EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPEMG00000010463 (Gene tree)
Gene ID: 102928029
Gene Symbol: Sf1
Alias: -
Full Name: splicing factor 1
Gene Type: protein_coding
Species: Peromyscus_maniculatus_bairdii
Status: putative
Strand: Plus strand
Length: 13096 bases
Position: chrKI615462.1:3523957-3537052
Accession: 102928029
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPEMP00000009039	KH_1	PF00013.29	2.3e-07	1	1
ENSPEMP00000009033	KH_1	PF00013.29	2.7e-07	1	1
ENSPEMP00000009040	KH_1	PF00013.29	2.8e-07	1	1
ENSPEMP00000009039	zf-CCHC	PF00098.23	0.00014	1	1
ENSPEMP00000009033	zf-CCHC	PF00098.23	0.00018	1	1
ENSPEMP00000009040	zf-CCHC	PF00098.23	0.00019	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPEMT00000013200	-	3035	XM_006980698	ENSPEMP00000009033	638 (aa)	XP_006980760	UPI00042AF806
ENSPEMT00000013206	-	2830	XM_006980702	ENSPEMP00000009039	571 (aa)	XP_006980764	UPI00042A945A
ENSPEMT00000013207	-	1968	-	ENSPEMP00000009040	655 (aa)	-	-

Gene Model

Click here to download ENSPEMG00000010463's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPEMG00000010463's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPEMG00000010463	Sf1	66	80.928	ENSAPOG00000012341	sf1	60	76.047	Acanthochromis_polyacanthus
ENSPEMG00000010463	Sf1	98	94.255	ENSAMEG00000017828	SF1	83	99.250	Ailuropoda_melanoleuca
ENSPEMG00000010463	Sf1	65	83.245	ENSACIG00000016514	sf1	62	78.282	Amphilophus_citrinellus
ENSPEMG00000010463	Sf1	66	80.412	ENSAOCG00000010934	sf1	61	76.047	Amphiprion_ocellaris
ENSPEMG00000010463	Sf1	66	80.412	ENSAPEG00000009498	sf1	61	76.047	Amphiprion_percula
ENSPEMG00000010463	Sf1	65	82.105	ENSATEG00000001894	sf1	60	77.488	Anabas_testudineus
ENSPEMG00000010463	Sf1	92	87.692	ENSANAG00000022607	-	97	86.905	Aotus_nancymaae
ENSPEMG00000010463	Sf1	100	99.216	ENSANAG00000026664	-	100	99.216	Aotus_nancymaae
ENSPEMG00000010463	Sf1	64	84.824	ENSACLG00000007633	sf1	61	78.177	Astatotilapia_calliptera
ENSPEMG00000010463	Sf1	64	86.096	ENSAMXG00000003630	sf1	50	79.462	Astyanax_mexicanus
ENSPEMG00000010463	Sf1	94	99.165	ENSBTAG00000001035	SF1	94	99.165	Bos_taurus
ENSPEMG00000010463	Sf1	100	99.373	ENSCJAG00000002780	SF1	100	99.373	Callithrix_jacchus
ENSPEMG00000010463	Sf1	100	99.373	ENSCAFG00000014239	SF1	100	99.373	Canis_familiaris
ENSPEMG00000010463	Sf1	100	99.373	ENSCAFG00020014381	SF1	100	99.373	Canis_lupus_dingo
ENSPEMG00000010463	Sf1	94	99.165	ENSCHIG00000025867	SF1	97	99.055	Capra_hircus
ENSPEMG00000010463	Sf1	53	98.566	ENSTSYG00000033618	SF1	88	100.000	Carlito_syrichta
ENSPEMG00000010463	Sf1	98	97.857	ENSCAPG00000010762	SF1	100	97.857	Cavia_aperea
ENSPEMG00000010463	Sf1	98	98.884	ENSCPOG00000012290	SF1	100	98.884	Cavia_porcellus
ENSPEMG00000010463	Sf1	89	84.764	ENSCCAG00000023781	-	94	84.629	Cebus_capucinus
ENSPEMG00000010463	Sf1	100	99.373	ENSCCAG00000037881	SF1	100	99.373	Cebus_capucinus
ENSPEMG00000010463	Sf1	100	99.373	ENSCATG00000011564	SF1	100	99.373	Cercocebus_atys
