EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPEMG00000010391 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Peromyscus_maniculatus_bairdii
Status: putative
Strand: Plus strand
Length: 1700 bases
Position: chrKI615454.1:2436045-2437744
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPEMP00000008915	CSD	PF00313.22	2.7e-26	1	1
ENSPEMP00000008919	CSD	PF00313.22	2.9e-26	1	1
ENSPEMP00000008923	CSD	PF00313.22	3e-26	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPEMT00000013080	-	744	-	ENSPEMP00000008915	247 (aa)	-	-
ENSPEMT00000013088	-	792	-	ENSPEMP00000008923	263 (aa)	-	-
ENSPEMT00000013084	-	765	-	ENSPEMP00000008919	254 (aa)	-	-

Gene Model

Click here to download ENSPEMG00000010391's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPEMG00000010391's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPEMG00000010391	-	92	99.585	ENSPEMG00000012132	-	98	99.585

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPEMG00000010391	-	85	91.150	ENSG00000060138	YBX3	93	95.349	Homo_sapiens
ENSPEMG00000010391	-	83	69.097	ENSAMEG00000009393	YBX3	64	92.035	Ailuropoda_melanoleuca
ENSPEMG00000010391	-	81	98.077	ENSAPLG00000003147	YBX3	76	98.077	Anas_platyrhynchos
ENSPEMG00000010391	-	85	92.035	ENSANAG00000024492	-	82	89.113	Aotus_nancymaae
ENSPEMG00000010391	-	84	66.667	ENSANAG00000033366	-	83	63.374	Aotus_nancymaae
ENSPEMG00000010391	-	91	68.051	ENSBTAG00000009663	YBX3	68	87.387	Bos_taurus
ENSPEMG00000010391	-	85	91.593	ENSCJAG00000021660	-	82	88.306	Callithrix_jacchus
ENSPEMG00000010391	-	93	66.023	ENSCJAG00000033824	-	94	66.926	Callithrix_jacchus
ENSPEMG00000010391	-	82	93.548	ENSCAFG00000013401	YBX3	100	93.548	Canis_familiaris
ENSPEMG00000010391	-	84	89.686	ENSCAFG00020006412	YBX3	80	87.805	Canis_lupus_dingo
ENSPEMG00000010391	-	91	68.051	ENSCHIG00000010863	YBX3	63	96.491	Capra_hircus
ENSPEMG00000010391	-	82	91.743	ENSTSYG00000004204	-	95	85.306	Carlito_syrichta
ENSPEMG00000010391	-	84	81.696	ENSTSYG00000035821	-	75	80.804	Carlito_syrichta
ENSPEMG00000010391	-	60	97.727	ENSCAPG00000015039	YBX3	65	97.727	Cavia_aperea
ENSPEMG00000010391	-	77	100.000	ENSCPOG00000011329	YBX3	90	89.344	Cavia_porcellus
ENSPEMG00000010391	-	85	91.593	ENSCCAG00000016469	YBX3	82	88.710	Cebus_capucinus
ENSPEMG00000010391	-	85	90.265	ENSCATG00000034411	YBX3	82	87.903	Cercocebus_atys
ENSPEMG00000010391	-	70	88.000	ENSCLAG00000016030	YBX3	65	97.727	Chinchilla_lanigera
ENSPEMG00000010391	-	85	65.763	ENSCSAG00000008744	YBX3	62	91.525	Chlorocebus_sabaeus
ENSPEMG00000010391	-	83	84.091	ENSCPBG00000014147	YBX3	83	81.328	Chrysemys_picta_bellii
ENSPEMG00000010391	-	67	58.140	ENSCING00000010654	yb1/2/3	62	52.500	Ciona_intestinalis
ENSPEMG00000010391	-	85	90.708	ENSCANG00000036801	YBX3	100	87.805	Colobus_angolensis_palliatus
