EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPEMG00000009604 (Gene tree)
Gene ID: 102911010
Gene Symbol: -
Alias: -
Full Name: family with sequence similarity 172 member A
Gene Type: protein_coding
Species: Peromyscus_maniculatus_bairdii
Status: putative
Strand: Minus strand
Length: 411675 bases
Position: chrKI615616.1:1934092-2345766
Accession: 102911010
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPEMP00000007737	Arb2	PF09757.9	1.9e-09	1	1
ENSPEMP00000007746	Arb2	PF09757.9	2.3e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPEMT00000011891	-	918	XM_016005066	ENSPEMP00000007746	305 (aa)	XP_015860552	-
ENSPEMT00000011882	-	1248	XM_006986533	ENSPEMP00000007737	415 (aa)	XP_006986595	UPI00042AB969

Gene Model

Click here to download ENSPEMG00000009604's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPEMG00000009604's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPEMG00000009604	-	100	97.468	ENSG00000113391	FAM172A	100	97.468	Homo_sapiens
ENSPEMG00000009604	-	73	37.719	ENSAPLG00000011555	-	97	38.696	Anas_platyrhynchos
ENSPEMG00000009604	-	100	87.342	ENSAPLG00000004055	FAM172A	100	84.615	Anas_platyrhynchos
ENSPEMG00000009604	-	88	88.608	ENSACAG00000013305	FAM172A	98	85.450	Anolis_carolinensis
ENSPEMG00000009604	-	89	86.792	ENSANAG00000035869	FAM172A	95	86.911	Aotus_nancymaae
ENSPEMG00000009604	-	100	98.734	ENSBTAG00000050195	FAM172A	100	94.952	Bos_taurus
ENSPEMG00000009604	-	100	98.734	ENSCJAG00000010444	FAM172A	100	95.192	Callithrix_jacchus
ENSPEMG00000009604	-	85	98.734	ENSCAFG00000008064	FAM172A	99	95.676	Canis_familiaris
ENSPEMG00000009604	-	100	98.734	ENSCAFG00020006210	FAM172A	100	94.471	Canis_lupus_dingo
ENSPEMG00000009604	-	100	98.734	ENSCHIG00000008440	FAM172A	100	94.952	Capra_hircus
ENSPEMG00000009604	-	66	95.455	ENSTSYG00000006286	FAM172A	85	94.361	Carlito_syrichta
ENSPEMG00000009604	-	63	97.500	ENSCAPG00000014103	-	100	97.500	Cavia_aperea
ENSPEMG00000009604	-	100	98.734	ENSCCAG00000023116	FAM172A	100	94.865	Cebus_capucinus
ENSPEMG00000009604	-	100	97.468	ENSCLAG00000005472	FAM172A	100	97.468	Chinchilla_lanigera
ENSPEMG00000009604	-	96	35.569	ENSCPBG00000004402	-	96	44.173	Chrysemys_picta_bellii
ENSPEMG00000009604	-	65	94.074	ENSCANG00000040412	FAM172A	92	94.074	Colobus_angolensis_palliatus
ENSPEMG00000009604	-	100	97.468	ENSDNOG00000004689	FAM172A	100	94.952	Dasypus_novemcinctus
ENSPEMG00000009604	-	67	93.011	ENSDORG00000013558	Fam172a	88	94.815	Dipodomys_ordii
ENSPEMG00000009604	-	79	40.122	ENSEBUG00000016097	-	62	40.122	Eptatretus_burgeri
ENSPEMG00000009604	-	100	96.203	ENSECAG00000018274	FAM172A	100	91.827	Equus_caballus
ENSPEMG00000009604	-	89	91.810	ENSEEUG00000002887	FAM172A	100	81.971	Erinaceus_europaeus
ENSPEMG00000009604	-	99	79.747	ENSELUG00000017647	fam172a	96	68.473	Esox_lucius
ENSPEMG00000009604	-	100	98.734	ENSFCAG00000025443	FAM172A	100	95.192	Felis_catus
ENSPEMG00000009604	-	95	35.866	ENSFALG00000006501	-	100	44.134	Ficedula_albicollis
ENSPEMG00000009604	-	85	87.887	ENSFALG00000009072	FAM172A	95	87.887	Ficedula_albicollis
ENSPEMG00000009604	-	100	86.638	ENSGALG00000014661	FAM172A	100	84.856	Gallus_gallus
ENSPEMG00000009604	-	100	91.139	ENSGAGG00000003839	FAM172A	100	88.462	Gopherus_agassizii
ENSPEMG00000009604	-	84	45.326	ENSGAGG00000022828	-	93	45.326	Gopherus_agassizii
ENSPEMG00000009604	-	100	98.734	ENSGGOG00000010296	FAM172A	100	94.952	Gorilla_gorilla
ENSPEMG00000009604	-	100	96.203	ENSHGLG00000011178	FAM172A	100	96.203	Heterocephalus_glaber_female
ENSPEMG00000009604	-	85	96.203	ENSHGLG00100013340	FAM172A	100	96.203	Heterocephalus_glaber_male
