EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPEMG00000009785 (Gene tree)
Gene ID: 102903242
Gene Symbol: Tnrc6c
Alias: -
Full Name: trinucleotide repeat containing 6C
Gene Type: protein_coding
Species: Peromyscus_maniculatus_bairdii
Status: putative
Strand: Plus strand
Length: 81972 bases
Position: chrKI615771.1:718117-800088
Accession: 102903242
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPEMP00000008044	Ago_hook	PF10427.9	1.7e-23	1	1
ENSPEMP00000008051	Ago_hook	PF10427.9	1.7e-23	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPEMT00000012191	-	5700	-	ENSPEMP00000008044	1899 (aa)	-	-
ENSPEMT00000012198	-	4986	XM_006990254	ENSPEMP00000008051	1661 (aa)	XP_006990316	-

Gene Model

Click here to download ENSPEMG00000009785's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPEMG00000009785's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPEMG00000009785	Tnrc6c	98	34.017	ENSPEMG00000011403	Tnrc6b	96	34.776
ENSPEMG00000009785	Tnrc6c	99	39.862	ENSPEMG00000016318	Tnrc6a	97	39.244

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPEMG00000009785	Tnrc6c	100	88.398	ENSG00000078687	TNRC6C	100	90.872	Homo_sapiens
ENSPEMG00000009785	Tnrc6c	80	51.386	ENSAPOG00000019749	tnrc6c1	98	50.107	Acanthochromis_polyacanthus
ENSPEMG00000009785	Tnrc6c	100	83.429	ENSAMEG00000013756	TNRC6C	99	85.238	Ailuropoda_melanoleuca
ENSPEMG00000009785	Tnrc6c	88	50.515	ENSACIG00000008075	tnrc6c1	98	52.387	Amphilophus_citrinellus
ENSPEMG00000009785	Tnrc6c	75	61.935	ENSAOCG00000023968	tnrc6c1	99	49.345	Amphiprion_ocellaris
ENSPEMG00000009785	Tnrc6c	80	50.985	ENSAPEG00000009020	tnrc6c1	99	49.551	Amphiprion_percula
ENSPEMG00000009785	Tnrc6c	99	82.429	ENSAPLG00000005456	TNRC6C	100	82.171	Anas_platyrhynchos
ENSPEMG00000009785	Tnrc6c	99	82.066	ENSACAG00000016198	TNRC6C	98	82.500	Anolis_carolinensis
ENSPEMG00000009785	Tnrc6c	100	87.684	ENSANAG00000021554	TNRC6C	100	90.395	Aotus_nancymaae
ENSPEMG00000009785	Tnrc6c	100	45.149	ENSACLG00000000424	tnrc6c1	98	51.116	Astatotilapia_calliptera
ENSPEMG00000009785	Tnrc6c	99	84.847	ENSBTAG00000018658	TNRC6C	100	87.397	Bos_taurus
ENSPEMG00000009785	Tnrc6c	100	87.979	ENSCJAG00000019431	TNRC6C	100	90.395	Callithrix_jacchus
ENSPEMG00000009785	Tnrc6c	99	87.617	ENSCAFG00000005224	TNRC6C	99	87.617	Canis_familiaris
ENSPEMG00000009785	Tnrc6c	99	89.510	ENSCAFG00020006661	TNRC6C	100	88.915	Canis_lupus_dingo
ENSPEMG00000009785	Tnrc6c	99	86.042	ENSCHIG00000026004	TNRC6C	100	86.093	Capra_hircus
ENSPEMG00000009785	Tnrc6c	100	87.363	ENSTSYG00000005403	TNRC6C	100	89.729	Carlito_syrichta