ENSPEMG00000010391	-	92	98.340	ENSCGRG00001016148	Ybx3	83	98.340	Cricetulus_griseus_chok1gshd
ENSPEMG00000010391	-	82	70.934	ENSCGRG00000004563	Ybx3	80	97.248	Cricetulus_griseus_crigri
ENSPEMG00000010391	-	80	88.000	ENSDORG00000009103	Ybx3	64	84.685	Dipodomys_ordii
ENSPEMG00000010391	-	81	58.042	ENSETEG00000002557	YBX3	69	100.000	Echinops_telfairi
ENSPEMG00000010391	-	85	85.778	ENSEASG00005014726	YBX3	81	83.333	Equus_asinus_asinus
ENSPEMG00000010391	-	85	90.667	ENSECAG00000013777	YBX3	82	89.024	Equus_caballus
ENSPEMG00000010391	-	81	64.437	ENSEEUG00000010415	YBX3	69	100.000	Erinaceus_europaeus
ENSPEMG00000010391	-	85	91.593	ENSFCAG00000027748	YBX3	81	90.688	Felis_catus
ENSPEMG00000010391	-	81	94.444	ENSFALG00000003661	YBX3	71	98.837	Ficedula_albicollis
ENSPEMG00000010391	-	72	78.667	ENSFDAG00000021192	YBX3	64	97.727	Fukomys_damarensis
ENSPEMG00000010391	-	95	74.803	ENSGALG00000031890	YBX3	87	76.378	Gallus_gallus
ENSPEMG00000010391	-	83	80.543	ENSGAGG00000017780	YBX3	83	80.833	Gopherus_agassizii
ENSPEMG00000010391	-	85	91.150	ENSGGOG00000001352	YBX3	82	88.710	Gorilla_gorilla
ENSPEMG00000010391	-	77	82.126	ENSHGLG00000015495	-	79	81.905	Heterocephalus_glaber_female
ENSPEMG00000010391	-	88	67.254	ENSHGLG00000014798	-	93	60.269	Heterocephalus_glaber_female
ENSPEMG00000010391	-	82	91.743	ENSHGLG00100003589	YBX3	87	91.743	Heterocephalus_glaber_male
ENSPEMG00000010391	-	85	69.611	ENSSTOG00000032577	-	69	88.288	Ictidomys_tridecemlineatus
ENSPEMG00000010391	-	82	63.636	ENSSTOG00000002108	-	50	98.864	Ictidomys_tridecemlineatus
ENSPEMG00000010391	-	85	64.202	ENSJJAG00000014239	Ybx3	100	70.130	Jaculus_jaculus
ENSPEMG00000010391	-	74	89.333	ENSLAFG00000017247	YBX3	81	88.288	Loxodonta_africana
ENSPEMG00000010391	-	85	90.708	ENSMFAG00000039369	YBX3	82	88.306	Macaca_fascicularis
ENSPEMG00000010391	-	85	65.763	ENSMMUG00000022469	YBX3	71	91.525	Macaca_mulatta
ENSPEMG00000010391	-	85	90.708	ENSMNEG00000045109	YBX3	82	87.903	Macaca_nemestrina
ENSPEMG00000010391	-	82	91.705	ENSMLEG00000033618	YBX3	76	91.705	Mandrillus_leucophaeus
ENSPEMG00000010391	-	80	98.095	ENSMGAG00000014224	YBX3	100	82.407	Meleagris_gallopavo
ENSPEMG00000010391	-	92	97.510	ENSMAUG00000012185	Ybx3	96	97.510	Mesocricetus_auratus
ENSPEMG00000010391	-	73	92.000	ENSMICG00000038002	-	62	94.017	Microcebus_murinus
ENSPEMG00000010391	-	91	78.926	ENSMICG00000031459	-	85	76.860	Microcebus_murinus
ENSPEMG00000010391	-	89	99.149	ENSMOCG00000016291	Ybx3	100	99.149	Microtus_ochrogaster
ENSPEMG00000010391	-	81	61.837	ENSMODG00000018248	YBX3	64	97.727	Monodelphis_domestica
ENSPEMG00000010391	-	92	97.095	MGP_CAROLIEiJ_G0028947	Ybx3	83	97.095	Mus_caroli
ENSPEMG00000010391	-	92	96.680	ENSMUSG00000030189	Ybx3	83	96.680	Mus_musculus
ENSPEMG00000010391	-	92	97.510	MGP_PahariEiJ_G0022709	Ybx3	83	97.510	Mus_pahari
