EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPEMG00000010009 (Gene tree)
Gene ID: 102913893
Gene Symbol: Pum1
Alias: -
Full Name: pumilio RNA binding family member 1
Gene Type: protein_coding
Species: Peromyscus_maniculatus_bairdii
Status: putative
Strand: Plus strand
Length: 120712 bases
Position: chrKI615381.1:706420-827131
Accession: 102913893
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPEMP00000008323	PUF	PF00806.19	1.7e-70	1	8
ENSPEMP00000008323	PUF	PF00806.19	1.7e-70	2	8
ENSPEMP00000008323	PUF	PF00806.19	1.7e-70	3	8
ENSPEMP00000008323	PUF	PF00806.19	1.7e-70	4	8
ENSPEMP00000008323	PUF	PF00806.19	1.7e-70	5	8
ENSPEMP00000008323	PUF	PF00806.19	1.7e-70	6	8
ENSPEMP00000008323	PUF	PF00806.19	1.7e-70	7	8
ENSPEMP00000008323	PUF	PF00806.19	1.7e-70	8	8
ENSPEMP00000008321	PUF	PF00806.19	1.5e-69	1	8
ENSPEMP00000008321	PUF	PF00806.19	1.5e-69	2	8
ENSPEMP00000008321	PUF	PF00806.19	1.5e-69	3	8
ENSPEMP00000008321	PUF	PF00806.19	1.5e-69	4	8
ENSPEMP00000008321	PUF	PF00806.19	1.5e-69	5	8
ENSPEMP00000008321	PUF	PF00806.19	1.5e-69	6	8
ENSPEMP00000008321	PUF	PF00806.19	1.5e-69	7	8
ENSPEMP00000008321	PUF	PF00806.19	1.5e-69	8	8
ENSPEMP00000008319	PUF	PF00806.19	3.2e-69	1	8
ENSPEMP00000008319	PUF	PF00806.19	3.2e-69	2	8
ENSPEMP00000008319	PUF	PF00806.19	3.2e-69	3	8
ENSPEMP00000008319	PUF	PF00806.19	3.2e-69	4	8
ENSPEMP00000008319	PUF	PF00806.19	3.2e-69	5	8
ENSPEMP00000008319	PUF	PF00806.19	3.2e-69	6	8
ENSPEMP00000008319	PUF	PF00806.19	3.2e-69	7	8
ENSPEMP00000008319	PUF	PF00806.19	3.2e-69	8	8

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPEMT00000012477	-	4536	XM_015994439	ENSPEMP00000008323	942 (aa)	XP_015849925	UPI000359564E
ENSPEMT00000012475	-	4980	XM_006975562	ENSPEMP00000008321	1090 (aa)	XP_006975624	UPI0003596691
ENSPEMT00000012473	-	5271	XM_006975556	ENSPEMP00000008319	1187 (aa)	XP_006975618	UPI00042AF2BE

Gene Model

Click here to download ENSPEMG00000010009's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPEMG00000010009's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPEMG00000010009	Pum1	89	76.580	ENSPEMG00000008357	Pum2	100	76.766

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPEMG00000010009	Pum1	100	99.306	ENSG00000134644	PUM1	100	100.000	Homo_sapiens
ENSPEMG00000010009	Pum1	100	83.292	ENSAPOG00000021632	pum1	100	90.843	Acanthochromis_polyacanthus
ENSPEMG00000010009	Pum1	100	99.306	ENSAMEG00000017656	PUM1	97	98.908	Ailuropoda_melanoleuca
ENSPEMG00000010009	Pum1	100	83.292	ENSACIG00000021013	pum1	100	76.388	Amphilophus_citrinellus
ENSPEMG00000010009	Pum1	100	83.292	ENSAOCG00000003944	pum1	100	77.413	Amphiprion_ocellaris
ENSPEMG00000010009	Pum1	100	83.292	ENSAPEG00000014550	pum1	100	77.413	Amphiprion_percula
ENSPEMG00000010009	Pum1	100	83.292	ENSATEG00000016004	pum1	100	90.843	Anabas_testudineus
