EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPEMG00000009494 (Gene tree)
Gene ID: 102913463
Gene Symbol: Sf3a1
Alias: -
Full Name: splicing factor 3a subunit 1
Gene Type: protein_coding
Species: Peromyscus_maniculatus_bairdii
Status: putative
Strand: Plus strand
Length: 23209 bases
Position: chrKI615344.1:2629291-2652499
Accession: 102913463
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPEMP00000007584	PRP21_like_P	PF12230.8	8.8e-52	1	1
ENSPEMP00000007584	Surp	PF01805.20	6.7e-46	1	2
ENSPEMP00000007584	Surp	PF01805.20	6.7e-46	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPEMT00000011727	-	3202	XM_006972941	ENSPEMP00000007584	793 (aa)	XP_006973003	UPI00042AF550

Gene Model

Click here to download ENSPEMG00000009494's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPEMG00000009494's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPEMG00000009494	Sf3a1	100	98.487	ENSG00000099995	SF3A1	100	98.487	Homo_sapiens
ENSPEMG00000009494	Sf3a1	100	83.396	ENSAPOG00000020465	sf3a1	97	86.316	Acanthochromis_polyacanthus
ENSPEMG00000009494	Sf3a1	100	98.113	ENSAMEG00000007737	SF3A1	100	98.113	Ailuropoda_melanoleuca
ENSPEMG00000009494	Sf3a1	100	84.403	ENSACIG00000020672	sf3a1	97	86.447	Amphilophus_citrinellus
ENSPEMG00000009494	Sf3a1	100	83.019	ENSAOCG00000003060	sf3a1	97	86.053	Amphiprion_ocellaris
ENSPEMG00000009494	Sf3a1	100	83.145	ENSAPEG00000010735	sf3a1	97	86.184	Amphiprion_percula
ENSPEMG00000009494	Sf3a1	96	85.417	ENSATEG00000021201	sf3a1	96	86.053	Anabas_testudineus
ENSPEMG00000009494	Sf3a1	95	94.055	ENSAPLG00000009057	SF3A1	98	93.963	Anas_platyrhynchos
ENSPEMG00000009494	Sf3a1	100	85.714	ENSACAG00000009415	SF3A1	100	87.069	Anolis_carolinensis
ENSPEMG00000009494	Sf3a1	100	98.613	ENSANAG00000032045	SF3A1	100	98.613	Aotus_nancymaae
ENSPEMG00000009494	Sf3a1	100	84.005	ENSACLG00000012622	sf3a1	97	86.298	Astatotilapia_calliptera
ENSPEMG00000009494	Sf3a1	99	83.186	ENSAMXG00000005382	sf3a1	97	85.321	Astyanax_mexicanus
ENSPEMG00000009494	Sf3a1	100	98.865	ENSBTAG00000003390	SF3A1	100	98.865	Bos_taurus
ENSPEMG00000009494	Sf3a1	84	43.627	WBGene00004188	prp-21	92	43.911	Caenorhabditis_elegans
ENSPEMG00000009494	Sf3a1	100	98.739	ENSCJAG00000010370	SF3A1	100	98.739	Callithrix_jacchus
ENSPEMG00000009494	Sf3a1	100	98.613	ENSCAFG00000012559	SF3A1	100	98.613	Canis_familiaris
ENSPEMG00000009494	Sf3a1	100	98.613	ENSCAFG00020000838	SF3A1	100	98.613	Canis_lupus_dingo
ENSPEMG00000009494	Sf3a1	100	98.739	ENSCHIG00000018642	SF3A1	100	98.739	Capra_hircus
ENSPEMG00000009494	Sf3a1	100	98.991	ENSTSYG00000004739	SF3A1	100	98.991	Carlito_syrichta
ENSPEMG00000009494	Sf3a1	94	81.041	ENSCAPG00000015414	SF3A1	97	81.216	Cavia_aperea
ENSPEMG00000009494	Sf3a1	100	98.487	ENSCPOG00000014589	SF3A1	100	98.487	Cavia_porcellus