ENSPEMG00000009785	Tnrc6c	98	85.524	ENSCAPG00000007307	TNRC6C	99	85.447	Cavia_aperea
ENSPEMG00000009785	Tnrc6c	99	89.681	ENSCPOG00000000467	TNRC6C	100	89.788	Cavia_porcellus
ENSPEMG00000009785	Tnrc6c	100	88.450	ENSCCAG00000030524	TNRC6C	100	90.866	Cebus_capucinus
ENSPEMG00000009785	Tnrc6c	100	88.450	ENSCATG00000033135	TNRC6C	100	90.866	Cercocebus_atys
ENSPEMG00000009785	Tnrc6c	99	90.972	ENSCLAG00000011139	TNRC6C	99	90.856	Chinchilla_lanigera
ENSPEMG00000009785	Tnrc6c	99	88.802	ENSCSAG00000005167	TNRC6C	99	88.802	Chlorocebus_sabaeus
ENSPEMG00000009785	Tnrc6c	72	89.134	ENSCHOG00000000088	TNRC6C	75	88.394	Choloepus_hoffmanni
ENSPEMG00000009785	Tnrc6c	100	83.510	ENSCPBG00000027960	TNRC6C	100	85.748	Chrysemys_picta_bellii
ENSPEMG00000009785	Tnrc6c	100	88.273	ENSCANG00000041771	TNRC6C	100	90.689	Colobus_angolensis_palliatus
ENSPEMG00000009785	Tnrc6c	99	95.365	ENSCGRG00001022686	Tnrc6c	100	95.325	Cricetulus_griseus_chok1gshd
ENSPEMG00000009785	Tnrc6c	99	95.365	ENSCGRG00000018041	Tnrc6c	100	95.325	Cricetulus_griseus_crigri
ENSPEMG00000009785	Tnrc6c	100	44.432	ENSCSEG00000012744	tnrc6c1	98	47.784	Cynoglossus_semilaevis
ENSPEMG00000009785	Tnrc6c	99	51.553	ENSDARG00000076847	tnrc6c1	99	52.771	Danio_rerio
ENSPEMG00000009785	Tnrc6c	100	84.226	ENSDNOG00000003247	TNRC6C	99	84.615	Dasypus_novemcinctus
ENSPEMG00000009785	Tnrc6c	100	86.001	ENSDORG00000004558	Tnrc6c	100	88.009	Dipodomys_ordii
ENSPEMG00000009785	Tnrc6c	89	77.547	ENSETEG00000005527	TNRC6C	90	81.088	Echinops_telfairi
ENSPEMG00000009785	Tnrc6c	100	86.844	ENSEASG00005004799	TNRC6C	100	89.853	Equus_asinus_asinus
ENSPEMG00000009785	Tnrc6c	99	89.291	ENSECAG00000012486	TNRC6C	99	89.345	Equus_caballus
ENSPEMG00000009785	Tnrc6c	96	90.018	ENSEEUG00000010008	TNRC6C	96	88.832	Erinaceus_europaeus
ENSPEMG00000009785	Tnrc6c	100	85.009	ENSFCAG00000028358	TNRC6C	100	87.654	Felis_catus
ENSPEMG00000009785	Tnrc6c	100	80.294	ENSFALG00000000848	TNRC6C	100	82.270	Ficedula_albicollis
ENSPEMG00000009785	Tnrc6c	100	88.659	ENSFDAG00000010368	TNRC6C	100	91.107	Fukomys_damarensis
ENSPEMG00000009785	Tnrc6c	96	46.119	ENSFHEG00000002936	tnrc6c1	99	47.211	Fundulus_heteroclitus
ENSPEMG00000009785	Tnrc6c	100	84.248	ENSGALG00000001725	TNRC6C	100	86.254	Gallus_gallus
ENSPEMG00000009785	Tnrc6c	100	47.537	ENSGAFG00000019019	tnrc6c1	100	49.392	Gambusia_affinis
ENSPEMG00000009785	Tnrc6c	80	50.535	ENSGACG00000012320	tnrc6c1	96	48.646	Gasterosteus_aculeatus
ENSPEMG00000009785	Tnrc6c	100	83.108	ENSGAGG00000022043	TNRC6C	99	84.845	Gopherus_agassizii