ENSPEMG00000010009	Pum1	100	97.264	ENSAPLG00000009351	PUM1	100	97.140	Anas_platyrhynchos
ENSPEMG00000010009	Pum1	100	96.135	ENSACAG00000000682	PUM1	98	95.202	Anolis_carolinensis
ENSPEMG00000010009	Pum1	100	99.306	ENSANAG00000027865	PUM1	100	99.306	Aotus_nancymaae
ENSPEMG00000010009	Pum1	90	78.148	ENSACLG00000019354	pum1	100	78.796	Astatotilapia_calliptera
ENSPEMG00000010009	Pum1	100	83.333	ENSAMXG00000020607	pum1	96	78.745	Astyanax_mexicanus
ENSPEMG00000010009	Pum1	100	99.306	ENSBTAG00000018979	PUM1	100	99.306	Bos_taurus
ENSPEMG00000010009	Pum1	100	99.306	ENSCJAG00000006035	PUM1	100	99.306	Callithrix_jacchus
ENSPEMG00000010009	Pum1	100	99.306	ENSCAFG00000011205	PUM1	100	96.720	Canis_familiaris
ENSPEMG00000010009	Pum1	92	96.906	ENSCAFG00020024616	PUM1	99	98.292	Canis_lupus_dingo
ENSPEMG00000010009	Pum1	100	99.306	ENSCHIG00000012952	PUM1	100	98.823	Capra_hircus
ENSPEMG00000010009	Pum1	100	98.823	ENSTSYG00000008868	PUM1	100	98.823	Carlito_syrichta
ENSPEMG00000010009	Pum1	100	98.991	ENSCPOG00000031613	PUM1	100	98.991	Cavia_porcellus
ENSPEMG00000010009	Pum1	100	99.306	ENSCATG00000017991	PUM1	100	99.517	Cercocebus_atys
ENSPEMG00000010009	Pum1	100	99.075	ENSCLAG00000007662	PUM1	100	99.517	Chinchilla_lanigera
ENSPEMG00000010009	Pum1	100	99.306	ENSCSAG00000001028	PUM1	100	98.250	Chlorocebus_sabaeus
ENSPEMG00000010009	Pum1	92	99.306	ENSCHOG00000010245	PUM1	93	95.827	Choloepus_hoffmanni
ENSPEMG00000010009	Pum1	100	97.161	ENSCPBG00000009288	PUM1	100	97.585	Chrysemys_picta_bellii
ENSPEMG00000010009	Pum1	100	99.306	ENSCANG00000042606	PUM1	100	99.306	Colobus_angolensis_palliatus
ENSPEMG00000010009	Pum1	100	100.000	ENSCGRG00001024949	Pum1	100	100.000	Cricetulus_griseus_chok1gshd
ENSPEMG00000010009	Pum1	100	100.000	ENSCGRG00000014197	Pum1	100	100.000	Cricetulus_griseus_crigri
ENSPEMG00000010009	Pum1	90	76.182	ENSCSEG00000015981	pum1	100	77.572	Cynoglossus_semilaevis
ENSPEMG00000010009	Pum1	100	82.797	ENSCVAG00000007043	pum1	100	75.600	Cyprinodon_variegatus
ENSPEMG00000010009	Pum1	100	84.950	ENSDARG00000099256	pum1	100	79.414	Danio_rerio
ENSPEMG00000010009	Pum1	100	99.306	ENSDNOG00000010939	PUM1	100	98.570	Dasypus_novemcinctus
ENSPEMG00000010009	Pum1	85	99.517	ENSDORG00000001875	Pum1	100	99.517	Dipodomys_ordii
ENSPEMG00000010009	Pum1	85	100.000	ENSETEG00000004355	PUM1	87	93.171	Echinops_telfairi
ENSPEMG00000010009	Pum1	100	99.306	ENSEASG00005010813	PUM1	100	98.654	Equus_asinus_asinus
ENSPEMG00000010009	Pum1	100	98.654	ENSECAG00000021369	PUM1	100	98.654	Equus_caballus
ENSPEMG00000010009	Pum1	80	99.306	ENSEEUG00000003871	PUM1	74	99.661	Erinaceus_europaeus
ENSPEMG00000010009	Pum1	100	83.436	ENSELUG00000002409	pum1	100	83.251	Esox_lucius
ENSPEMG00000010009	Pum1	100	99.306	ENSFCAG00000010374	PUM1	100	99.583	Felis_catus