ENSPEMG00000009494	Sf3a1	100	98.613	ENSCCAG00000032006	SF3A1	100	98.613	Cebus_capucinus
ENSPEMG00000009494	Sf3a1	100	98.865	ENSCATG00000029241	SF3A1	100	98.865	Cercocebus_atys
ENSPEMG00000009494	Sf3a1	100	98.108	ENSCLAG00000006508	SF3A1	100	98.108	Chinchilla_lanigera
ENSPEMG00000009494	Sf3a1	100	98.739	ENSCSAG00000009470	SF3A1	100	98.739	Chlorocebus_sabaeus
ENSPEMG00000009494	Sf3a1	61	98.165	ENSCHOG00000005201	SF3A1	69	98.165	Choloepus_hoffmanni
ENSPEMG00000009494	Sf3a1	100	91.058	ENSCPBG00000007595	SF3A1	100	91.184	Chrysemys_picta_bellii
ENSPEMG00000009494	Sf3a1	96	53.040	ENSCING00000008526	-	65	58.221	Ciona_intestinalis
ENSPEMG00000009494	Sf3a1	96	52.000	ENSCSAVG00000005608	-	90	65.179	Ciona_savignyi
ENSPEMG00000009494	Sf3a1	100	98.739	ENSCANG00000033564	SF3A1	100	98.739	Colobus_angolensis_palliatus
ENSPEMG00000009494	Sf3a1	100	99.748	ENSCGRG00001008933	Sf3a1	100	99.748	Cricetulus_griseus_chok1gshd
ENSPEMG00000009494	Sf3a1	100	99.748	ENSCGRG00000006127	Sf3a1	100	99.748	Cricetulus_griseus_crigri
ENSPEMG00000009494	Sf3a1	100	81.658	ENSCSEG00000010792	sf3a1	97	83.706	Cynoglossus_semilaevis
ENSPEMG00000009494	Sf3a1	100	82.893	ENSCVAG00000004560	sf3a1	97	84.474	Cyprinodon_variegatus
ENSPEMG00000009494	Sf3a1	100	82.161	ENSDARG00000041887	sf3a1	97	84.757	Danio_rerio
ENSPEMG00000009494	Sf3a1	100	98.365	ENSDNOG00000010629	SF3A1	100	98.365	Dasypus_novemcinctus
ENSPEMG00000009494	Sf3a1	100	98.739	ENSDORG00000005613	Sf3a1	100	98.739	Dipodomys_ordii
ENSPEMG00000009494	Sf3a1	79	61.495	FBgn0266917	Sf3a1	82	60.332	Drosophila_melanogaster
ENSPEMG00000009494	Sf3a1	89	95.869	ENSETEG00000017194	SF3A1	100	95.869	Echinops_telfairi
ENSPEMG00000009494	Sf3a1	98	66.102	ENSEBUG00000001285	sf3a1	76	68.297	Eptatretus_burgeri
ENSPEMG00000009494	Sf3a1	100	98.991	ENSEASG00005010254	SF3A1	100	98.991	Equus_asinus_asinus
ENSPEMG00000009494	Sf3a1	100	98.991	ENSECAG00000023962	SF3A1	100	98.991	Equus_caballus
ENSPEMG00000009494	Sf3a1	73	93.834	ENSEEUG00000003159	SF3A1	82	93.762	Erinaceus_europaeus
ENSPEMG00000009494	Sf3a1	100	82.206	ENSELUG00000022578	sf3a1	97	83.617	Esox_lucius
ENSPEMG00000009494	Sf3a1	100	98.613	ENSFCAG00000011932	SF3A1	100	98.613	Felis_catus
ENSPEMG00000009494	Sf3a1	95	93.122	ENSFALG00000006944	SF3A1	96	93.298	Ficedula_albicollis
ENSPEMG00000009494	Sf3a1	100	98.613	ENSFDAG00000009560	SF3A1	100	98.613	Fukomys_damarensis
ENSPEMG00000009494	Sf3a1	100	84.025	ENSFHEG00000010866	sf3a1	97	85.658	Fundulus_heteroclitus
ENSPEMG00000009494	Sf3a1	100	80.730	ENSGMOG00000016024	sf3a1	97	81.070	Gadus_morhua
ENSPEMG00000009494	Sf3a1	95	94.048	ENSGALG00000007937	SF3A1	96	93.955	Gallus_gallus
ENSPEMG00000009494	Sf3a1	100	83.396	ENSGAFG00000009111	sf3a1	97	84.737	Gambusia_affinis
ENSPEMG00000009494	Sf3a1	100	82.116	ENSGACG00000011893	sf3a1	96	83.663	Gasterosteus_aculeatus
