EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPEMG00000010240 (Gene tree)
Gene ID: 102919176
Gene Symbol: Snd1
Alias: -
Full Name: staphylococcal nuclease and tudor domain containing 1
Gene Type: protein_coding
Species: Peromyscus_maniculatus_bairdii
Status: putative
Strand: Plus strand
Length: 421594 bases
Position: chrKI615435.1:610431-1032024
Accession: 102919176
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPEMP00000008707	TUDOR	PF00567.24	5.7e-28	1	1
ENSPEMP00000008707	SNase	PF00565.17	1.1e-68	1	5
ENSPEMP00000008707	SNase	PF00565.17	1.1e-68	2	5
ENSPEMP00000008707	SNase	PF00565.17	1.1e-68	3	5
ENSPEMP00000008707	SNase	PF00565.17	1.1e-68	4	5
ENSPEMP00000008707	SNase	PF00565.17	1.1e-68	5	5

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPEMT00000012870	-	3503	XM_006979374	ENSPEMP00000008707	910 (aa)	XP_006979436	UPI00042AB4A6

Gene Model

Click here to download ENSPEMG00000010240's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPEMG00000010240's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPEMG00000010240	Snd1	100	97.802	ENSG00000197157	SND1	100	97.802	Homo_sapiens
ENSPEMG00000010240	Snd1	100	83.772	ENSAPOG00000017599	snd1	99	84.650	Acanthochromis_polyacanthus
ENSPEMG00000010240	Snd1	100	97.697	ENSAMEG00000004664	SND1	94	97.697	Ailuropoda_melanoleuca
ENSPEMG00000010240	Snd1	98	82.083	ENSACIG00000003551	snd1	99	81.960	Amphilophus_citrinellus
ENSPEMG00000010240	Snd1	100	83.553	ENSAOCG00000014166	snd1	99	84.427	Amphiprion_ocellaris
ENSPEMG00000010240	Snd1	100	83.553	ENSAPEG00000007067	snd1	99	84.427	Amphiprion_percula
ENSPEMG00000010240	Snd1	98	82.905	ENSATEG00000018475	snd1	88	84.151	Anabas_testudineus
ENSPEMG00000010240	Snd1	100	98.242	ENSANAG00000034463	SND1	100	98.242	Aotus_nancymaae
ENSPEMG00000010240	Snd1	99	83.077	ENSACLG00000022897	snd1	99	84.076	Astatotilapia_calliptera
ENSPEMG00000010240	Snd1	99	84.158	ENSAMXG00000016318	snd1	98	84.744	Astyanax_mexicanus
ENSPEMG00000010240	Snd1	100	98.242	ENSBTAG00000010692	SND1	100	98.242	Bos_taurus
ENSPEMG00000010240	Snd1	98	46.652	WBGene00006626	tsn-1	98	46.762	Caenorhabditis_elegans
ENSPEMG00000010240	Snd1	100	97.802	ENSCJAG00000017668	SND1	100	97.802	Callithrix_jacchus
ENSPEMG00000010240	Snd1	100	98.022	ENSCAFG00000001700	SND1	100	98.022	Canis_familiaris
ENSPEMG00000010240	Snd1	100	98.022	ENSCAFG00020021639	SND1	100	98.022	Canis_lupus_dingo
ENSPEMG00000010240	Snd1	100	98.242	ENSCHIG00000023390	SND1	100	98.242	Capra_hircus
ENSPEMG00000010240	Snd1	73	98.415	ENSTSYG00000004979	SND1	96	98.415	Carlito_syrichta
ENSPEMG00000010240	Snd1	99	84.889	ENSCAPG00000010677	SND1	98	84.933	Cavia_aperea