ENSPEMG00000009604	-	100	98.734	ENSSTOG00000009918	FAM172A	100	94.952	Ictidomys_tridecemlineatus
ENSPEMG00000009604	-	88	48.087	ENSLACG00000001532	si:ch73-41e3.7	96	48.087	Latimeria_chalumnae
ENSPEMG00000009604	-	100	74.463	ENSLOCG00000001629	fam172a	100	74.463	Lepisosteus_oculatus
ENSPEMG00000009604	-	65	94.074	ENSMFAG00000001171	FAM172A	92	94.074	Macaca_fascicularis
ENSPEMG00000009604	-	100	98.734	ENSMNEG00000039938	FAM172A	92	94.074	Macaca_nemestrina
ENSPEMG00000009604	-	76	34.894	ENSMGAG00000016079	-	99	34.894	Meleagris_gallopavo
ENSPEMG00000009604	-	100	98.734	ENSMICG00000030403	FAM172A	100	95.673	Microcebus_murinus
ENSPEMG00000009604	-	100	98.734	ENSMOCG00000003613	Fam172a	100	97.027	Microtus_ochrogaster
ENSPEMG00000009604	-	100	92.405	ENSMODG00000020131	FAM172A	100	88.462	Monodelphis_domestica
ENSPEMG00000009604	-	100	96.732	MGP_PahariEiJ_G0015818	Fam172a	100	96.732	Mus_pahari
ENSPEMG00000009604	-	100	97.468	ENSNGAG00000019570	Fam172a	100	96.486	Nannospalax_galili
ENSPEMG00000009604	-	68	91.444	ENSNLEG00000013903	FAM172A	89	94.074	Nomascus_leucogenys
ENSPEMG00000009604	-	89	87.838	ENSOANG00000011068	FAM172A	99	87.838	Ornithorhynchus_anatinus
ENSPEMG00000009604	-	96	98.734	ENSOCUG00000007299	FAM172A	96	94.815	Oryctolagus_cuniculus
ENSPEMG00000009604	-	97	93.086	ENSOGAG00000015189	FAM172A	100	93.029	Otolemur_garnettii
ENSPEMG00000009604	-	89	98.734	ENSOARG00000016711	FAM172A	87	91.906	Ovis_aries
ENSPEMG00000009604	-	65	93.704	ENSPPAG00000030542	FAM172A	92	93.704	Pan_paniscus
ENSPEMG00000009604	-	100	98.734	ENSPPRG00000006653	FAM172A	100	95.192	Panthera_pardus
ENSPEMG00000009604	-	100	98.734	ENSPTIG00000012681	FAM172A	100	95.192	Panthera_tigris_altaica
ENSPEMG00000009604	-	65	93.704	ENSPTRG00000017074	FAM172A	92	93.704	Pan_troglodytes
ENSPEMG00000009604	-	65	94.074	ENSPANG00000011687	FAM172A	92	94.074	Papio_anubis
ENSPEMG00000009604	-	97	72.660	ENSPKIG00000012314	fam172a	100	76.699	Paramormyrops_kingsleyae
ENSPEMG00000009604	-	52	93.125	ENSPSIG00000010144	-	100	93.125	Pelodiscus_sinensis
ENSPEMG00000009604	-	100	93.671	ENSPCIG00000028612	FAM172A	100	88.221	Phascolarctos_cinereus
ENSPEMG00000009604	-	78	91.597	ENSPCOG00000024072	FAM172A	96	91.597	Propithecus_coquereli
ENSPEMG00000009604	-	65	94.796	ENSRNOG00000013844	Fam172a	99	94.796	Rattus_norvegicus
ENSPEMG00000009604	-	57	89.773	ENSRBIG00000028680	-	78	89.773	Rhinopithecus_bieti
ENSPEMG00000009604	-	65	94.074	ENSRROG00000023807	FAM172A	92	94.074	Rhinopithecus_roxellana
ENSPEMG00000009604	-	100	98.734	ENSSBOG00000019860	FAM172A	100	94.952	Saimiri_boliviensis_boliviensis
ENSPEMG00000009604	-	100	91.139	ENSSHAG00000013743	FAM172A	100	88.221	Sarcophilus_harrisii
ENSPEMG00000009604	-	100	88.608	ENSSPUG00000008161	FAM172A	100	85.577	Sphenodon_punctatus
ENSPEMG00000009604	-	100	98.734	ENSSSCG00000027608	FAM172A	100	95.946	Sus_scrofa
ENSPEMG00000009604	-	88	62.295	ENSTGUG00000013623	-	100	45.882	Taeniopygia_guttata
ENSPEMG00000009604	-	91	85.789	ENSTGUG00000000715	FAM172A	100	85.789	Taeniopygia_guttata
ENSPEMG00000009604	-	77	79.747	ENSTNIG00000009902	fam172a	99	59.337	Tetraodon_nigroviridis
ENSPEMG00000009604	-	100	93.671	ENSTTRG00000001521	FAM172A	100	91.587	Tursiops_truncatus
ENSPEMG00000009604	-	100	98.734	ENSUMAG00000005442	FAM172A	100	95.433	Ursus_maritimus
ENSPEMG00000009604	-	100	98.734	ENSVVUG00000022112	FAM172A	100	94.471	Vulpes_vulpes
ENSPEMG00000009604	-	98	39.306	ENSXETG00000033027	-	100	42.932	Xenopus_tropicalis
ENSPEMG00000009604	-	100	78.910	ENSXETG00000011592	fam172a	100	78.910	Xenopus_tropicalis