ENSPEMG00000009494	Sf3a1	96	91.064	ENSGAGG00000000762	SF3A1	99	91.196	Gopherus_agassizii
ENSPEMG00000009494	Sf3a1	100	98.487	ENSGGOG00000012631	SF3A1	100	98.487	Gorilla_gorilla
ENSPEMG00000009494	Sf3a1	100	84.005	ENSHBUG00000015795	sf3a1	97	86.298	Haplochromis_burtoni
ENSPEMG00000009494	Sf3a1	100	98.865	ENSHGLG00000007907	SF3A1	100	98.865	Heterocephalus_glaber_female
ENSPEMG00000009494	Sf3a1	100	98.865	ENSHGLG00100013799	SF3A1	100	98.865	Heterocephalus_glaber_male
ENSPEMG00000009494	Sf3a1	100	80.126	ENSHCOG00000015423	sf3a1	97	81.579	Hippocampus_comes
ENSPEMG00000009494	Sf3a1	96	82.422	ENSIPUG00000002470	sf3a1	98	82.808	Ictalurus_punctatus
ENSPEMG00000009494	Sf3a1	100	98.991	ENSSTOG00000013892	SF3A1	100	98.991	Ictidomys_tridecemlineatus
ENSPEMG00000009494	Sf3a1	100	98.866	ENSJJAG00000022566	Sf3a1	100	98.866	Jaculus_jaculus
ENSPEMG00000009494	Sf3a1	100	82.642	ENSKMAG00000002400	sf3a1	97	85.263	Kryptolebias_marmoratus
ENSPEMG00000009494	Sf3a1	100	82.264	ENSLBEG00000022974	sf3a1	97	84.079	Labrus_bergylta
ENSPEMG00000009494	Sf3a1	100	87.327	ENSLACG00000003565	SF3A1	96	88.583	Latimeria_chalumnae
ENSPEMG00000009494	Sf3a1	100	84.962	ENSLOCG00000008251	sf3a1	96	86.894	Lepisosteus_oculatus
ENSPEMG00000009494	Sf3a1	100	98.487	ENSLAFG00000000448	SF3A1	100	98.487	Loxodonta_africana
ENSPEMG00000009494	Sf3a1	98	61.656	ENSLAFG00000026032	-	96	61.558	Loxodonta_africana
ENSPEMG00000009494	Sf3a1	100	98.613	ENSMFAG00000031979	SF3A1	100	98.613	Macaca_fascicularis
ENSPEMG00000009494	Sf3a1	100	98.613	ENSMMUG00000005547	SF3A1	100	98.613	Macaca_mulatta
ENSPEMG00000009494	Sf3a1	100	98.487	ENSMNEG00000037229	SF3A1	100	98.487	Macaca_nemestrina
ENSPEMG00000009494	Sf3a1	100	98.739	ENSMLEG00000041908	SF3A1	100	98.739	Mandrillus_leucophaeus
ENSPEMG00000009494	Sf3a1	97	85.382	ENSMAMG00000006460	sf3a1	95	86.711	Mastacembelus_armatus
ENSPEMG00000009494	Sf3a1	100	84.005	ENSMZEG00005009633	sf3a1	97	86.298	Maylandia_zebra
ENSPEMG00000009494	Sf3a1	95	94.048	ENSMGAG00000001330	SF3A1	99	93.955	Meleagris_gallopavo
ENSPEMG00000009494	Sf3a1	92	96.038	ENSMAUG00000020317	Sf3a1	94	96.038	Mesocricetus_auratus
ENSPEMG00000009494	Sf3a1	100	98.487	ENSMICG00000010038	SF3A1	100	98.487	Microcebus_murinus
ENSPEMG00000009494	Sf3a1	100	99.874	ENSMOCG00000008438	Sf3a1	100	99.874	Microtus_ochrogaster
ENSPEMG00000009494	Sf3a1	100	81.132	ENSMMOG00000015588	sf3a1	96	82.895	Mola_mola
ENSPEMG00000009494	Sf3a1	100	97.478	ENSMODG00000009270	SF3A1	100	97.478	Monodelphis_domestica
ENSPEMG00000009494	Sf3a1	100	84.383	ENSMALG00000000148	sf3a1	99	85.831	Monopterus_albus
ENSPEMG00000009494	Sf3a1	100	98.865	MGP_CAROLIEiJ_G0016029	Sf3a1	100	98.865	Mus_caroli
ENSPEMG00000009494	Sf3a1	100	98.865	ENSMUSG00000002129	Sf3a1	100	98.865	Mus_musculus
