EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPEMG00000009340 (Gene tree)
Gene ID: 102925231
Gene Symbol: Rab1a
Alias: -
Full Name: RAB1A%2C member RAS oncogene family
Gene Type: protein_coding
Species: Peromyscus_maniculatus_bairdii
Status: putative
Strand: Minus strand
Length: 31854 bases
Position: chrKI615367.1:6905805-6937658
Accession: 102925231
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPEMP00000007389	MMR_HSR1	PF01926.23	1.5e-05	1	1
ENSPEMP00000007380	MMR_HSR1	PF01926.23	1.5e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPEMT00000011529	-	615	-	ENSPEMP00000007389	204 (aa)	-	-
ENSPEMT00000011520	-	2896	XM_006974818	ENSPEMP00000007380	205 (aa)	XP_006974880	UPI0000001259
ENSPEMT00000011525	-	417	-	ENSPEMP00000007385	138 (aa)	-	UPI00004704BB
ENSPEMT00000011527	-	381	-	ENSPEMP00000007387	126 (aa)	-	UPI0000208584

Gene Model

Click here to download ENSPEMG00000009340's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPEMG00000009340's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPEMG00000009340	Rab1a	82	31.138	ENSPEMG00000010658	-	77	31.138
ENSPEMG00000009340	Rab1a	80	50.909	ENSPEMG00000017973	Rab15	78	50.909
ENSPEMG00000009340	Rab1a	95	43.077	ENSPEMG00000017971	Rab5c	89	43.077
ENSPEMG00000009340	Rab1a	76	39.623	ENSPEMG00000011803	Rab9b	79	39.623
ENSPEMG00000009340	Rab1a	95	43.299	ENSPEMG00000019311	Rab5a	90	43.299
ENSPEMG00000009340	Rab1a	81	35.329	ENSPEMG00000017605	Mras	83	35.632
ENSPEMG00000009340	Rab1a	90	39.247	ENSPEMG00000009456	Rab31	95	39.247
ENSPEMG00000009340	Rab1a	57	33.058	ENSPEMG00000007265	Arl2	61	33.058
ENSPEMG00000009340	Rab1a	58	34.454	ENSPEMG00000009150	Arl8a	62	34.454
ENSPEMG00000009340	Rab1a	81	50.602	ENSPEMG00000023854	Rab30	82	50.602
ENSPEMG00000009340	Rab1a	95	30.808	ENSPEMG00000023271	Rab23	83	30.808
ENSPEMG00000009340	Rab1a	82	31.214	ENSPEMG00000018814	Eras	72	32.370
ENSPEMG00000009340	Rab1a	99	92.079	ENSPEMG00000014878	-	100	92.079
ENSPEMG00000009340	Rab1a	97	45.327	ENSPEMG00000023981	Rab2b	99	45.327
ENSPEMG00000009340	Rab1a	97	46.829	ENSPEMG00000021125	-	95	46.829
ENSPEMG00000009340	Rab1a	57	31.092	ENSPEMG00000006610	Arl4c	61	31.092
ENSPEMG00000009340	Rab1a	80	37.805	ENSPEMG00000000572	Kras	95	35.912
ENSPEMG00000009340	Rab1a	62	30.769	ENSPEMG00000020737	Arl14	65	30.769
ENSPEMG00000009340	Rab1a	75	37.580	ENSPEMG00000024045	Rabl2	67	37.580
ENSPEMG00000009340	Rab1a	80	38.415	ENSPEMG00000021912	Nras	86	38.415
ENSPEMG00000009340	Rab1a	83	49.708	ENSPEMG00000021032	Rab12	59	49.708
ENSPEMG00000009340	Rab1a	95	43.367	ENSPEMG00000017625	Rab5b	90	43.367
ENSPEMG00000009340	Rab1a	95	36.410	ENSPEMG00000008933	Rab6b	94	36.410
