EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPEMG00000009969 (Gene tree)
Gene ID: 102915381
Gene Symbol: Prdm12
Alias: -
Full Name: PR/SET domain 12
Gene Type: protein_coding
Species: Peromyscus_maniculatus_bairdii
Status: putative
Strand: Plus strand
Length: 15833 bases
Position: chrKI615514.1:3219394-3235226
Accession: 102915381
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPEMP00000008273	zf-C2H2	PF00096.26	9.7e-13	1	2
ENSPEMP00000008273	zf-C2H2	PF00096.26	9.7e-13	2	2
ENSPEMP00000008264	zf-C2H2	PF00096.26	1.4e-12	1	2
ENSPEMP00000008264	zf-C2H2	PF00096.26	1.4e-12	2	2
ENSPEMP00000008264	zf-met	PF12874.7	6.1e-08	1	1
ENSPEMP00000008273	zf-met	PF12874.7	8.8e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPEMT00000012418	-	1098	-	ENSPEMP00000008264	365 (aa)	-	-
ENSPEMT00000012427	-	1092	XM_006983503	ENSPEMP00000008273	364 (aa)	XP_006983565	-

Gene Model

Click here to download ENSPEMG00000009969's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPEMG00000009969's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPEMG00000009969	Prdm12	91	98.193	ENSG00000130711	PRDM12	99	91.758	Homo_sapiens
ENSPEMG00000009969	Prdm12	91	79.487	ENSAPOG00000016051	prdm12b	96	76.190	Acanthochromis_polyacanthus
ENSPEMG00000009969	Prdm12	92	66.000	ENSAPOG00000018234	-	95	66.286	Acanthochromis_polyacanthus
ENSPEMG00000009969	Prdm12	89	94.427	ENSAMEG00000016234	PRDM12	99	94.427	Ailuropoda_melanoleuca
ENSPEMG00000009969	Prdm12	96	76.676	ENSACIG00000005193	-	97	76.408	Amphilophus_citrinellus
ENSPEMG00000009969	Prdm12	91	79.827	ENSACIG00000019578	prdm12b	97	77.596	Amphilophus_citrinellus
ENSPEMG00000009969	Prdm12	91	80.692	ENSAOCG00000015040	prdm12b	96	77.540	Amphiprion_ocellaris
ENSPEMG00000009969	Prdm12	91	81.395	ENSAPEG00000015092	prdm12b	96	78.167	Amphiprion_percula
ENSPEMG00000009969	Prdm12	89	79.464	ENSAPEG00000022849	-	95	75.204	Amphiprion_percula
ENSPEMG00000009969	Prdm12	89	82.371	ENSATEG00000014595	-	96	82.371	Anabas_testudineus
ENSPEMG00000009969	Prdm12	95	94.556	ENSANAG00000020616	PRDM12	98	98.494	Aotus_nancymaae
ENSPEMG00000009969	Prdm12	91	82.635	ENSACLG00000011876	prdm12b	92	82.635	Astatotilapia_calliptera
ENSPEMG00000009969	Prdm12	91	80.516	ENSACLG00000007631	-	89	80.571	Astatotilapia_calliptera
ENSPEMG00000009969	Prdm12	90	88.323	ENSAMXG00000033665	prdm12b	96	83.425	Astyanax_mexicanus
ENSPEMG00000009969	Prdm12	90	84.356	ENSAMXG00000008540	PRDM12	91	83.636	Astyanax_mexicanus
ENSPEMG00000009969	Prdm12	91	99.398	ENSBTAG00000023797	PRDM12	96	96.254	Bos_taurus
ENSPEMG00000009969	Prdm12	91	98.494	ENSCJAG00000020540	PRDM12	96	95.389	Callithrix_jacchus
ENSPEMG00000009969	Prdm12	79	97.924	ENSCAFG00000023076	PRDM12	94	94.408	Canis_familiaris