ENSPEMG00000010463	Sf1	83	99.055	ENSCSAG00000007258	SF1	97	99.055	Chlorocebus_sabaeus
ENSPEMG00000010463	Sf1	72	92.961	ENSCHOG00000006008	SF1	79	93.062	Choloepus_hoffmanni
ENSPEMG00000010463	Sf1	81	86.293	ENSCPBG00000023763	SF1	66	84.942	Chrysemys_picta_bellii
ENSPEMG00000010463	Sf1	54	67.093	ENSCING00000005564	-	72	61.667	Ciona_intestinalis
ENSPEMG00000010463	Sf1	90	47.245	ENSCSAVG00000009055	-	87	56.438	Ciona_savignyi
ENSPEMG00000010463	Sf1	100	99.373	ENSCANG00000042201	SF1	100	99.373	Colobus_angolensis_palliatus
ENSPEMG00000010463	Sf1	100	99.299	ENSCGRG00001003677	Sf1	100	99.299	Cricetulus_griseus_chok1gshd
ENSPEMG00000010463	Sf1	98	99.286	ENSCGRG00000001708	Sf1	100	99.286	Cricetulus_griseus_crigri
ENSPEMG00000010463	Sf1	69	78.818	ENSCSEG00000014375	sf1	57	76.077	Cynoglossus_semilaevis
ENSPEMG00000010463	Sf1	65	84.865	ENSCVAG00000001670	sf1	63	78.922	Cyprinodon_variegatus
ENSPEMG00000010463	Sf1	70	81.638	ENSDARG00000008188	sf1	72	79.021	Danio_rerio
ENSPEMG00000010463	Sf1	83	98.488	ENSDNOG00000001282	SF1	97	98.488	Dasypus_novemcinctus
ENSPEMG00000010463	Sf1	100	99.216	ENSDORG00000016334	Sf1	100	99.216	Dipodomys_ordii
ENSPEMG00000010463	Sf1	87	91.712	ENSETEG00000012830	SF1	82	90.940	Echinops_telfairi
ENSPEMG00000010463	Sf1	83	98.677	ENSEASG00005018272	SF1	97	98.677	Equus_asinus_asinus
ENSPEMG00000010463	Sf1	83	98.866	ENSECAG00000024544	SF1	97	98.866	Equus_caballus
ENSPEMG00000010463	Sf1	69	98.473	ENSEEUG00000001058	SF1	100	98.473	Erinaceus_europaeus
ENSPEMG00000010463	Sf1	65	81.963	ENSELUG00000013225	sf1	54	79.426	Esox_lucius
ENSPEMG00000010463	Sf1	100	99.373	ENSFCAG00000012231	SF1	100	99.373	Felis_catus
ENSPEMG00000010463	Sf1	98	98.214	ENSFDAG00000009833	SF1	100	98.214	Fukomys_damarensis
ENSPEMG00000010463	Sf1	66	80.670	ENSFHEG00000022656	sf1	61	76.334	Fundulus_heteroclitus
ENSPEMG00000010463	Sf1	66	84.416	ENSGAFG00000019284	sf1	78	80.476	Gambusia_affinis
ENSPEMG00000010463	Sf1	67	80.759	ENSGACG00000000826	sf1	68	77.014	Gasterosteus_aculeatus
ENSPEMG00000010463	Sf1	74	89.387	ENSGAGG00000021691	SF1	72	85.549	Gopherus_agassizii
ENSPEMG00000010463	Sf1	65	83.421	ENSHBUG00000011598	sf1	61	75.973	Haplochromis_burtoni
ENSPEMG00000010463	Sf1	100	99.216	ENSHGLG00000009541	SF1	100	99.216	Heterocephalus_glaber_female
ENSPEMG00000010463	Sf1	76	86.222	ENSHGLG00100008255	-	94	85.714	Heterocephalus_glaber_male
ENSPEMG00000010463	Sf1	68	88.736	ENSHGLG00100008076	-	87	86.806	Heterocephalus_glaber_male
ENSPEMG00000010463	Sf1	98	98.214	ENSHGLG00100013879	-	100	98.214	Heterocephalus_glaber_male
ENSPEMG00000010463	Sf1	66	81.606	ENSHCOG00000011388	sf1	59	76.372	Hippocampus_comes
ENSPEMG00000010463	Sf1	98	82.028	ENSSTOG00000024353	-	98	82.918	Ictidomys_tridecemlineatus
ENSPEMG00000010463	Sf1	98	99.362	ENSSTOG00000009790	-	100	99.362	Ictidomys_tridecemlineatus
ENSPEMG00000010463	Sf1	100	99.687	ENSJJAG00000011788	Sf1	100	99.687	Jaculus_jaculus
ENSPEMG00000010463	Sf1	67	82.908	ENSKMAG00000005854	sf1	63	77.518	Kryptolebias_marmoratus
