EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: ENSPEMG00000010096 (Gene tree)
Gene ID: 102921463
Gene Symbol: Ncl
Alias: -
Full Name: nucleolin
Gene Type: protein_coding
Species: Peromyscus_maniculatus_bairdii
Status: putative
Strand: Minus strand
Length: 24266 bases
Position: chrKI615539.1:1956554-1980819
Accession: 102921463
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPEMP00000008509	RRM_1	PF00076.22	2.9e-59	1	4
ENSPEMP00000008509	RRM_1	PF00076.22	2.9e-59	2	4
ENSPEMP00000008509	RRM_1	PF00076.22	2.9e-59	3	4
ENSPEMP00000008509	RRM_1	PF00076.22	2.9e-59	4	4
ENSPEMP00000008503	RRM_1	PF00076.22	3e-59	1	4
ENSPEMP00000008503	RRM_1	PF00076.22	3e-59	2	4
ENSPEMP00000008503	RRM_1	PF00076.22	3e-59	3	4
ENSPEMP00000008503	RRM_1	PF00076.22	3e-59	4	4
ENSPEMP00000008495	RRM_1	PF00076.22	5.3e-59	1	4
ENSPEMP00000008495	RRM_1	PF00076.22	5.3e-59	2	4
ENSPEMP00000008495	RRM_1	PF00076.22	5.3e-59	3	4
ENSPEMP00000008495	RRM_1	PF00076.22	5.3e-59	4	4

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPEMT00000012666	-	2127	-	ENSPEMP00000008509	708 (aa)	-	-
ENSPEMT00000012652	-	2391	-	ENSPEMP00000008495	796 (aa)	-	-
ENSPEMT00000012660	-	2529	XM_006984200	ENSPEMP00000008503	713 (aa)	XP_006984262	UPI00042AA5DB

Gene Model

Click here to download ENSPEMG00000010096's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPEMG00000010096's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPEMG00000010096	Ncl	51	31.737	ENSPEMG00000001090	Tia1	85	30.723
ENSPEMG00000010096	Ncl	59	33.065	ENSPEMG00000014538	Tial1	71	34.677