ENSPEMG00000009494	Sf3a1	100	98.865	MGP_PahariEiJ_G0016862	Sf3a1	100	98.865	Mus_pahari
ENSPEMG00000009494	Sf3a1	100	98.865	MGP_SPRETEiJ_G0016870	Sf3a1	100	98.865	Mus_spretus
ENSPEMG00000009494	Sf3a1	100	98.613	ENSMPUG00000013144	SF3A1	100	98.613	Mustela_putorius_furo
ENSPEMG00000009494	Sf3a1	100	98.739	ENSMLUG00000002139	SF3A1	100	98.739	Myotis_lucifugus
ENSPEMG00000009494	Sf3a1	100	99.117	ENSNGAG00000016977	Sf3a1	100	99.117	Nannospalax_galili
ENSPEMG00000009494	Sf3a1	100	83.396	ENSNBRG00000016642	sf3a1	96	86.298	Neolamprologus_brichardi
ENSPEMG00000009494	Sf3a1	100	98.739	ENSNLEG00000003686	SF3A1	100	98.739	Nomascus_leucogenys
ENSPEMG00000009494	Sf3a1	96	87.763	ENSMEUG00000008741	SF3A1	100	87.500	Notamacropus_eugenii
ENSPEMG00000009494	Sf3a1	100	97.982	ENSOPRG00000016636	SF3A1	100	97.982	Ochotona_princeps
ENSPEMG00000009494	Sf3a1	100	98.613	ENSODEG00000002571	SF3A1	100	98.613	Octodon_degus
ENSPEMG00000009494	Sf3a1	100	83.855	ENSONIG00000010848	sf3a1	97	85.658	Oreochromis_niloticus
ENSPEMG00000009494	Sf3a1	100	98.487	ENSOCUG00000007633	SF3A1	100	98.487	Oryctolagus_cuniculus
ENSPEMG00000009494	Sf3a1	96	82.021	ENSORLG00000013050	sf3a1	96	85.144	Oryzias_latipes
ENSPEMG00000009494	Sf3a1	99	80.506	ENSORLG00020003236	sf3a1	94	83.311	Oryzias_latipes_hni
ENSPEMG00000009494	Sf3a1	100	82.138	ENSORLG00015017411	sf3a1	97	85.000	Oryzias_latipes_hsok
ENSPEMG00000009494	Sf3a1	100	82.642	ENSOMEG00000013362	sf3a1	97	84.605	Oryzias_melastigma
ENSPEMG00000009494	Sf3a1	100	98.361	ENSOGAG00000012931	SF3A1	100	98.361	Otolemur_garnettii
ENSPEMG00000009494	Sf3a1	100	96.974	ENSOARG00000006849	SF3A1	100	96.974	Ovis_aries
ENSPEMG00000009494	Sf3a1	100	97.478	ENSPPAG00000041790	SF3A1	100	97.478	Pan_paniscus
ENSPEMG00000009494	Sf3a1	100	98.613	ENSPPRG00000004391	SF3A1	100	98.613	Panthera_pardus
ENSPEMG00000009494	Sf3a1	97	98.575	ENSPTIG00000000844	SF3A1	100	98.575	Panthera_tigris_altaica
ENSPEMG00000009494	Sf3a1	100	98.487	ENSPTRG00000014240	SF3A1	100	98.487	Pan_troglodytes
ENSPEMG00000009494	Sf3a1	100	98.739	ENSPANG00000020772	SF3A1	100	98.739	Papio_anubis
ENSPEMG00000009494	Sf3a1	83	92.308	ENSPSIG00000012803	SF3A1	94	95.577	Pelodiscus_sinensis
ENSPEMG00000009494	Sf3a1	96	84.293	ENSPMGG00000023096	sf3a1	99	83.794	Periophthalmus_magnuspinnatus
ENSPEMG00000009494	Sf3a1	69	78.040	ENSPMAG00000007139	-	87	80.539	Petromyzon_marinus
ENSPEMG00000009494	Sf3a1	100	97.226	ENSPCIG00000022692	SF3A1	100	97.226	Phascolarctos_cinereus
ENSPEMG00000009494	Sf3a1	100	74.623	ENSPFOG00000016768	sf3a1	93	78.367	Poecilia_formosa
ENSPEMG00000009494	Sf3a1	100	83.522	ENSPLAG00000017268	sf3a1	97	85.000	Poecilia_latipinna
ENSPEMG00000009494	Sf3a1	84	85.693	ENSPMEG00000019811	sf3a1	98	84.639	Poecilia_mexicana
ENSPEMG00000009494	Sf3a1	100	83.648	ENSPREG00000010347	sf3a1	97	85.526	Poecilia_reticulata
