EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPEMG00000009762 (Gene tree)
Gene ID: 102924898
Gene Symbol: Zc3h4
Alias: -
Full Name: zinc finger CCCH-type containing 4
Gene Type: protein_coding
Species: Peromyscus_maniculatus_bairdii
Status: putative
Strand: Plus strand
Length: 35331 bases
Position: chrKI615844.1:508012-543342
Accession: 102924898
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPEMP00000007988	zf-CCCH	PF00642.24	3.1e-13	1	1
ENSPEMP00000007987	zf-CCCH	PF00642.24	3.8e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPEMT00000012122	-	3945	XM_006991461	ENSPEMP00000007975	1314 (aa)	XP_006991523	-
ENSPEMT00000012134	-	3867	XM_006991463	ENSPEMP00000007987	1254 (aa)	XP_006991525	UPI00042AEAA6
ENSPEMT00000012135	-	3540	XM_006991462	ENSPEMP00000007988	1179 (aa)	XP_006991524	UPI00042AA829

Gene Model

Click here to download ENSPEMG00000009762's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPEMG00000009762's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPEMG00000009762	Zc3h4	75	38.251	ENSPEMG00000000918	Zc3h6	66	49.533

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPEMG00000009762	Zc3h4	98	85.886	ENSG00000130749	ZC3H4	93	88.643	Homo_sapiens
ENSPEMG00000009762	Zc3h4	98	67.666	ENSACAG00000003986	ZC3H4	70	63.731	Anolis_carolinensis
ENSPEMG00000009762	Zc3h4	98	83.574	ENSANAG00000023963	ZC3H4	95	83.680	Aotus_nancymaae
ENSPEMG00000009762	Zc3h4	73	49.558	ENSAMXG00000009037	zc3h4	51	87.218	Astyanax_mexicanus
ENSPEMG00000009762	Zc3h4	98	84.548	ENSBTAG00000009286	ZC3H4	95	84.972	Bos_taurus
ENSPEMG00000009762	Zc3h4	98	82.681	ENSCJAG00000011601	ZC3H4	95	83.546	Callithrix_jacchus
ENSPEMG00000009762	Zc3h4	98	85.010	ENSCAFG00000004182	ZC3H4	95	83.691	Canis_familiaris
ENSPEMG00000009762	Zc3h4	98	81.496	ENSCHIG00000013956	ZC3H4	95	83.120	Capra_hircus
ENSPEMG00000009762	Zc3h4	89	88.000	ENSTSYG00000000926	ZC3H4	94	88.462	Carlito_syrichta
ENSPEMG00000009762	Zc3h4	98	85.457	ENSCCAG00000037597	ZC3H4	96	84.572	Cebus_capucinus
ENSPEMG00000009762	Zc3h4	98	84.042	ENSCATG00000039046	ZC3H4	95	84.868	Cercocebus_atys
ENSPEMG00000009762	Zc3h4	94	85.921	ENSCLAG00000001032	ZC3H4	100	85.696	Chinchilla_lanigera
ENSPEMG00000009762	Zc3h4	98	84.763	ENSCSAG00000002989	ZC3H4	98	85.588	Chlorocebus_sabaeus
ENSPEMG00000009762	Zc3h4	70	78.743	ENSCPBG00000001719	ZC3H4	77	80.902	Chrysemys_picta_bellii
ENSPEMG00000009762	Zc3h4	85	97.842	ENSCGRG00001016116	Zc3h4	100	97.842	Cricetulus_griseus_chok1gshd
ENSPEMG00000009762	Zc3h4	98	81.360	ENSDNOG00000003764	ZC3H4	95	83.680	Dasypus_novemcinctus
ENSPEMG00000009762	Zc3h4	100	86.324	ENSDORG00000002726	Zc3h4	100	87.924	Dipodomys_ordii
ENSPEMG00000009762	Zc3h4	81	94.505	ENSETEG00000005763	ZC3H4	74	94.565	Echinops_telfairi
ENSPEMG00000009762	Zc3h4	100	85.178	ENSECAG00000024342	ZC3H4	99	84.744	Equus_caballus
ENSPEMG00000009762	Zc3h4	81	82.143	ENSEEUG00000000519	ZC3H4	67	84.167	Erinaceus_europaeus
ENSPEMG00000009762	Zc3h4	100	83.473	ENSFCAG00000004835	ZC3H4	95	86.731	Felis_catus
ENSPEMG00000009762	Zc3h4	80	75.000	ENSGAGG00000019319	ZC3H4	69	79.839	Gopherus_agassizii
ENSPEMG00000009762	Zc3h4	98	85.966	ENSGGOG00000013071	ZC3H4	95	85.749	Gorilla_gorilla