ENSPEMG00000009785	Tnrc6c	100	87.691	ENSGGOG00000011304	TNRC6C	100	90.047	Gorilla_gorilla
ENSPEMG00000009785	Tnrc6c	100	47.859	ENSHBUG00000010846	tnrc6c1	99	51.722	Haplochromis_burtoni
ENSPEMG00000009785	Tnrc6c	99	90.329	ENSHGLG00000004809	TNRC6C	99	90.223	Heterocephalus_glaber_female
ENSPEMG00000009785	Tnrc6c	99	90.861	ENSHGLG00100012597	TNRC6C	99	90.552	Heterocephalus_glaber_male
ENSPEMG00000009785	Tnrc6c	100	50.697	ENSIPUG00000000818	tnrc6c1	97	52.290	Ictalurus_punctatus
ENSPEMG00000009785	Tnrc6c	99	90.866	ENSSTOG00000009101	TNRC6C	100	90.435	Ictidomys_tridecemlineatus
ENSPEMG00000009785	Tnrc6c	99	91.219	ENSJJAG00000017055	Tnrc6c	99	91.006	Jaculus_jaculus
ENSPEMG00000009785	Tnrc6c	100	47.438	ENSKMAG00000021023	tnrc6c1	100	50.287	Kryptolebias_marmoratus
ENSPEMG00000009785	Tnrc6c	100	72.531	ENSLACG00000015283	TNRC6C	100	74.901	Latimeria_chalumnae
ENSPEMG00000009785	Tnrc6c	99	55.954	ENSLOCG00000013377	tnrc6c1	99	56.405	Lepisosteus_oculatus
ENSPEMG00000009785	Tnrc6c	99	89.384	ENSLAFG00000011122	TNRC6C	99	89.155	Loxodonta_africana
ENSPEMG00000009785	Tnrc6c	100	88.509	ENSMFAG00000043943	TNRC6C	100	90.925	Macaca_fascicularis
ENSPEMG00000009785	Tnrc6c	100	88.509	ENSMMUG00000011924	TNRC6C	100	90.925	Macaca_mulatta
ENSPEMG00000009785	Tnrc6c	100	88.509	ENSMNEG00000030405	TNRC6C	100	90.925	Macaca_nemestrina
ENSPEMG00000009785	Tnrc6c	100	88.509	ENSMLEG00000033436	TNRC6C	100	90.925	Mandrillus_leucophaeus
ENSPEMG00000009785	Tnrc6c	95	52.503	ENSMAMG00000023613	tnrc6c1	100	49.501	Mastacembelus_armatus
ENSPEMG00000009785	Tnrc6c	100	47.723	ENSMZEG00005010920	tnrc6c1	99	50.198	Maylandia_zebra
ENSPEMG00000009785	Tnrc6c	99	77.374	ENSMGAG00000003906	TNRC6C	100	77.063	Meleagris_gallopavo
ENSPEMG00000009785	Tnrc6c	100	93.846	ENSMAUG00000021618	Tnrc6c	100	96.331	Mesocricetus_auratus
ENSPEMG00000009785	Tnrc6c	99	89.688	ENSMICG00000003952	TNRC6C	100	91.397	Microcebus_murinus
ENSPEMG00000009785	Tnrc6c	100	97.316	ENSMOCG00000015879	Tnrc6c	100	97.316	Microtus_ochrogaster
ENSPEMG00000009785	Tnrc6c	78	52.118	ENSMMOG00000005203	tnrc6c1	100	50.225	Mola_mola
ENSPEMG00000009785	Tnrc6c	99	85.343	ENSMODG00000001785	TNRC6C	99	84.758	Monodelphis_domestica
ENSPEMG00000009785	Tnrc6c	100	96.316	MGP_CAROLIEiJ_G0017465	Tnrc6c	100	96.316	Mus_caroli
ENSPEMG00000009785	Tnrc6c	99	96.004	ENSMUSG00000025571	Tnrc6c	100	96.034	Mus_musculus
ENSPEMG00000009785	Tnrc6c	99	96.058	MGP_PahariEiJ_G0018593	Tnrc6c	100	96.034	Mus_pahari
ENSPEMG00000009785	Tnrc6c	99	96.058	MGP_SPRETEiJ_G0018309	Tnrc6c	100	96.092	Mus_spretus
ENSPEMG00000009785	Tnrc6c	99	84.659	ENSMPUG00000013348	TNRC6C	98	85.224	Mustela_putorius_furo