ENSPEMG00000010009	Pum1	100	96.168	ENSFALG00000001214	PUM1	97	95.896	Ficedula_albicollis
ENSPEMG00000010009	Pum1	100	98.991	ENSFDAG00000011319	PUM1	100	98.991	Fukomys_damarensis
ENSPEMG00000010009	Pum1	70	88.403	ENSGMOG00000010491	pum1	100	74.236	Gadus_morhua
ENSPEMG00000010009	Pum1	100	97.388	ENSGALG00000042598	PUM1	99	98.381	Gallus_gallus
ENSPEMG00000010009	Pum1	100	80.917	ENSGAFG00000015617	pum1	100	90.120	Gambusia_affinis
ENSPEMG00000010009	Pum1	100	82.759	ENSGACG00000005717	pum1	100	76.238	Gasterosteus_aculeatus
ENSPEMG00000010009	Pum1	100	96.891	ENSGAGG00000001290	PUM1	99	98.178	Gopherus_agassizii
ENSPEMG00000010009	Pum1	100	99.306	ENSGGOG00000011983	PUM1	100	99.306	Gorilla_gorilla
ENSPEMG00000010009	Pum1	100	83.045	ENSHBUG00000018718	pum1	100	76.179	Haplochromis_burtoni
ENSPEMG00000010009	Pum1	100	98.823	ENSHGLG00000013819	Pum1	100	98.823	Heterocephalus_glaber_female
ENSPEMG00000010009	Pum1	100	98.823	ENSHGLG00100008621	Pum1	100	98.823	Heterocephalus_glaber_male
ENSPEMG00000010009	Pum1	100	82.099	ENSIPUG00000020421	pum1	100	77.704	Ictalurus_punctatus
ENSPEMG00000010009	Pum1	100	99.359	ENSSTOG00000010757	PUM1	100	99.359	Ictidomys_tridecemlineatus
ENSPEMG00000010009	Pum1	100	99.306	ENSJJAG00000000530	Pum1	100	99.306	Jaculus_jaculus
ENSPEMG00000010009	Pum1	100	82.426	ENSKMAG00000003481	pum1	100	75.765	Kryptolebias_marmoratus
ENSPEMG00000010009	Pum1	100	82.156	ENSLBEG00000002527	pum1	100	75.642	Labrus_bergylta
ENSPEMG00000010009	Pum1	100	87.732	ENSLACG00000017188	PUM1	99	86.095	Latimeria_chalumnae
ENSPEMG00000010009	Pum1	100	90.920	ENSLOCG00000005210	pum1	99	87.886	Lepisosteus_oculatus
ENSPEMG00000010009	Pum1	100	98.318	ENSLAFG00000003178	PUM1	100	98.318	Loxodonta_africana
ENSPEMG00000010009	Pum1	100	99.306	ENSMFAG00000010291	PUM1	100	99.517	Macaca_fascicularis
ENSPEMG00000010009	Pum1	100	99.306	ENSMMUG00000013520	PUM1	100	99.306	Macaca_mulatta
ENSPEMG00000010009	Pum1	100	99.306	ENSMNEG00000034639	PUM1	100	99.306	Macaca_nemestrina
ENSPEMG00000010009	Pum1	100	99.306	ENSMLEG00000038743	PUM1	100	99.306	Mandrillus_leucophaeus
ENSPEMG00000010009	Pum1	100	83.168	ENSMAMG00000011606	pum1	100	76.261	Mastacembelus_armatus
ENSPEMG00000010009	Pum1	100	83.045	ENSMZEG00005005834	pum1	100	76.179	Maylandia_zebra
ENSPEMG00000010009	Pum1	100	97.056	ENSMGAG00000000724	PUM1	100	97.056	Meleagris_gallopavo
ENSPEMG00000010009	Pum1	100	100.000	ENSMAUG00000022090	Pum1	100	100.000	Mesocricetus_auratus
ENSPEMG00000010009	Pum1	100	98.991	ENSMICG00000007713	-	100	98.991	Microcebus_murinus
ENSPEMG00000010009	Pum1	99	97.183	ENSMICG00000012213	-	99	96.799	Microcebus_murinus
ENSPEMG00000010009	Pum1	100	99.663	ENSMOCG00000015463	Pum1	100	99.663	Microtus_ochrogaster
ENSPEMG00000010009	Pum1	90	88.046	ENSMMOG00000019817	pum1	100	90.602	Mola_mola