ENSPEMG00000009969	Prdm12	91	99.096	ENSCAFG00020024046	PRDM12	95	95.965	Canis_lupus_dingo
ENSPEMG00000009969	Prdm12	91	99.096	ENSCHIG00000025005	PRDM12	92	99.096	Capra_hircus
ENSPEMG00000009969	Prdm12	91	93.994	ENSCPOG00000005901	PRDM12	95	98.403	Cavia_porcellus
ENSPEMG00000009969	Prdm12	91	98.494	ENSCCAG00000037485	PRDM12	95	95.389	Cebus_capucinus
ENSPEMG00000009969	Prdm12	91	98.494	ENSCATG00000020327	PRDM12	95	95.389	Cercocebus_atys
ENSPEMG00000009969	Prdm12	91	98.489	ENSCLAG00000005499	PRDM12	91	98.489	Chinchilla_lanigera
ENSPEMG00000009969	Prdm12	91	98.494	ENSCSAG00000014756	PRDM12	95	95.389	Chlorocebus_sabaeus
ENSPEMG00000009969	Prdm12	96	89.205	ENSCPBG00000022628	PRDM12	94	92.771	Chrysemys_picta_bellii
ENSPEMG00000009969	Prdm12	91	100.000	ENSCGRG00001015005	Prdm12	91	100.000	Cricetulus_griseus_chok1gshd
ENSPEMG00000009969	Prdm12	90	77.778	ENSCVAG00000000944	-	97	74.603	Cyprinodon_variegatus
ENSPEMG00000009969	Prdm12	90	82.840	ENSCVAG00000017166	prdm12b	92	82.405	Cyprinodon_variegatus
ENSPEMG00000009969	Prdm12	97	81.818	ENSDARG00000007430	prdm12b	98	81.818	Danio_rerio
ENSPEMG00000009969	Prdm12	94	96.221	ENSDNOG00000042302	PRDM12	95	96.221	Dasypus_novemcinctus
ENSPEMG00000009969	Prdm12	89	62.393	ENSEBUG00000016780	prdm12b	78	63.818	Eptatretus_burgeri
ENSPEMG00000009969	Prdm12	95	95.415	ENSEASG00005008472	PRDM12	96	95.977	Equus_asinus_asinus
ENSPEMG00000009969	Prdm12	95	95.129	ENSECAG00000005933	PRDM12	96	95.690	Equus_caballus
ENSPEMG00000009969	Prdm12	89	83.333	ENSELUG00000013674	PRDM12	89	83.333	Esox_lucius
ENSPEMG00000009969	Prdm12	95	83.286	ENSELUG00000009905	prdm12b	94	83.286	Esox_lucius
ENSPEMG00000009969	Prdm12	91	99.096	ENSFCAG00000043086	PRDM12	95	95.965	Felis_catus
ENSPEMG00000009969	Prdm12	96	89.205	ENSFALG00000001445	PRDM12	84	93.072	Ficedula_albicollis
ENSPEMG00000009969	Prdm12	90	79.300	ENSFHEG00000007746	-	94	76.796	Fundulus_heteroclitus
ENSPEMG00000009969	Prdm12	89	82.493	ENSFHEG00000003944	prdm12b	96	78.320	Fundulus_heteroclitus
ENSPEMG00000009969	Prdm12	89	83.891	ENSGMOG00000011797	prdm12b	99	80.286	Gadus_morhua
ENSPEMG00000009969	Prdm12	96	89.205	ENSGALG00000003895	PRDM12	94	93.072	Gallus_gallus
ENSPEMG00000009969	Prdm12	91	82.301	ENSGAFG00000010827	prdm12b	96	78.415	Gambusia_affinis
ENSPEMG00000009969	Prdm12	90	83.728	ENSGACG00000016713	prdm12b	91	83.728	Gasterosteus_aculeatus
ENSPEMG00000009969	Prdm12	96	89.489	ENSGAGG00000014083	PRDM12	94	93.072	Gopherus_agassizii
ENSPEMG00000009969	Prdm12	91	97.892	ENSGGOG00000010568	PRDM12	91	97.892	Gorilla_gorilla
ENSPEMG00000009969	Prdm12	91	80.870	ENSHBUG00000022878	prdm12b	91	82.164	Haplochromis_burtoni
ENSPEMG00000009969	Prdm12	91	80.516	ENSHBUG00000022537	-	82	80.571	Haplochromis_burtoni
ENSPEMG00000009969	Prdm12	91	98.489	ENSHGLG00000013939	PRDM12	99	92.798	Heterocephalus_glaber_female