ENSPEMG00000009785	Tnrc6c	99	80.692	ENSMLUG00000014431	TNRC6C	98	80.940	Myotis_lucifugus
ENSPEMG00000009785	Tnrc6c	99	94.086	ENSNGAG00000012203	Tnrc6c	99	93.926	Nannospalax_galili
ENSPEMG00000009785	Tnrc6c	100	45.697	ENSNBRG00000005344	tnrc6c1	98	51.875	Neolamprologus_brichardi
ENSPEMG00000009785	Tnrc6c	98	86.984	ENSNLEG00000000047	TNRC6C	99	86.827	Nomascus_leucogenys
ENSPEMG00000009785	Tnrc6c	97	76.946	ENSMEUG00000005104	TNRC6C	100	78.910	Notamacropus_eugenii
ENSPEMG00000009785	Tnrc6c	100	88.955	ENSODEG00000012499	TNRC6C	100	91.908	Octodon_degus
ENSPEMG00000009785	Tnrc6c	100	47.560	ENSONIG00000002210	tnrc6c1	99	51.415	Oreochromis_niloticus
ENSPEMG00000009785	Tnrc6c	99	62.093	ENSOANG00000009758	-	100	61.925	Ornithorhynchus_anatinus
ENSPEMG00000009785	Tnrc6c	86	79.211	ENSOCUG00000006122	TNRC6C	95	76.310	Oryctolagus_cuniculus
ENSPEMG00000009785	Tnrc6c	93	46.903	ENSORLG00000009837	tnrc6c1	100	68.030	Oryzias_latipes
ENSPEMG00000009785	Tnrc6c	93	45.729	ENSORLG00020016510	tnrc6c1	97	49.169	Oryzias_latipes_hni
ENSPEMG00000009785	Tnrc6c	73	44.019	ENSORLG00015000171	tnrc6c1	97	42.606	Oryzias_latipes_hsok
ENSPEMG00000009785	Tnrc6c	93	47.672	ENSOMEG00000000357	tnrc6c1	99	48.181	Oryzias_melastigma
ENSPEMG00000009785	Tnrc6c	100	86.209	ENSOGAG00000007197	TNRC6C	100	88.632	Otolemur_garnettii
ENSPEMG00000009785	Tnrc6c	95	82.050	ENSOARG00000006041	TNRC6C	97	82.350	Ovis_aries
ENSPEMG00000009785	Tnrc6c	100	88.332	ENSPPAG00000027160	TNRC6C	100	90.748	Pan_paniscus
ENSPEMG00000009785	Tnrc6c	100	85.185	ENSPPRG00000018881	TNRC6C	100	87.831	Panthera_pardus
ENSPEMG00000009785	Tnrc6c	90	84.716	ENSPTIG00000008791	TNRC6C	89	92.593	Panthera_tigris_altaica
ENSPEMG00000009785	Tnrc6c	100	88.332	ENSPTRG00000009699	TNRC6C	100	90.748	Pan_troglodytes
ENSPEMG00000009785	Tnrc6c	100	88.666	ENSPANG00000019994	TNRC6C	100	91.086	Papio_anubis
ENSPEMG00000009785	Tnrc6c	58	57.399	ENSPKIG00000005428	tnrc6c1	100	50.139	Paramormyrops_kingsleyae
ENSPEMG00000009785	Tnrc6c	100	81.567	ENSPSIG00000018069	TNRC6C	100	83.581	Pelodiscus_sinensis
ENSPEMG00000009785	Tnrc6c	64	49.554	ENSPMGG00000022911	tnrc6c1	97	63.265	Periophthalmus_magnuspinnatus
ENSPEMG00000009785	Tnrc6c	58	83.934	ENSPCIG00000017421	-	99	83.625	Phascolarctos_cinereus
ENSPEMG00000009785	Tnrc6c	100	47.566	ENSPFOG00000012560	tnrc6c1	97	54.564	Poecilia_formosa
ENSPEMG00000009785	Tnrc6c	100	47.622	ENSPLAG00000021055	tnrc6c1	100	49.531	Poecilia_latipinna
ENSPEMG00000009785	Tnrc6c	99	88.918	ENSPPYG00000008679	TNRC6C	98	88.906	Pongo_abelii