ENSPEMG00000010009	Pum1	100	97.229	ENSMODG00000017067	PUM1	100	97.229	Monodelphis_domestica
ENSPEMG00000010009	Pum1	100	99.306	MGP_CAROLIEiJ_G0026549	Pum1	100	99.306	Mus_caroli
ENSPEMG00000010009	Pum1	100	100.000	ENSMUSG00000028580	Pum1	100	100.000	Mus_musculus
ENSPEMG00000010009	Pum1	100	100.000	MGP_PahariEiJ_G0028881	Pum1	100	100.000	Mus_pahari
ENSPEMG00000010009	Pum1	100	100.000	MGP_SPRETEiJ_G0027529	Pum1	100	100.000	Mus_spretus
ENSPEMG00000010009	Pum1	100	99.306	ENSMPUG00000015454	PUM1	100	98.570	Mustela_putorius_furo
ENSPEMG00000010009	Pum1	100	99.306	ENSMLUG00000006490	PUM1	100	98.570	Myotis_lucifugus
ENSPEMG00000010009	Pum1	100	99.159	ENSNGAG00000002378	Pum1	100	99.159	Nannospalax_galili
ENSPEMG00000010009	Pum1	100	80.021	ENSNBRG00000010689	pum1	100	83.292	Neolamprologus_brichardi
ENSPEMG00000010009	Pum1	100	98.611	ENSNLEG00000001151	PUM1	100	98.611	Nomascus_leucogenys
ENSPEMG00000010009	Pum1	80	100.000	ENSMEUG00000000976	-	75	96.622	Notamacropus_eugenii
ENSPEMG00000010009	Pum1	84	100.000	ENSOPRG00000001776	PUM1	73	100.000	Ochotona_princeps
ENSPEMG00000010009	Pum1	100	98.823	ENSODEG00000003465	PUM1	100	98.823	Octodon_degus
ENSPEMG00000010009	Pum1	100	83.578	ENSONIG00000002290	pum1	100	76.510	Oreochromis_niloticus
ENSPEMG00000010009	Pum1	81	77.026	ENSOANG00000004902	-	100	76.483	Ornithorhynchus_anatinus
ENSPEMG00000010009	Pum1	100	99.306	ENSOCUG00000008641	PUM1	99	98.654	Oryctolagus_cuniculus
ENSPEMG00000010009	Pum1	100	83.787	ENSORLG00000011482	pum1	100	75.845	Oryzias_latipes
ENSPEMG00000010009	Pum1	100	83.787	ENSORLG00020019461	pum1	100	75.845	Oryzias_latipes_hni
ENSPEMG00000010009	Pum1	100	83.911	ENSORLG00015011375	pum1	100	75.927	Oryzias_latipes_hsok
ENSPEMG00000010009	Pum1	90	92.530	ENSOMEG00000009312	pum1	100	76.834	Oryzias_melastigma
ENSPEMG00000010009	Pum1	100	98.611	ENSOGAG00000011063	PUM1	100	96.138	Otolemur_garnettii
ENSPEMG00000010009	Pum1	100	99.306	ENSOARG00000001899	PUM1	100	98.792	Ovis_aries
ENSPEMG00000010009	Pum1	100	99.306	ENSPPAG00000044003	PUM1	100	99.306	Pan_paniscus
ENSPEMG00000010009	Pum1	100	99.306	ENSPPRG00000001370	PUM1	100	99.306	Panthera_pardus
ENSPEMG00000010009	Pum1	100	99.306	ENSPTIG00000010798	PUM1	100	99.306	Panthera_tigris_altaica
ENSPEMG00000010009	Pum1	100	99.306	ENSPTRG00000000453	PUM1	100	99.306	Pan_troglodytes
ENSPEMG00000010009	Pum1	100	99.306	ENSPANG00000016338	PUM1	100	99.517	Papio_anubis
ENSPEMG00000010009	Pum1	100	81.985	ENSPKIG00000010578	pum1	100	77.723	Paramormyrops_kingsleyae
ENSPEMG00000010009	Pum1	100	97.382	ENSPSIG00000014118	PUM1	100	97.309	Pelodiscus_sinensis
ENSPEMG00000010009	Pum1	100	78.482	ENSPMGG00000005836	pum1	100	81.618	Periophthalmus_magnuspinnatus
ENSPEMG00000010009	Pum1	100	97.275	ENSPCIG00000014151	PUM1	100	97.585	Phascolarctos_cinereus
ENSPEMG00000010009	Pum1	93	83.580	ENSPFOG00000007289	pum1	99	82.389	Poecilia_formosa