ENSPEMG00000010240	Snd1	100	97.802	ENSCPOG00000006251	SND1	100	97.802	Cavia_porcellus
ENSPEMG00000010240	Snd1	100	98.132	ENSCCAG00000036847	SND1	100	98.132	Cebus_capucinus
ENSPEMG00000010240	Snd1	100	98.022	ENSCATG00000035214	SND1	100	98.022	Cercocebus_atys
ENSPEMG00000010240	Snd1	100	97.802	ENSCLAG00000011796	SND1	100	97.802	Chinchilla_lanigera
ENSPEMG00000010240	Snd1	100	98.022	ENSCSAG00000010182	SND1	100	98.022	Chlorocebus_sabaeus
ENSPEMG00000010240	Snd1	78	90.196	ENSCHOG00000002218	SND1	86	90.196	Choloepus_hoffmanni
ENSPEMG00000010240	Snd1	100	91.099	ENSCPBG00000018094	SND1	98	92.040	Chrysemys_picta_bellii
ENSPEMG00000010240	Snd1	98	57.190	ENSCING00000000524	-	98	57.190	Ciona_intestinalis
ENSPEMG00000010240	Snd1	99	57.976	ENSCSAVG00000008807	-	99	58.122	Ciona_savignyi
ENSPEMG00000010240	Snd1	100	98.022	ENSCANG00000035119	SND1	100	98.022	Colobus_angolensis_palliatus
ENSPEMG00000010240	Snd1	100	99.011	ENSCGRG00001022514	Snd1	100	99.011	Cricetulus_griseus_chok1gshd
ENSPEMG00000010240	Snd1	97	99.095	ENSCGRG00000012277	Snd1	99	99.095	Cricetulus_griseus_crigri
ENSPEMG00000010240	Snd1	98	84.004	ENSCSEG00000008661	snd1	98	84.004	Cynoglossus_semilaevis
ENSPEMG00000010240	Snd1	100	83.772	ENSCVAG00000010316	snd1	100	83.448	Cyprinodon_variegatus
ENSPEMG00000010240	Snd1	100	84.228	ENSDARG00000006766	snd1	97	87.410	Danio_rerio
ENSPEMG00000010240	Snd1	97	95.152	ENSDNOG00000006795	SND1	100	95.152	Dasypus_novemcinctus
ENSPEMG00000010240	Snd1	100	98.571	ENSDORG00000000336	Snd1	100	98.571	Dipodomys_ordii
ENSPEMG00000010240	Snd1	98	50.486	FBgn0035121	Tudor-SN	98	50.486	Drosophila_melanogaster
ENSPEMG00000010240	Snd1	90	100.000	ENSETEG00000000375	SND1	92	100.000	Echinops_telfairi
ENSPEMG00000010240	Snd1	65	66.404	ENSEBUG00000014201	-	84	76.503	Eptatretus_burgeri
ENSPEMG00000010240	Snd1	100	96.436	ENSEASG00005008513	SND1	100	96.436	Equus_asinus_asinus
ENSPEMG00000010240	Snd1	100	98.022	ENSECAG00000011451	SND1	100	98.022	Equus_caballus
ENSPEMG00000010240	Snd1	100	87.033	ENSEEUG00000014737	SND1	100	87.033	Erinaceus_europaeus
ENSPEMG00000010240	Snd1	99	82.237	ENSELUG00000001805	snd1	95	83.166	Esox_lucius
ENSPEMG00000010240	Snd1	100	98.022	ENSFCAG00000008289	SND1	100	98.022	Felis_catus
ENSPEMG00000010240	Snd1	100	97.912	ENSFDAG00000015881	SND1	100	97.912	Fukomys_damarensis
ENSPEMG00000010240	Snd1	99	81.877	ENSFHEG00000004093	snd1	97	84.400	Fundulus_heteroclitus
ENSPEMG00000010240	Snd1	64	74.011	ENSGMOG00000018932	snd1	64	74.011	Gadus_morhua
ENSPEMG00000010240	Snd1	100	83.991	ENSGAFG00000008421	snd1	99	84.893	Gambusia_affinis