ENSPEMG00000009785	Tnrc6c	85	92.417	ENSPCAG00000012510	TNRC6C	94	92.417	Procavia_capensis
ENSPEMG00000009785	Tnrc6c	100	88.568	ENSPCOG00000021451	TNRC6C	100	91.868	Propithecus_coquereli
ENSPEMG00000009785	Tnrc6c	97	88.983	ENSPVAG00000002008	TNRC6C	95	88.983	Pteropus_vampyrus
ENSPEMG00000009785	Tnrc6c	100	47.629	ENSPNYG00000014477	tnrc6c1	99	51.480	Pundamilia_nyererei
ENSPEMG00000009785	Tnrc6c	100	92.494	ENSRNOG00000022395	Tnrc6c	100	95.095	Rattus_norvegicus
ENSPEMG00000009785	Tnrc6c	100	88.391	ENSRBIG00000027777	TNRC6C	100	90.807	Rhinopithecus_bieti
ENSPEMG00000009785	Tnrc6c	100	88.450	ENSRROG00000042912	TNRC6C	100	90.866	Rhinopithecus_roxellana
ENSPEMG00000009785	Tnrc6c	99	88.594	ENSSBOG00000023981	TNRC6C	100	88.344	Saimiri_boliviensis_boliviensis
ENSPEMG00000009785	Tnrc6c	52	80.687	ENSSHAG00000018330	-	100	84.764	Sarcophilus_harrisii
ENSPEMG00000009785	Tnrc6c	68	51.541	ENSSFOG00015004735	-	99	60.313	Scleropages_formosus
ENSPEMG00000009785	Tnrc6c	74	56.422	ENSSFOG00015006475	tnrc6c1	98	51.028	Scleropages_formosus
ENSPEMG00000009785	Tnrc6c	100	46.086	ENSSMAG00000012761	tnrc6c1	99	50.543	Scophthalmus_maximus
ENSPEMG00000009785	Tnrc6c	94	48.727	ENSSDUG00000002366	tnrc6c1	98	50.703	Seriola_dumerili
ENSPEMG00000009785	Tnrc6c	94	47.443	ENSSLDG00000025613	tnrc6c1	100	49.862	Seriola_lalandi_dorsalis
ENSPEMG00000009785	Tnrc6c	93	88.362	ENSSARG00000006816	TNRC6C	91	88.106	Sorex_araneus
ENSPEMG00000009785	Tnrc6c	82	80.208	ENSSPUG00000007341	TNRC6C	98	82.569	Sphenodon_punctatus
ENSPEMG00000009785	Tnrc6c	78	50.494	ENSSPAG00000014977	tnrc6c1	98	48.783	Stegastes_partitus
ENSPEMG00000009785	Tnrc6c	100	80.933	ENSSSCG00000034373	TNRC6C	100	84.189	Sus_scrofa
ENSPEMG00000009785	Tnrc6c	100	84.226	ENSTGUG00000007733	TNRC6C	100	86.049	Taeniopygia_guttata
ENSPEMG00000009785	Tnrc6c	78	50.385	ENSTRUG00000011685	tnrc6c1	99	47.746	Takifugu_rubripes
ENSPEMG00000009785	Tnrc6c	92	52.255	ENSTNIG00000005273	tnrc6c1	100	60.330	Tetraodon_nigroviridis
ENSPEMG00000009785	Tnrc6c	64	89.062	ENSTBEG00000005046	TNRC6C	99	81.112	Tupaia_belangeri
ENSPEMG00000009785	Tnrc6c	100	86.286	ENSTTRG00000010828	TNRC6C	99	88.794	Tursiops_truncatus
ENSPEMG00000009785	Tnrc6c	99	87.553	ENSUMAG00000013614	TNRC6C	99	87.766	Ursus_maritimus
ENSPEMG00000009785	Tnrc6c	53	78.894	ENSVPAG00000006765	-	99	79.115	Vicugna_pacos
ENSPEMG00000009785	Tnrc6c	100	87.441	ENSVVUG00000015268	TNRC6C	100	90.212	Vulpes_vulpes
ENSPEMG00000009785	Tnrc6c	100	71.612	ENSXETG00000019470	tnrc6c	100	73.552	Xenopus_tropicalis
ENSPEMG00000009785	Tnrc6c	100	48.402	ENSXMAG00000025971	tnrc6c1	99	50.288	Xiphophorus_maculatus