ENSPEMG00000010009	Pum1	100	82.797	ENSPLAG00000007256	pum1	100	77.905	Poecilia_latipinna
ENSPEMG00000010009	Pum1	85	82.797	ENSPMEG00000019543	pum1	99	78.085	Poecilia_mexicana
ENSPEMG00000010009	Pum1	100	82.797	ENSPREG00000005195	pum1	100	80.680	Poecilia_reticulata
ENSPEMG00000010009	Pum1	100	99.306	ENSPPYG00000001621	PUM1	100	97.115	Pongo_abelii
ENSPEMG00000010009	Pum1	84	98.765	ENSPCAG00000001979	PUM1	74	98.765	Procavia_capensis
ENSPEMG00000010009	Pum1	100	98.991	ENSPCOG00000004398	PUM1	100	98.991	Propithecus_coquereli
ENSPEMG00000010009	Pum1	100	99.306	ENSPVAG00000005207	PUM1	97	96.720	Pteropus_vampyrus
ENSPEMG00000010009	Pum1	100	83.045	ENSPNYG00000009518	pum1	100	81.446	Pundamilia_nyererei
ENSPEMG00000010009	Pum1	100	84.204	ENSPNAG00000026728	pum1	100	80.146	Pygocentrus_nattereri
ENSPEMG00000010009	Pum1	100	100.000	ENSRNOG00000011709	Pum1	100	99.243	Rattus_norvegicus
ENSPEMG00000010009	Pum1	100	99.306	ENSRBIG00000042521	PUM1	100	99.517	Rhinopithecus_bieti
ENSPEMG00000010009	Pum1	100	99.306	ENSRROG00000020156	PUM1	100	99.306	Rhinopithecus_roxellana
ENSPEMG00000010009	Pum1	100	99.306	ENSSBOG00000032037	PUM1	100	99.306	Saimiri_boliviensis_boliviensis
ENSPEMG00000010009	Pum1	100	97.065	ENSSHAG00000010918	PUM1	100	97.061	Sarcophilus_harrisii
ENSPEMG00000010009	Pum1	100	82.921	ENSSMAG00000010918	pum1	100	90.843	Scophthalmus_maximus
ENSPEMG00000010009	Pum1	100	83.045	ENSSDUG00000009021	pum1	100	76.427	Seriola_dumerili
ENSPEMG00000010009	Pum1	100	83.045	ENSSLDG00000009667	pum1	100	78.423	Seriola_lalandi_dorsalis
ENSPEMG00000010009	Pum1	99	99.306	ENSSARG00000003055	PUM1	91	99.558	Sorex_araneus
ENSPEMG00000010009	Pum1	100	97.136	ENSSPUG00000006267	PUM1	100	96.552	Sphenodon_punctatus
ENSPEMG00000010009	Pum1	100	83.292	ENSSPAG00000016636	pum1	100	77.413	Stegastes_partitus
ENSPEMG00000010009	Pum1	100	99.306	ENSSSCG00000003591	PUM1	100	99.583	Sus_scrofa
ENSPEMG00000010009	Pum1	100	82.797	ENSTRUG00000013121	pum1	100	82.797	Takifugu_rubripes
ENSPEMG00000010009	Pum1	100	80.941	ENSTNIG00000016983	pum1	99	76.495	Tetraodon_nigroviridis
ENSPEMG00000010009	Pum1	87	96.341	ENSTBEG00000013810	PUM1	89	96.341	Tupaia_belangeri
ENSPEMG00000010009	Pum1	92	98.815	ENSTTRG00000007436	PUM1	90	98.815	Tursiops_truncatus
ENSPEMG00000010009	Pum1	99	98.433	ENSUAMG00000018262	-	100	98.433	Ursus_americanus
ENSPEMG00000010009	Pum1	95	99.275	ENSUMAG00000009211	PUM1	100	99.275	Ursus_maritimus
ENSPEMG00000010009	Pum1	100	98.630	ENSVPAG00000005902	PUM1	92	99.322	Vicugna_pacos
ENSPEMG00000010009	Pum1	100	99.306	ENSVVUG00000014631	PUM1	100	99.275	Vulpes_vulpes
ENSPEMG00000010009	Pum1	100	87.702	ENSXETG00000012904	pum1	99	87.238	Xenopus_tropicalis
ENSPEMG00000010009	Pum1	100	80.917	ENSXMAG00000002945	pum1	100	77.801	Xiphophorus_maculatus