ENSPEMG00000010240	Snd1	100	53.746	ENSGACG00000019793	snd1	98	54.204	Gasterosteus_aculeatus
ENSPEMG00000010240	Snd1	100	98.022	ENSGGOG00000009614	SND1	100	98.022	Gorilla_gorilla
ENSPEMG00000010240	Snd1	99	83.590	ENSHBUG00000019135	snd1	99	84.076	Haplochromis_burtoni
ENSPEMG00000010240	Snd1	100	97.582	ENSHGLG00000003618	SND1	100	97.582	Heterocephalus_glaber_female
ENSPEMG00000010240	Snd1	99	97.127	ENSHGLG00100012449	SND1	100	97.127	Heterocephalus_glaber_male
ENSPEMG00000010240	Snd1	100	82.675	ENSHCOG00000005266	snd1	98	83.893	Hippocampus_comes
ENSPEMG00000010240	Snd1	100	82.604	ENSIPUG00000013279	snd1	98	83.537	Ictalurus_punctatus
ENSPEMG00000010240	Snd1	100	98.352	ENSSTOG00000002140	SND1	100	98.352	Ictidomys_tridecemlineatus
ENSPEMG00000010240	Snd1	100	98.571	ENSJJAG00000009561	Snd1	100	98.571	Jaculus_jaculus
ENSPEMG00000010240	Snd1	100	83.772	ENSKMAG00000016997	snd1	98	84.787	Kryptolebias_marmoratus
ENSPEMG00000010240	Snd1	100	84.899	ENSLBEG00000013563	snd1	99	83.315	Labrus_bergylta
ENSPEMG00000010240	Snd1	99	84.785	ENSLOCG00000015537	snd1	98	84.785	Lepisosteus_oculatus
ENSPEMG00000010240	Snd1	100	97.253	ENSLAFG00000009696	SND1	100	97.253	Loxodonta_africana
ENSPEMG00000010240	Snd1	100	98.022	ENSMFAG00000038114	SND1	100	98.022	Macaca_fascicularis
ENSPEMG00000010240	Snd1	100	98.022	ENSMMUG00000015432	SND1	100	98.022	Macaca_mulatta
ENSPEMG00000010240	Snd1	100	98.022	ENSMNEG00000039808	SND1	100	98.022	Macaca_nemestrina
ENSPEMG00000010240	Snd1	100	97.912	ENSMLEG00000029040	SND1	100	97.912	Mandrillus_leucophaeus
ENSPEMG00000010240	Snd1	99	83.793	ENSMAMG00000011739	snd1	98	84.487	Mastacembelus_armatus
ENSPEMG00000010240	Snd1	99	83.077	ENSMZEG00005005681	snd1	99	84.076	Maylandia_zebra
ENSPEMG00000010240	Snd1	100	98.132	ENSMICG00000000097	SND1	100	98.132	Microcebus_murinus
ENSPEMG00000010240	Snd1	100	99.670	ENSMOCG00000005040	Snd1	100	99.670	Microtus_ochrogaster
ENSPEMG00000010240	Snd1	100	83.443	ENSMMOG00000001795	snd1	99	84.316	Mola_mola
ENSPEMG00000010240	Snd1	99	94.872	ENSMODG00000015182	SND1	99	94.872	Monodelphis_domestica
ENSPEMG00000010240	Snd1	100	83.224	ENSMALG00000012071	snd1	98	84.040	Monopterus_albus
ENSPEMG00000010240	Snd1	100	99.011	MGP_CAROLIEiJ_G0028159	Snd1	100	99.011	Mus_caroli
ENSPEMG00000010240	Snd1	100	98.791	ENSMUSG00000001424	Snd1	100	98.791	Mus_musculus
ENSPEMG00000010240	Snd1	100	99.011	MGP_PahariEiJ_G0021917	Snd1	100	99.011	Mus_pahari
ENSPEMG00000010240	Snd1	100	99.011	MGP_SPRETEiJ_G0029159	Snd1	100	99.011	Mus_spretus
ENSPEMG00000010240	Snd1	100	97.912	ENSMPUG00000006545	SND1	100	97.912	Mustela_putorius_furo
