75	94.595	Paramormyrops_kingsleyae
ENSPEMG00000009153	Lsm8	100	97.297	ENSPSIG00000017054	LSM8	99	97.297	Pelodiscus_sinensis
ENSPEMG00000009153	Lsm8	100	94.595	ENSPMGG00000016442	lsm8	99	94.595	Periophthalmus_magnuspinnatus
ENSPEMG00000009153	Lsm8	96	97.183	ENSPCIG00000021467	LSM8	75	97.183	Phascolarctos_cinereus
ENSPEMG00000009153	Lsm8	100	93.243	ENSPFOG00000012340	lsm8	77	93.243	Poecilia_formosa
ENSPEMG00000009153	Lsm8	100	93.243	ENSPLAG00000000516	lsm8	77	93.243	Poecilia_latipinna
ENSPEMG00000009153	Lsm8	100	93.243	ENSPMEG00000022567	lsm8	77	93.243	Poecilia_mexicana
ENSPEMG00000009153	Lsm8	99	85.000	ENSPREG00000005527	lsm8	72	85.000	Poecilia_reticulata
ENSPEMG00000009153	Lsm8	100	97.297	ENSPPYG00000017942	LSM8	77	97.297	Pongo_abelii
ENSPEMG00000009153	Lsm8	99	72.603	ENSPCOG00000017982	-	73	72.603	Propithecus_coquereli
ENSPEMG00000009153	Lsm8	100	97.297	ENSPCOG00000003309	-	77	97.297	Propithecus_coquereli
ENSPEMG00000009153	Lsm8	100	95.946	ENSPVAG00000000990	LSM8	87	95.946	Pteropus_vampyrus
ENSPEMG00000009153	Lsm8	100	94.595	ENSPNYG00000011448	lsm8	77	94.595	Pundamilia_nyererei
ENSPEMG00000009153	Lsm8	100	95.946	ENSPNAG00000010252	lsm8	77	95.946	Pygocentrus_nattereri
ENSPEMG00000009153	Lsm8	100	97.297	ENSRNOG00000058677	Lsm8	77	97.297	Rattus_norvegicus
ENSPEMG00000009153	Lsm8	100	98.649	ENSRBIG00000032851	LSM8	100	98.649	Rhinopithecus_bieti
ENSPEMG00000009153	Lsm8	100	98.649	ENSRROG00000039618	LSM8	100	98.649	Rhinopithecus_roxellana
ENSPEMG00000009153	Lsm8	100	98.649	ENSSBOG00000023223	LSM8	100	98.649	Saimiri_boliviensis_boliviensis
ENSPEMG00000009153	Lsm8	100	97.297	ENSSHAG00000018435	-	77	97.297	Sarcophilus_harrisii
ENSPEMG00000009153	Lsm8	100	93.243	ENSSFOG00015004412	lsm8	77	93.243	Scleropages_formosus
ENSPEMG00000009153	Lsm8	100	94.595	ENSSMAG00000009458	lsm8	99	94.595	Scophthalmus_maximus
ENSPEMG00000009153	Lsm8	100	94.595	ENSSDUG00000014702	lsm8	77	94.595	Seriola_dumerili
ENSPEMG00000009153	Lsm8	100	94.595	ENSSLDG00000016870	lsm8	99	94.595	Seriola_lalandi_dorsalis
ENSPEMG00000009153	Lsm8	97	100.000	ENSSARG00000009628	-	100	100.000	Sorex_araneus
ENSPEMG00000009153	Lsm8	100	97.297	ENSSPUG00000017419	LSM8	77	97.297	Sphenodon_punctatus
ENSPEMG00000009153	Lsm8	100	94.595	ENSSPAG00000021422	lsm8	77	94.595	Stegastes_partitus
ENSPEMG00000009153	Lsm8	100	97.297	ENSSSCG00000021652	LSM8	77	97.297	Sus_scrofa
ENSPEMG00000009153	Lsm8	100	94.595	ENSTGUG00000016823	-	77	94.595	Taeniopygia_guttata
ENSPEMG00000009153	Lsm8	100	95.946	ENSTGUG00000004730	-	77	95.946	Taeniopygia_guttata
ENSPEMG00000009153	Lsm8	100	94.595	ENSTRUG00000025192	lsm8	77	94.595	Takifugu_rubripes
ENSPEMG00000009153	Lsm8	100	94.595	ENSTNIG00000002864	lsm8	77	94.595	Tetraodon_nigroviridis
ENSPEMG00000009153	Lsm8	100	97.297	ENSTTRG00000001023	LSM8	77	97.297	Tursiops_truncatus
ENSPEMG00000009153	Lsm8	100	97.297	ENSUAMG00000006943	-	77	97.297	Ursus_americanus
ENSPEMG00000009153	Lsm8	100	97.297	ENSUMAG00000003073	LSM8	79	97.297	Ursus_maritimus
ENSPEMG00000009153	Lsm8	100	97.297	ENSVPAG00000001530	LSM8	77	97.297	Vicugna_pacos
ENSPEMG00000009153	Lsm8	100	94.595	ENSVVUG00000013248	-	81	94.595	Vulpes_vulpes
ENSPEMG00000009153	Lsm8	100	94.595	ENSXETG00000021829	lsm8	76	94.595	Xenopus_tropicalis
ENSPEMG00000009153	Lsm8	100	91.892	ENSXCOG00000012938	lsm8	78	91.892	Xiphophorus_couchianus
ENSPEMG00000009153	Lsm8	100	93.243	ENSXMAG00000025919	lsm8	77	93.243	Xiphophorus_maculatus