ENSPEMG00000009340	Rab1a	84	35.028	ENSPEMG00000013973	-	93	35.028
ENSPEMG00000009340	Rab1a	95	45.361	ENSPEMG00000019445	Rab18	93	45.361
ENSPEMG00000009340	Rab1a	77	40.373	ENSPEMG00000015055	Rab34	62	40.373
ENSPEMG00000009340	Rab1a	99	44.554	ENSPEMG00000000242	Rab14	93	44.554
ENSPEMG00000009340	Rab1a	100	45.581	ENSPEMG00000014536	Rab11b	99	45.581
ENSPEMG00000009340	Rab1a	86	43.820	ENSPEMG00000017587	Rab39b	84	43.820
ENSPEMG00000009340	Rab1a	80	52.439	ENSPEMG00000005147	-	78	52.439
ENSPEMG00000009340	Rab1a	96	33.649	ENSPEMG00000023681	Rab36	79	33.649
ENSPEMG00000009340	Rab1a	83	43.429	ENSPEMG00000017646	Rab33b	76	43.429
ENSPEMG00000009340	Rab1a	95	38.579	ENSPEMG00000000644	Rab22a	97	38.579
ENSPEMG00000009340	Rab1a	76	38.994	ENSPEMG00000016854	Rab9	79	38.994
ENSPEMG00000009340	Rab1a	78	39.264	ENSPEMG00000010928	Rab7	79	39.264
ENSPEMG00000009340	Rab1a	78	30.303	ENSPEMG00000015746	Dnajc27	60	30.303
ENSPEMG00000009340	Rab1a	57	32.203	ENSPEMG00000016722	Arl8b	61	32.203
ENSPEMG00000009340	Rab1a	69	30.872	ENSPEMG00000018708	Arl4d	73	30.872
ENSPEMG00000009340	Rab1a	82	45.833	ENSPEMG00000007548	Rab25	79	45.833
ENSPEMG00000009340	Rab1a	95	38.384	ENSPEMG00000020880	Rab6a	94	38.384
ENSPEMG00000009340	Rab1a	69	30.496	ENSPEMG00000012608	Arl3	72	30.496
ENSPEMG00000009340	Rab1a	52	67.925	ENSPEMG00000017353	-	80	67.925
ENSPEMG00000009340	Rab1a	57	31.933	ENSPEMG00000016238	Arl4a	59	31.933
ENSPEMG00000009340	Rab1a	80	47.619	ENSPEMG00000010237	Rab33a	71	47.619

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPEMG00000009340	Rab1a	100	100.000	ENSG00000138069	RAB1A	100	100.000	Homo_sapiens
ENSPEMG00000009340	Rab1a	99	95.545	ENSAPOG00000008143	-	100	95.545	Acanthochromis_polyacanthus
ENSPEMG00000009340	Rab1a	100	100.000	ENSAMEG00000001127	RAB1A	100	100.000	Ailuropoda_melanoleuca
ENSPEMG00000009340	Rab1a	99	95.545	ENSAOCG00000020606	-	100	95.545	Amphiprion_ocellaris
ENSPEMG00000009340	Rab1a	99	95.545	ENSAPEG00000022488	-	100	95.545	Amphiprion_percula
ENSPEMG00000009340	Rab1a	100	100.000	ENSANAG00000020929	RAB1A	100	100.000	Aotus_nancymaae
ENSPEMG00000009340	Rab1a	99	96.040	ENSACLG00000003326	-	100	96.040	Astatotilapia_calliptera
ENSPEMG00000009340	Rab1a	99	94.554	ENSAMXG00000034850	-	100	94.554	Astyanax_mexicanus
ENSPEMG00000009340	Rab1a	100	100.000	ENSBTAG00000016720	RAB1A	100	100.000	Bos_taurus
ENSPEMG00000009340	Rab1a	100	100.000	ENSCJAG00000046275	RAB1A	100	100.000	Callithrix_jacchus
ENSPEMG00000009340	Rab1a	100	100.000	ENSCAFG00000003187	RAB1A	100	100.000	Canis_familiaris
ENSPEMG00000009340	Rab1a	100	100.000	ENSCAFG00020026971	RAB1A	100	100.000	Canis_lupus_dingo
ENSPEMG00000009340	Rab1a	97	100.000	ENSCHIG00000014060	RAB1A	96	100.000	Capra_hircus