ENSPEMG00000010240	Snd1	97	96.313	ENSMLUG00000017130	SND1	99	96.313	Myotis_lucifugus
ENSPEMG00000010240	Snd1	100	98.791	ENSNGAG00000011186	Snd1	100	98.791	Nannospalax_galili
ENSPEMG00000010240	Snd1	99	82.967	ENSNBRG00000006681	snd1	99	83.964	Neolamprologus_brichardi
ENSPEMG00000010240	Snd1	100	97.912	ENSNLEG00000012263	SND1	100	97.966	Nomascus_leucogenys
ENSPEMG00000010240	Snd1	91	100.000	ENSOPRG00000013405	SND1	91	100.000	Ochotona_princeps
ENSPEMG00000010240	Snd1	100	97.912	ENSODEG00000011502	SND1	100	97.912	Octodon_degus
ENSPEMG00000010240	Snd1	99	82.967	ENSONIG00000011481	snd1	96	83.964	Oreochromis_niloticus
ENSPEMG00000010240	Snd1	98	94.032	ENSOANG00000000817	SND1	99	93.423	Ornithorhynchus_anatinus
ENSPEMG00000010240	Snd1	100	96.813	ENSOCUG00000001620	SND1	100	96.813	Oryctolagus_cuniculus
ENSPEMG00000010240	Snd1	98	83.911	ENSORLG00000015201	snd1	98	83.911	Oryzias_latipes
ENSPEMG00000010240	Snd1	98	84.022	ENSORLG00020013991	snd1	98	84.022	Oryzias_latipes_hni
ENSPEMG00000010240	Snd1	98	84.022	ENSORLG00015012436	snd1	98	84.022	Oryzias_latipes_hsok
ENSPEMG00000010240	Snd1	100	83.114	ENSOMEG00000006406	snd1	98	84.340	Oryzias_melastigma
ENSPEMG00000010240	Snd1	100	97.588	ENSOGAG00000013356	SND1	94	97.588	Otolemur_garnettii
ENSPEMG00000010240	Snd1	97	95.593	ENSOARG00000002149	SND1	100	95.593	Ovis_aries
ENSPEMG00000010240	Snd1	100	97.912	ENSPPAG00000042947	SND1	100	97.912	Pan_paniscus
ENSPEMG00000010240	Snd1	100	98.022	ENSPPRG00000004494	SND1	100	98.022	Panthera_pardus
ENSPEMG00000010240	Snd1	100	97.912	ENSPTIG00000014214	SND1	100	97.912	Panthera_tigris_altaica
ENSPEMG00000010240	Snd1	100	97.912	ENSPTRG00000023911	SND1	100	97.912	Pan_troglodytes
ENSPEMG00000010240	Snd1	97	97.964	ENSPANG00000011997	SND1	99	97.964	Papio_anubis
ENSPEMG00000010240	Snd1	99	81.367	ENSPKIG00000023494	snd1	98	81.687	Paramormyrops_kingsleyae
ENSPEMG00000010240	Snd1	92	82.874	ENSPMGG00000003629	snd1	100	82.874	Periophthalmus_magnuspinnatus
ENSPEMG00000010240	Snd1	97	73.333	ENSPMAG00000007915	-	99	73.333	Petromyzon_marinus
ENSPEMG00000010240	Snd1	99	95.095	ENSPCIG00000011561	SND1	99	95.095	Phascolarctos_cinereus
ENSPEMG00000010240	Snd1	100	83.443	ENSPFOG00000001557	snd1	99	84.316	Poecilia_formosa
ENSPEMG00000010240	Snd1	100	83.443	ENSPLAG00000018459	snd1	96	84.316	Poecilia_latipinna
ENSPEMG00000010240	Snd1	100	83.882	ENSPMEG00000006803	snd1	99	84.761	Poecilia_mexicana
ENSPEMG00000010240	Snd1	100	83.772	ENSPREG00000002189	snd1	99	84.650	Poecilia_reticulata
ENSPEMG00000010240	Snd1	93	97.767	ENSPPYG00000017972	SND1	100	97.767	Pongo_abelii
ENSPEMG00000010240	Snd1	100	85.714	ENSPCAG00000011305	SND1	99	85.619	Procavia_capensis