ENSPEMG00000009969	Prdm12	95	74.859	ENSHCOG00000021167	-	97	74.859	Hippocampus_comes
ENSPEMG00000009969	Prdm12	89	80.994	ENSHCOG00000003663	prdm12b	93	77.260	Hippocampus_comes
ENSPEMG00000009969	Prdm12	90	87.126	ENSIPUG00000017053	prdm12b	91	87.126	Ictalurus_punctatus
ENSPEMG00000009969	Prdm12	89	82.012	ENSIPUG00000019544	PRDM12	90	82.012	Ictalurus_punctatus
ENSPEMG00000009969	Prdm12	97	94.901	ENSSTOG00000005986	PRDM12	87	99.699	Ictidomys_tridecemlineatus
ENSPEMG00000009969	Prdm12	91	99.394	ENSJJAG00000005424	Prdm12	100	99.394	Jaculus_jaculus
ENSPEMG00000009969	Prdm12	88	81.651	ENSKMAG00000021205	-	92	81.651	Kryptolebias_marmoratus
ENSPEMG00000009969	Prdm12	90	78.212	ENSKMAG00000016921	prdm12b	93	75.393	Kryptolebias_marmoratus
ENSPEMG00000009969	Prdm12	96	76.902	ENSLBEG00000007776	-	97	77.174	Labrus_bergylta
ENSPEMG00000009969	Prdm12	89	83.832	ENSLBEG00000017769	prdm12b	95	78.533	Labrus_bergylta
ENSPEMG00000009969	Prdm12	96	86.895	ENSLACG00000017560	PRDM12	97	86.895	Latimeria_chalumnae
ENSPEMG00000009969	Prdm12	89	88.037	ENSLOCG00000005429	prdm12b	95	84.046	Lepisosteus_oculatus
ENSPEMG00000009969	Prdm12	91	97.337	ENSLAFG00000006979	PRDM12	95	93.838	Loxodonta_africana
ENSPEMG00000009969	Prdm12	91	98.494	ENSMFAG00000040322	PRDM12	94	95.389	Macaca_fascicularis
ENSPEMG00000009969	Prdm12	91	98.494	ENSMNEG00000037234	PRDM12	95	95.389	Macaca_nemestrina
ENSPEMG00000009969	Prdm12	89	81.250	ENSMAMG00000018988	-	88	80.233	Mastacembelus_armatus
ENSPEMG00000009969	Prdm12	90	82.111	ENSMAMG00000013212	prdm12b	97	79.006	Mastacembelus_armatus
ENSPEMG00000009969	Prdm12	91	80.516	ENSMZEG00005000415	PRDM12	88	80.571	Maylandia_zebra
ENSPEMG00000009969	Prdm12	96	89.205	ENSMGAG00000005438	PRDM12	94	93.072	Meleagris_gallopavo
ENSPEMG00000009969	Prdm12	95	95.702	ENSMAUG00000013040	Prdm12	91	99.699	Mesocricetus_auratus
ENSPEMG00000009969	Prdm12	91	99.096	ENSMICG00000015480	PRDM12	99	92.521	Microcebus_murinus
ENSPEMG00000009969	Prdm12	98	93.872	ENSMOCG00000021026	Prdm12	91	99.699	Microtus_ochrogaster
ENSPEMG00000009969	Prdm12	96	90.909	ENSMODG00000012108	PRDM12	94	95.181	Monodelphis_domestica
ENSPEMG00000009969	Prdm12	93	68.857	ENSMALG00000021901	prdm12b	93	68.857	Monopterus_albus
ENSPEMG00000009969	Prdm12	91	99.699	MGP_CAROLIEiJ_G0023414	Prdm12	95	96.542	Mus_caroli
ENSPEMG00000009969	Prdm12	91	99.699	ENSMUSG00000079466	Prdm12	95	96.542	Mus_musculus
ENSPEMG00000009969	Prdm12	91	99.699	MGP_PahariEiJ_G0024871	Prdm12	95	96.542	Mus_pahari
ENSPEMG00000009969	Prdm12	91	99.699	MGP_SPRETEiJ_G0024331	Prdm12	95	96.542	Mus_spretus
ENSPEMG00000009969	Prdm12	91	98.788	ENSNGAG00000018480	Prdm12	95	98.198	Nannospalax_galili
ENSPEMG00000009969	Prdm12	91	80.172	ENSNBRG00000006727	prdm12b	91	81.449	Neolamprologus_brichardi