ENSPEMG00000010391	-	92	97.095	MGP_SPRETEiJ_G0029994	Ybx3	83	97.095	Mus_spretus
ENSPEMG00000010391	-	70	81.538	ENSMPUG00000011810	YBX3	60	86.607	Mustela_putorius_furo
ENSPEMG00000010391	-	73	62.687	ENSMLUG00000007476	YBX3	80	91.919	Myotis_lucifugus
ENSPEMG00000010391	-	85	88.444	ENSNGAG00000000710	Ybx3	100	86.992	Nannospalax_galili
ENSPEMG00000010391	-	85	87.611	ENSNLEG00000034844	YBX3	88	83.871	Nomascus_leucogenys
ENSPEMG00000010391	-	74	88.000	ENSODEG00000017957	YBX3	67	83.051	Octodon_degus
ENSPEMG00000010391	-	74	90.667	ENSOCUG00000001889	YBX3	75	88.393	Oryctolagus_cuniculus
ENSPEMG00000010391	-	84	98.230	ENSOGAG00000013245	YBX3	69	89.404	Otolemur_garnettii
ENSPEMG00000010391	-	78	98.969	ENSOARG00000020919	YBX3	70	100.000	Ovis_aries
ENSPEMG00000010391	-	84	91.071	ENSPPAG00000039068	YBX3	86	85.375	Pan_paniscus
ENSPEMG00000010391	-	85	92.035	ENSPPRG00000005859	YBX3	81	91.093	Panthera_pardus
ENSPEMG00000010391	-	81	67.845	ENSPTIG00000005322	YBX3	57	98.864	Panthera_tigris_altaica
ENSPEMG00000010391	-	85	91.150	ENSPTRG00000004681	YBX3	81	88.710	Pan_troglodytes
ENSPEMG00000010391	-	85	90.265	ENSPANG00000010280	YBX3	82	87.903	Papio_anubis
ENSPEMG00000010391	-	81	85.581	ENSPSIG00000009247	YBX3	100	85.581	Pelodiscus_sinensis
ENSPEMG00000010391	-	71	58.268	ENSPCIG00000029949	YBX3	71	98.592	Phascolarctos_cinereus
ENSPEMG00000010391	-	85	65.763	ENSPPYG00000004279	YBX3	62	91.525	Pongo_abelii
ENSPEMG00000010391	-	60	90.625	ENSPCAG00000001397	YBX3	69	92.593	Procavia_capensis
ENSPEMG00000010391	-	60	71.166	ENSPCOG00000011663	YBX3	57	81.333	Propithecus_coquereli
ENSPEMG00000010391	-	87	94.783	ENSRNOG00000005480	Ybx3	79	94.783	Rattus_norvegicus
ENSPEMG00000010391	-	84	91.071	ENSRBIG00000039208	YBX3	82	87.500	Rhinopithecus_bieti
ENSPEMG00000010391	-	85	91.150	ENSRROG00000029638	YBX3	82	88.306	Rhinopithecus_roxellana
ENSPEMG00000010391	-	83	92.727	ENSSBOG00000030573	YBX3	74	92.727	Saimiri_boliviensis_boliviensis
ENSPEMG00000010391	-	74	98.837	ENSSHAG00000003262	YBX3	66	98.837	Sarcophilus_harrisii
ENSPEMG00000010391	-	55	89.928	ENSSPUG00000009911	-	75	84.472	Sphenodon_punctatus
ENSPEMG00000010391	-	83	91.855	ENSSSCG00000000633	YBX3	80	89.600	Sus_scrofa
ENSPEMG00000010391	-	80	97.143	ENSTGUG00000012047	YBX3	75	97.143	Taeniopygia_guttata
ENSPEMG00000010391	-	94	61.875	ENSTBEG00000012570	YBX3	57	93.617	Tupaia_belangeri
ENSPEMG00000010391	-	58	80.000	ENSTTRG00000008045	YBX3	77	92.391	Tursiops_truncatus
ENSPEMG00000010391	-	78	62.681	ENSUAMG00000016662	YBX3	81	88.288	Ursus_americanus
ENSPEMG00000010391	-	81	67.845	ENSUMAG00000016118	YBX3	66	98.864	Ursus_maritimus
ENSPEMG00000010391	-	65	100.000	ENSVPAG00000000876	YBX3	62	100.000	Vicugna_pacos
ENSPEMG00000010391	-	78	61.957	ENSVVUG00000004956	YBX3	80	87.387	Vulpes_vulpes
ENSPEMG00000010391	-	82	72.273	ENSXETG00000016239	ybx3	94	69.787	Xenopus_tropicalis