ENSPEMG00000009340	Rab1a	100	98.049	ENSTSYG00000005996	RAB1A	100	100.000	Carlito_syrichta
ENSPEMG00000009340	Rab1a	100	100.000	ENSCPOG00000015437	RAB1A	100	100.000	Cavia_porcellus
ENSPEMG00000009340	Rab1a	100	100.000	ENSCCAG00000021869	RAB1A	100	100.000	Cebus_capucinus
ENSPEMG00000009340	Rab1a	100	100.000	ENSCATG00000030853	RAB1A	100	100.000	Cercocebus_atys
ENSPEMG00000009340	Rab1a	100	100.000	ENSCLAG00000014766	RAB1A	100	100.000	Chinchilla_lanigera
ENSPEMG00000009340	Rab1a	100	99.512	ENSCPBG00000013243	RAB1A	100	99.512	Chrysemys_picta_bellii
ENSPEMG00000009340	Rab1a	100	97.561	ENSCANG00000035916	RAB1A	100	97.561	Colobus_angolensis_palliatus
ENSPEMG00000009340	Rab1a	100	100.000	ENSCGRG00001012691	-	100	100.000	Cricetulus_griseus_chok1gshd
ENSPEMG00000009340	Rab1a	100	100.000	ENSCGRG00000008456	-	100	100.000	Cricetulus_griseus_crigri
ENSPEMG00000009340	Rab1a	100	100.000	ENSDNOG00000018236	RAB1A	100	100.000	Dasypus_novemcinctus
ENSPEMG00000009340	Rab1a	100	100.000	ENSDORG00000028628	-	100	100.000	Dipodomys_ordii
ENSPEMG00000009340	Rab1a	100	84.466	FBgn0285937	Rab1	100	84.466	Drosophila_melanogaster
ENSPEMG00000009340	Rab1a	99	100.000	ENSETEG00000002205	RAB1A	100	100.000	Echinops_telfairi
ENSPEMG00000009340	Rab1a	100	100.000	ENSEASG00005007298	RAB1A	100	100.000	Equus_asinus_asinus
ENSPEMG00000009340	Rab1a	100	100.000	ENSECAG00000009926	RAB1A	100	100.000	Equus_caballus
ENSPEMG00000009340	Rab1a	99	100.000	ENSEEUG00000011721	RAB1A	100	100.000	Erinaceus_europaeus
ENSPEMG00000009340	Rab1a	99	95.588	ENSELUG00000012166	RAB1A	96	95.588	Esox_lucius
ENSPEMG00000009340	Rab1a	100	100.000	ENSFCAG00000002536	RAB1A	100	100.000	Felis_catus
ENSPEMG00000009340	Rab1a	99	98.030	ENSFALG00000013624	RAB1A	99	98.030	Ficedula_albicollis
ENSPEMG00000009340	Rab1a	100	100.000	ENSFDAG00000019505	-	100	100.000	Fukomys_damarensis
ENSPEMG00000009340	Rab1a	99	94.554	ENSFHEG00000014414	-	100	94.554	Fundulus_heteroclitus
ENSPEMG00000009340	Rab1a	100	99.512	ENSGALG00000031582	RAB1A	100	99.512	Gallus_gallus
ENSPEMG00000009340	Rab1a	99	94.554	ENSGAFG00000000918	-	100	94.554	Gambusia_affinis
ENSPEMG00000009340	Rab1a	100	99.512	ENSGAGG00000006802	RAB1A	100	99.512	Gopherus_agassizii
ENSPEMG00000009340	Rab1a	100	100.000	ENSGGOG00000026603	RAB1A	100	100.000	Gorilla_gorilla
ENSPEMG00000009340	Rab1a	100	100.000	ENSHGLG00000013585	RAB1A	100	100.000	Heterocephalus_glaber_female
ENSPEMG00000009340	Rab1a	99	98.030	ENSHGLG00100007994	RAB1A	99	98.030	Heterocephalus_glaber_male
ENSPEMG00000009340	Rab1a	100	100.000	ENSSTOG00000020693	-	100	100.000	Ictidomys_tridecemlineatus