ENSPEMG00000009969	Prdm12	91	76.608	ENSNBRG00000024312	-	95	76.765	Neolamprologus_brichardi
ENSPEMG00000009969	Prdm12	96	80.627	ENSMEUG00000003828	PRDM12	94	84.036	Notamacropus_eugenii
ENSPEMG00000009969	Prdm12	91	97.879	ENSOPRG00000008680	PRDM12	100	97.879	Ochotona_princeps
ENSPEMG00000009969	Prdm12	96	94.886	ENSODEG00000016282	PRDM12	62	99.094	Octodon_degus
ENSPEMG00000009969	Prdm12	54	96.410	ENSOANG00000001043	PRDM12	90	96.410	Ornithorhynchus_anatinus
ENSPEMG00000009969	Prdm12	84	93.770	ENSOCUG00000008241	PRDM12	98	93.770	Oryctolagus_cuniculus
ENSPEMG00000009969	Prdm12	94	79.224	ENSORLG00000007114	prdm12b	92	81.556	Oryzias_latipes
ENSPEMG00000009969	Prdm12	91	78.448	ENSORLG00000017558	-	94	76.294	Oryzias_latipes
ENSPEMG00000009969	Prdm12	91	78.223	ENSORLG00020013167	-	89	78.857	Oryzias_latipes_hni
ENSPEMG00000009969	Prdm12	92	80.627	ENSORLG00020019565	prdm12b	95	78.904	Oryzias_latipes_hni
ENSPEMG00000009969	Prdm12	92	80.342	ENSORLG00015007621	prdm12b	95	78.788	Oryzias_latipes_hsok
ENSPEMG00000009969	Prdm12	91	78.448	ENSORLG00015003435	-	94	76.294	Oryzias_latipes_hsok
ENSPEMG00000009969	Prdm12	93	79.387	ENSOMEG00000004134	prdm12b	95	78.415	Oryzias_melastigma
ENSPEMG00000009969	Prdm12	93	77.072	ENSOMEG00000007762	-	96	77.348	Oryzias_melastigma
ENSPEMG00000009969	Prdm12	91	99.096	ENSOGAG00000007557	PRDM12	99	99.096	Otolemur_garnettii
ENSPEMG00000009969	Prdm12	79	97.561	ENSPPAG00000031506	-	99	95.904	Pan_paniscus
ENSPEMG00000009969	Prdm12	95	86.819	ENSPPRG00000023024	PRDM12	89	86.819	Panthera_pardus
ENSPEMG00000009969	Prdm12	91	98.193	ENSPTRG00000021475	PRDM12	91	98.193	Pan_troglodytes
ENSPEMG00000009969	Prdm12	91	98.193	ENSPTRG00000043324	-	91	98.193	Pan_troglodytes
ENSPEMG00000009969	Prdm12	91	98.494	ENSPANG00000025967	PRDM12	95	95.389	Papio_anubis
ENSPEMG00000009969	Prdm12	90	86.136	ENSPKIG00000007228	prdm12b	98	81.868	Paramormyrops_kingsleyae
ENSPEMG00000009969	Prdm12	93	78.063	ENSPKIG00000004305	PRDM12	99	78.063	Paramormyrops_kingsleyae
ENSPEMG00000009969	Prdm12	96	89.205	ENSPSIG00000006739	PRDM12	94	92.771	Pelodiscus_sinensis
ENSPEMG00000009969	Prdm12	93	78.736	ENSPMGG00000002356	-	97	75.067	Periophthalmus_magnuspinnatus
ENSPEMG00000009969	Prdm12	90	83.432	ENSPMGG00000008867	prdm12b	92	83.626	Periophthalmus_magnuspinnatus
ENSPEMG00000009969	Prdm12	96	91.453	ENSPCIG00000024119	PRDM12	94	95.482	Phascolarctos_cinereus
ENSPEMG00000009969	Prdm12	91	81.924	ENSPFOG00000019841	prdm12b	93	81.924	Poecilia_formosa
ENSPEMG00000009969	Prdm12	90	83.036	ENSPLAG00000016626	prdm12b	96	78.689	Poecilia_latipinna
ENSPEMG00000009969	Prdm12	88	82.067	ENSPMEG00000016698	prdm12b	96	78.371	Poecilia_mexicana
ENSPEMG00000009969	Prdm12	90	76.331	ENSPREG00000003211	-	93	76.331	Poecilia_reticulata