ENSPEMG00000009494	Sf3a1	100	98.739	ENSPPYG00000011707	SF3A1	100	98.739	Pongo_abelii
ENSPEMG00000009494	Sf3a1	57	99.170	ENSPCAG00000003266	SF3A1	57	99.170	Procavia_capensis
ENSPEMG00000009494	Sf3a1	100	98.739	ENSPCOG00000026630	SF3A1	100	98.739	Propithecus_coquereli
ENSPEMG00000009494	Sf3a1	100	94.578	ENSPVAG00000017719	SF3A1	94	97.987	Pteropus_vampyrus
ENSPEMG00000009494	Sf3a1	100	84.005	ENSPNYG00000018706	sf3a1	97	86.298	Pundamilia_nyererei
ENSPEMG00000009494	Sf3a1	96	84.395	ENSPNAG00000003721	sf3a1	97	84.404	Pygocentrus_nattereri
ENSPEMG00000009494	Sf3a1	100	98.991	ENSRNOG00000005218	Sf3a1	100	98.991	Rattus_norvegicus
ENSPEMG00000009494	Sf3a1	100	98.613	ENSRBIG00000032167	SF3A1	100	98.613	Rhinopithecus_bieti
ENSPEMG00000009494	Sf3a1	100	98.613	ENSRROG00000044908	SF3A1	100	98.613	Rhinopithecus_roxellana
ENSPEMG00000009494	Sf3a1	97	94.574	ENSSBOG00000021960	SF3A1	100	98.818	Saimiri_boliviensis_boliviensis
ENSPEMG00000009494	Sf3a1	99	93.038	ENSSHAG00000003666	SF3A1	96	95.000	Sarcophilus_harrisii
ENSPEMG00000009494	Sf3a1	100	83.104	ENSSFOG00015004579	sf3a1	97	85.864	Scleropages_formosus
ENSPEMG00000009494	Sf3a1	100	81.384	ENSSMAG00000004275	sf3a1	97	83.421	Scophthalmus_maximus
ENSPEMG00000009494	Sf3a1	100	83.522	ENSSDUG00000022219	sf3a1	97	85.395	Seriola_dumerili
ENSPEMG00000009494	Sf3a1	100	83.522	ENSSLDG00000012642	sf3a1	97	85.395	Seriola_lalandi_dorsalis
ENSPEMG00000009494	Sf3a1	97	95.207	ENSSARG00000005960	SF3A1	98	95.526	Sorex_araneus
ENSPEMG00000009494	Sf3a1	96	91.969	ENSSPUG00000018863	SF3A1	96	93.126	Sphenodon_punctatus
ENSPEMG00000009494	Sf3a1	100	84.151	ENSSPAG00000011856	sf3a1	97	86.053	Stegastes_partitus
ENSPEMG00000009494	Sf3a1	100	98.739	ENSSSCG00000010002	SF3A1	100	98.739	Sus_scrofa
ENSPEMG00000009494	Sf3a1	95	94.063	ENSTGUG00000010547	SF3A1	99	93.971	Taeniopygia_guttata
ENSPEMG00000009494	Sf3a1	100	81.533	ENSTRUG00000006118	sf3a1	97	82.368	Takifugu_rubripes
ENSPEMG00000009494	Sf3a1	64	81.413	ENSTNIG00000005713	sf3a1	81	84.821	Tetraodon_nigroviridis
ENSPEMG00000009494	Sf3a1	100	91.551	ENSTBEG00000012771	SF3A1	100	91.551	Tupaia_belangeri
ENSPEMG00000009494	Sf3a1	100	98.489	ENSTTRG00000001535	SF3A1	100	98.489	Tursiops_truncatus
ENSPEMG00000009494	Sf3a1	99	97.713	ENSUAMG00000006750	SF3A1	99	97.713	Ursus_americanus
ENSPEMG00000009494	Sf3a1	99	97.704	ENSUMAG00000016665	SF3A1	99	97.704	Ursus_maritimus
ENSPEMG00000009494	Sf3a1	100	98.613	ENSVVUG00000003075	SF3A1	100	98.613	Vulpes_vulpes
ENSPEMG00000009494	Sf3a1	100	85.947	ENSXETG00000016144	sf3a1	96	87.402	Xenopus_tropicalis
ENSPEMG00000009494	Sf3a1	100	83.145	ENSXCOG00000015653	sf3a1	97	84.474	Xiphophorus_couchianus
ENSPEMG00000009494	Sf3a1	100	83.270	ENSXMAG00000002753	sf3a1	97	84.605	Xiphophorus_maculatus