ENSPEMG00000009340	Rab1a	97	100.000	ENSJJAG00000014396	Rab1a	100	100.000	Jaculus_jaculus
ENSPEMG00000009340	Rab1a	97	95.431	ENSKMAG00000014038	-	93	95.431	Kryptolebias_marmoratus
ENSPEMG00000009340	Rab1a	99	95.050	ENSLBEG00000028426	RAB1A	100	95.050	Labrus_bergylta
ENSPEMG00000009340	Rab1a	100	98.537	ENSLACG00000012869	RAB1A	100	98.537	Latimeria_chalumnae
ENSPEMG00000009340	Rab1a	100	100.000	ENSLAFG00000016666	RAB1A	100	100.000	Loxodonta_africana
ENSPEMG00000009340	Rab1a	100	100.000	ENSMFAG00000046246	RAB1A	100	100.000	Macaca_fascicularis
ENSPEMG00000009340	Rab1a	97	100.000	ENSMMUG00000021721	RAB1A	91	100.000	Macaca_mulatta
ENSPEMG00000009340	Rab1a	95	99.485	ENSMNEG00000028414	-	97	99.485	Macaca_nemestrina
ENSPEMG00000009340	Rab1a	100	100.000	ENSMLEG00000042535	RAB1A	100	100.000	Mandrillus_leucophaeus
ENSPEMG00000009340	Rab1a	99	96.040	ENSMZEG00005013959	-	100	96.040	Maylandia_zebra
ENSPEMG00000009340	Rab1a	97	99.492	ENSMGAG00000004611	RAB1A	98	99.492	Meleagris_gallopavo
ENSPEMG00000009340	Rab1a	100	99.512	ENSMAUG00000012156	Rab1a	100	99.512	Mesocricetus_auratus
ENSPEMG00000009340	Rab1a	100	100.000	ENSMICG00000012587	RAB1A	100	100.000	Microcebus_murinus
ENSPEMG00000009340	Rab1a	100	99.512	ENSMOCG00000017022	Rab1a	100	99.512	Microtus_ochrogaster
ENSPEMG00000009340	Rab1a	99	93.564	ENSMMOG00000018709	RAB1A	100	93.564	Mola_mola
ENSPEMG00000009340	Rab1a	100	99.512	ENSMODG00000003340	RAB1A	100	99.512	Monodelphis_domestica
ENSPEMG00000009340	Rab1a	100	100.000	MGP_CAROLIEiJ_G0016115	Rab1a	100	100.000	Mus_caroli
ENSPEMG00000009340	Rab1a	100	100.000	ENSMUSG00000020149	Rab1a	100	100.000	Mus_musculus
ENSPEMG00000009340	Rab1a	100	100.000	MGP_PahariEiJ_G0016776	Rab1a	100	100.000	Mus_pahari
ENSPEMG00000009340	Rab1a	100	100.000	MGP_SPRETEiJ_G0016958	Rab1a	100	100.000	Mus_spretus
ENSPEMG00000009340	Rab1a	100	100.000	ENSMPUG00000006139	RAB1A	82	100.000	Mustela_putorius_furo
ENSPEMG00000009340	Rab1a	100	100.000	ENSMLUG00000009489	RAB1A	100	100.000	Myotis_lucifugus
ENSPEMG00000009340	Rab1a	100	100.000	ENSNGAG00000005838	Rab1a	100	100.000	Nannospalax_galili
ENSPEMG00000009340	Rab1a	99	96.040	ENSNBRG00000020492	-	100	96.040	Neolamprologus_brichardi
ENSPEMG00000009340	Rab1a	97	100.000	ENSOPRG00000006595	RAB1A	100	100.000	Ochotona_princeps
ENSPEMG00000009340	Rab1a	94	100.000	ENSODEG00000011248	-	96	100.000	Octodon_degus
ENSPEMG00000009340	Rab1a	99	93.627	ENSONIG00000006819	-	100	93.627	Oreochromis_niloticus
ENSPEMG00000009340	Rab1a	100	99.512	ENSOANG00000012438	RAB1A	100	99.512	Ornithorhynchus_anatinus
ENSPEMG00000009340	Rab1a	100	100.000	ENSOCUG00000017003	RAB1A	100	100.000	Oryctolagus_cuniculus
ENSPEMG00000009340	Rab1a	100	100.000	ENSOGAG00000026181	RAB1A	100	100.000	Otolemur_garnettii