ENSPEMG00000009969	Prdm12	90	82.891	ENSPREG00000015073	prdm12b	96	79.019	Poecilia_reticulata
ENSPEMG00000009969	Prdm12	95	94.798	ENSPPYG00000019694	PRDM12	99	94.798	Pongo_abelii
ENSPEMG00000009969	Prdm12	98	93.855	ENSPCOG00000022255	PRDM12	91	99.096	Propithecus_coquereli
ENSPEMG00000009969	Prdm12	91	98.795	ENSPVAG00000001511	PRDM12	99	92.033	Pteropus_vampyrus
ENSPEMG00000009969	Prdm12	91	80.115	ENSPNYG00000009607	prdm12b	91	81.395	Pundamilia_nyererei
ENSPEMG00000009969	Prdm12	91	80.516	ENSPNYG00000013589	-	88	80.571	Pundamilia_nyererei
ENSPEMG00000009969	Prdm12	89	80.909	ENSPNAG00000013396	PRDM12	93	76.124	Pygocentrus_nattereri
ENSPEMG00000009969	Prdm12	90	88.922	ENSPNAG00000024532	prdm12b	91	88.922	Pygocentrus_nattereri
ENSPEMG00000009969	Prdm12	91	99.699	ENSRNOG00000009218	Prdm12	95	96.542	Rattus_norvegicus
ENSPEMG00000009969	Prdm12	87	98.423	ENSRBIG00000042712	PRDM12	100	89.617	Rhinopithecus_bieti
ENSPEMG00000009969	Prdm12	88	98.442	ENSRROG00000043554	PRDM12	100	98.442	Rhinopithecus_roxellana
ENSPEMG00000009969	Prdm12	96	91.193	ENSSHAG00000015972	PRDM12	94	95.195	Sarcophilus_harrisii
ENSPEMG00000009969	Prdm12	90	80.057	ENSSMAG00000003754	prdm12b	94	78.202	Scophthalmus_maximus
ENSPEMG00000009969	Prdm12	90	82.883	ENSSDUG00000019071	-	92	83.939	Seriola_dumerili
ENSPEMG00000009969	Prdm12	97	76.923	ENSSDUG00000023498	prdm12b	95	78.415	Seriola_dumerili
ENSPEMG00000009969	Prdm12	97	77.540	ENSSLDG00000009557	prdm12b	95	79.339	Seriola_lalandi_dorsalis
ENSPEMG00000009969	Prdm12	89	84.049	ENSSLDG00000013562	-	93	84.356	Seriola_lalandi_dorsalis
ENSPEMG00000009969	Prdm12	96	88.920	ENSSPUG00000013424	PRDM12	94	92.470	Sphenodon_punctatus
ENSPEMG00000009969	Prdm12	91	80.342	ENSSPAG00000018824	prdm12b	96	77.628	Stegastes_partitus
ENSPEMG00000009969	Prdm12	89	72.566	ENSSPAG00000022420	-	95	70.986	Stegastes_partitus
ENSPEMG00000009969	Prdm12	91	99.096	ENSSSCG00000005703	PRDM12	95	95.965	Sus_scrofa
ENSPEMG00000009969	Prdm12	91	82.840	ENSTRUG00000018659	prdm12b	90	84.036	Takifugu_rubripes
ENSPEMG00000009969	Prdm12	89	81.024	ENSTRUG00000013239	-	93	81.325	Takifugu_rubripes
ENSPEMG00000009969	Prdm12	89	81.155	ENSTNIG00000005859	-	92	81.155	Tetraodon_nigroviridis
ENSPEMG00000009969	Prdm12	91	83.481	ENSTNIG00000009020	prdm12b	94	81.921	Tetraodon_nigroviridis
ENSPEMG00000009969	Prdm12	94	96.232	ENSUAMG00000009653	PRDM12	96	96.232	Ursus_americanus
ENSPEMG00000009969	Prdm12	91	99.096	ENSVVUG00000027662	PRDM12	79	99.096	Vulpes_vulpes
ENSPEMG00000009969	Prdm12	90	83.036	ENSXCOG00000002836	prdm12b	96	78.846	Xiphophorus_couchianus
ENSPEMG00000009969	Prdm12	90	80.294	ENSXMAG00000028012	-	95	76.567	Xiphophorus_maculatus
ENSPEMG00000009969	Prdm12	90	82.544	ENSXMAG00000005537	prdm12b	96	78.415	Xiphophorus_maculatus