ENSPEMG00000009762	Zc3h4	94	93.488	ENSSTOG00000016249	ZC3H4	99	90.930	Ictidomys_tridecemlineatus
ENSPEMG00000009762	Zc3h4	100	86.888	ENSJJAG00000019068	Zc3h4	100	88.547	Jaculus_jaculus
ENSPEMG00000009762	Zc3h4	98	82.174	ENSLAFG00000001586	ZC3H4	95	82.761	Loxodonta_africana
ENSPEMG00000009762	Zc3h4	98	85.886	ENSMFAG00000041518	ZC3H4	95	85.588	Macaca_fascicularis
ENSPEMG00000009762	Zc3h4	98	84.763	ENSMLEG00000007946	ZC3H4	99	85.588	Mandrillus_leucophaeus
ENSPEMG00000009762	Zc3h4	100	97.689	ENSMAUG00000000068	Zc3h4	100	97.689	Mesocricetus_auratus
ENSPEMG00000009762	Zc3h4	98	84.480	ENSMICG00000008786	ZC3H4	95	87.780	Microcebus_murinus
ENSPEMG00000009762	Zc3h4	91	79.337	ENSMODG00000008978	ZC3H4	65	88.482	Monodelphis_domestica
ENSPEMG00000009762	Zc3h4	100	97.450	ENSMUSG00000059273	Zc3h4	100	97.450	Mus_musculus
ENSPEMG00000009762	Zc3h4	100	96.653	MGP_PahariEiJ_G0021089	Zc3h4	100	96.653	Mus_pahari
ENSPEMG00000009762	Zc3h4	100	96.823	MGP_SPRETEiJ_G0030312	Zc3h4	100	96.823	Mus_spretus
ENSPEMG00000009762	Zc3h4	95	90.249	ENSMPUG00000005065	ZC3H4	95	81.055	Mustela_putorius_furo
ENSPEMG00000009762	Zc3h4	100	92.698	ENSNGAG00000020090	Zc3h4	100	93.492	Nannospalax_galili
ENSPEMG00000009762	Zc3h4	81	76.142	ENSMEUG00000009167	ZC3H4	73	83.632	Notamacropus_eugenii
ENSPEMG00000009762	Zc3h4	93	84.498	ENSOPRG00000014889	ZC3H4	85	83.359	Ochotona_princeps
ENSPEMG00000009762	Zc3h4	100	82.848	ENSODEG00000008320	ZC3H4	100	84.289	Octodon_degus
ENSPEMG00000009762	Zc3h4	80	64.126	ENSOANG00000001794	ZC3H4	53	69.912	Ornithorhynchus_anatinus
ENSPEMG00000009762	Zc3h4	96	90.148	ENSOCUG00000026069	ZC3H4	58	92.147	Oryctolagus_cuniculus
ENSPEMG00000009762	Zc3h4	98	84.720	ENSOGAG00000031123	ZC3H4	95	85.224	Otolemur_garnettii
ENSPEMG00000009762	Zc3h4	94	75.283	ENSOARG00000010932	ZC3H4	99	72.902	Ovis_aries
ENSPEMG00000009762	Zc3h4	98	81.505	ENSPPRG00000023272	ZC3H4	95	84.972	Panthera_pardus
ENSPEMG00000009762	Zc3h4	83	93.846	ENSPTIG00000014229	ZC3H4	93	93.846	Panthera_tigris_altaica
ENSPEMG00000009762	Zc3h4	98	85.886	ENSPTRG00000011201	ZC3H4	95	85.669	Pan_troglodytes
ENSPEMG00000009762	Zc3h4	98	86.127	ENSPANG00000021115	ZC3H4	95	85.829	Papio_anubis
ENSPEMG00000009762	Zc3h4	97	72.945	ENSPSIG00000002241	ZC3H4	68	79.726	Pelodiscus_sinensis
ENSPEMG00000009762	Zc3h4	92	85.406	ENSPPYG00000010167	ZC3H4	94	86.333	Pongo_abelii
ENSPEMG00000009762	Zc3h4	71	82.888	ENSPCAG00000014919	ZC3H4	93	80.000	Procavia_capensis
ENSPEMG00000009762	Zc3h4	98	84.240	ENSPCOG00000017169	ZC3H4	95	85.543	Propithecus_coquereli
ENSPEMG00000009762	Zc3h4	93	81.023	ENSPVAG00000005687	ZC3H4	89	82.850	Pteropus_vampyrus
ENSPEMG00000009762	Zc3h4	99	96.490	ENSRNOG00000015229	Zc3h4	99	96.490	Rattus_norvegicus
ENSPEMG00000009762	Zc3h4	92	85.695	ENSRBIG00000027984	ZC3H4	95	78.943	Rhinopithecus_bieti
ENSPEMG00000009762	Zc3h4	98	84.603	ENSRROG00000032920	ZC3H4	95	84.548	Rhinopithecus_roxellana
ENSPEMG00000009762	Zc3h4	92	89.078	ENSSBOG00000030914	ZC3H4	99	85.903	Saimiri_boliviensis_boliviensis
ENSPEMG00000009762	Zc3h4	84	85.443	ENSSARG00000014146	ZC3H4	82	87.407	Sorex_araneus
ENSPEMG00000009762	Zc3h4	84	80.080	ENSSSCG00000003110	ZC3H4	80	84.543	Sus_scrofa
ENSPEMG00000009762	Zc3h4	100	82.616	ENSVVUG00000000208	ZC3H4	98	84.628	Vulpes_vulpes