ENSPEMG00000009340	Rab1a	97	100.000	ENSOARG00000019997	RAB1A	97	100.000	Ovis_aries
ENSPEMG00000009340	Rab1a	99	100.000	ENSPPAG00000030253	RAB1A	100	100.000	Pan_paniscus
ENSPEMG00000009340	Rab1a	100	100.000	ENSPPRG00000025077	RAB1A	100	100.000	Panthera_pardus
ENSPEMG00000009340	Rab1a	97	100.000	ENSPTIG00000013471	RAB1A	97	100.000	Panthera_tigris_altaica
ENSPEMG00000009340	Rab1a	100	100.000	ENSPTRG00000011989	RAB1A	100	100.000	Pan_troglodytes
ENSPEMG00000009340	Rab1a	100	100.000	ENSPANG00000010485	RAB1A	100	100.000	Papio_anubis
ENSPEMG00000009340	Rab1a	97	99.492	ENSPSIG00000008028	RAB1A	99	96.552	Pelodiscus_sinensis
ENSPEMG00000009340	Rab1a	99	95.588	ENSPMGG00000021015	-	99	95.588	Periophthalmus_magnuspinnatus
ENSPEMG00000009340	Rab1a	100	99.512	ENSPCIG00000023212	RAB1A	100	99.512	Phascolarctos_cinereus
ENSPEMG00000009340	Rab1a	99	93.137	ENSPFOG00000000498	-	99	93.137	Poecilia_formosa
ENSPEMG00000009340	Rab1a	99	94.059	ENSPLAG00000015592	-	100	94.059	Poecilia_latipinna
ENSPEMG00000009340	Rab1a	99	94.059	ENSPMEG00000005288	-	100	94.059	Poecilia_mexicana
ENSPEMG00000009340	Rab1a	100	100.000	ENSPPYG00000012360	RAB1A	100	100.000	Pongo_abelii
ENSPEMG00000009340	Rab1a	100	100.000	ENSPCOG00000017244	RAB1A	100	100.000	Propithecus_coquereli
ENSPEMG00000009340	Rab1a	99	96.040	ENSPNYG00000015841	-	100	96.040	Pundamilia_nyererei
ENSPEMG00000009340	Rab1a	100	100.000	ENSRNOG00000004992	Rab1a	100	100.000	Rattus_norvegicus
ENSPEMG00000009340	Rab1a	100	100.000	ENSSBOG00000023732	RAB1A	100	100.000	Saimiri_boliviensis_boliviensis
ENSPEMG00000009340	Rab1a	97	99.492	ENSSHAG00000003597	RAB1A	98	98.010	Sarcophilus_harrisii
ENSPEMG00000009340	Rab1a	99	95.545	ENSSMAG00000021049	-	100	95.545	Scophthalmus_maximus
ENSPEMG00000009340	Rab1a	99	96.040	ENSSDUG00000022535	RAB1A	100	96.040	Seriola_dumerili
ENSPEMG00000009340	Rab1a	100	99.512	ENSSPUG00000012822	RAB1A	100	99.512	Sphenodon_punctatus
ENSPEMG00000009340	Rab1a	99	95.545	ENSSPAG00000012564	-	100	95.545	Stegastes_partitus
ENSPEMG00000009340	Rab1a	100	100.000	ENSSSCG00000008359	RAB1A	100	100.000	Sus_scrofa
ENSPEMG00000009340	Rab1a	100	97.073	ENSTGUG00000002328	RAB1A	100	97.073	Taeniopygia_guttata
ENSPEMG00000009340	Rab1a	99	95.050	ENSTRUG00000024994	RAB1A	100	95.050	Takifugu_rubripes
ENSPEMG00000009340	Rab1a	99	99.005	ENSUMAG00000021038	RAB1A	99	100.000	Ursus_maritimus
ENSPEMG00000009340	Rab1a	97	99.495	ENSVPAG00000005640	RAB1A	99	99.495	Vicugna_pacos
ENSPEMG00000009340	Rab1a	100	100.000	ENSVVUG00000027588	RAB1A	100	100.000	Vulpes_vulpes
ENSPEMG00000009340	Rab1a	99	94.554	ENSXMAG00000015776	-	100	94.554	Xiphophorus_maculatus