ENSPEMG00000010240	Snd1	100	97.802	ENSPCOG00000026791	SND1	100	97.802	Propithecus_coquereli
ENSPEMG00000010240	Snd1	100	96.154	ENSPVAG00000013945	SND1	100	96.154	Pteropus_vampyrus
ENSPEMG00000010240	Snd1	99	83.077	ENSPNYG00000000932	snd1	99	84.076	Pundamilia_nyererei
ENSPEMG00000010240	Snd1	100	83.260	ENSPNAG00000001206	snd1	98	84.222	Pygocentrus_nattereri
ENSPEMG00000010240	Snd1	99	98.458	ENSRNOG00000031173	Snd1	99	98.458	Rattus_norvegicus
ENSPEMG00000010240	Snd1	73	98.496	ENSRBIG00000027782	-	93	98.669	Rhinopithecus_bieti
ENSPEMG00000010240	Snd1	100	98.022	ENSRROG00000033020	SND1	100	98.022	Rhinopithecus_roxellana
ENSPEMG00000010240	Snd1	100	98.022	ENSSBOG00000032461	SND1	100	98.022	Saimiri_boliviensis_boliviensis
ENSPEMG00000010240	Snd1	98	91.779	ENSSHAG00000015359	SND1	100	91.779	Sarcophilus_harrisii
ENSPEMG00000010240	Snd1	100	82.046	ENSSFOG00015001103	snd1	98	83.130	Scleropages_formosus
ENSPEMG00000010240	Snd1	98	83.893	ENSSMAG00000001932	snd1	93	83.630	Scophthalmus_maximus
ENSPEMG00000010240	Snd1	100	83.553	ENSSDUG00000002699	snd1	92	84.427	Seriola_dumerili
ENSPEMG00000010240	Snd1	100	76.316	ENSSLDG00000001950	snd1	98	77.086	Seriola_lalandi_dorsalis
ENSPEMG00000010240	Snd1	86	98.113	ENSSARG00000004877	SND1	92	98.113	Sorex_araneus
ENSPEMG00000010240	Snd1	73	86.783	ENSSPUG00000017586	SND1	96	86.783	Sphenodon_punctatus
ENSPEMG00000010240	Snd1	73	84.433	ENSSPAG00000021398	snd1	96	86.562	Stegastes_partitus
ENSPEMG00000010240	Snd1	100	97.692	ENSSSCG00000016590	SND1	100	97.692	Sus_scrofa
ENSPEMG00000010240	Snd1	99	83.394	ENSTRUG00000014067	snd1	98	83.557	Takifugu_rubripes
ENSPEMG00000010240	Snd1	100	83.224	ENSTNIG00000011019	snd1	98	84.228	Tetraodon_nigroviridis
ENSPEMG00000010240	Snd1	93	92.453	ENSTBEG00000003999	SND1	100	92.453	Tupaia_belangeri
ENSPEMG00000010240	Snd1	100	93.407	ENSTTRG00000006059	SND1	100	93.407	Tursiops_truncatus
ENSPEMG00000010240	Snd1	71	89.091	ENSUAMG00000002820	-	86	88.978	Ursus_americanus
ENSPEMG00000010240	Snd1	86	97.909	ENSUAMG00000005604	-	93	97.909	Ursus_americanus
ENSPEMG00000010240	Snd1	100	97.912	ENSUMAG00000005960	SND1	100	97.912	Ursus_maritimus
ENSPEMG00000010240	Snd1	77	100.000	ENSVPAG00000008302	SND1	74	100.000	Vicugna_pacos
ENSPEMG00000010240	Snd1	100	97.802	ENSVVUG00000007226	SND1	100	97.802	Vulpes_vulpes
ENSPEMG00000010240	Snd1	97	84.181	ENSXETG00000023043	snd1	100	84.096	Xenopus_tropicalis
ENSPEMG00000010240	Snd1	92	81.235	ENSXCOG00000013629	snd1	99	81.235	Xiphophorus_couchianus
ENSPEMG00000010240	Snd1	100	83.991	ENSXMAG00000011469	snd1	99	84.872	Xiphophorus_maculatus