ENSPEMG00000010463	Sf1	65	83.246	ENSLBEG00000019836	sf1	64	78.469	Labrus_bergylta
ENSPEMG00000010463	Sf1	73	78.333	ENSLACG00000018493	SF1	74	78.554	Latimeria_chalumnae
ENSPEMG00000010463	Sf1	65	85.146	ENSLOCG00000002130	sf1	59	80.049	Lepisosteus_oculatus
ENSPEMG00000010463	Sf1	98	98.447	ENSLAFG00000007201	SF1	99	98.447	Loxodonta_africana
ENSPEMG00000010463	Sf1	100	99.373	ENSMFAG00000033122	SF1	100	99.373	Macaca_fascicularis
ENSPEMG00000010463	Sf1	100	99.373	ENSMMUG00000022606	SF1	100	99.373	Macaca_mulatta
ENSPEMG00000010463	Sf1	100	96.212	ENSMNEG00000037901	SF1	100	96.212	Macaca_nemestrina
ENSPEMG00000010463	Sf1	98	99.363	ENSMLEG00000040706	SF1	99	97.227	Mandrillus_leucophaeus
ENSPEMG00000010463	Sf1	66	81.347	ENSMAMG00000001780	sf1	59	77.804	Mastacembelus_armatus
ENSPEMG00000010463	Sf1	65	83.158	ENSMZEG00005009196	sf1	61	75.744	Maylandia_zebra
ENSPEMG00000010463	Sf1	100	99.843	ENSMAUG00000014064	Sf1	100	99.843	Mesocricetus_auratus
ENSPEMG00000010463	Sf1	100	99.373	ENSMICG00000001202	SF1	100	99.373	Microcebus_murinus
ENSPEMG00000010463	Sf1	100	99.843	ENSMOCG00000022038	Sf1	100	99.843	Microtus_ochrogaster
ENSPEMG00000010463	Sf1	65	81.720	ENSMMOG00000020474	sf1	60	77.053	Mola_mola
ENSPEMG00000010463	Sf1	75	97.658	ENSMODG00000029407	SF1	97	94.183	Monodelphis_domestica
ENSPEMG00000010463	Sf1	65	83.422	ENSMALG00000020521	sf1	68	76.596	Monopterus_albus
ENSPEMG00000010463	Sf1	100	99.843	MGP_CAROLIEiJ_G0022607	Sf1	100	100.000	Mus_caroli
ENSPEMG00000010463	Sf1	100	99.843	ENSMUSG00000024949	Sf1	100	100.000	Mus_musculus
ENSPEMG00000010463	Sf1	100	99.530	MGP_PahariEiJ_G0014101	Sf1	100	100.000	Mus_pahari
ENSPEMG00000010463	Sf1	100	99.843	MGP_SPRETEiJ_G0023518	Sf1	100	100.000	Mus_spretus
ENSPEMG00000010463	Sf1	93	98.985	ENSMPUG00000012684	SF1	92	98.985	Mustela_putorius_furo
ENSPEMG00000010463	Sf1	93	98.816	ENSMLUG00000015217	-	92	98.816	Myotis_lucifugus
ENSPEMG00000010463	Sf1	79	93.348	ENSMLUG00000029800	-	78	94.273	Myotis_lucifugus
ENSPEMG00000010463	Sf1	100	99.373	ENSNGAG00000005550	Sf1	100	99.373	Nannospalax_galili
ENSPEMG00000010463	Sf1	65	84.225	ENSNBRG00000017606	sf1	60	79.805	Neolamprologus_brichardi
ENSPEMG00000010463	Sf1	100	99.216	ENSNLEG00000005236	-	100	99.216	Nomascus_leucogenys
ENSPEMG00000010463	Sf1	80	98.051	ENSMEUG00000013424	SF1	97	98.051	Notamacropus_eugenii
ENSPEMG00000010463	Sf1	74	98.526	ENSOPRG00000005008	SF1	96	98.526	Ochotona_princeps
ENSPEMG00000010463	Sf1	100	90.687	ENSODEG00000006102	-	100	90.687	Octodon_degus
ENSPEMG00000010463	Sf1	65	82.895	ENSONIG00000015728	sf1	61	75.515	Oreochromis_niloticus
ENSPEMG00000010463	Sf1	62	87.151	ENSOANG00000002909	SF1	96	87.212	Ornithorhynchus_anatinus
ENSPEMG00000010463	Sf1	99	99.206	ENSOCUG00000026486	SF1	100	99.206	Oryctolagus_cuniculus
ENSPEMG00000010463	Sf1	67	81.074	ENSORLG00000011853	sf1	59	77.273	Oryzias_latipes
ENSPEMG00000010463	Sf1	68	79.750	ENSORLG00020011834	sf1	60	76.291	Oryzias_latipes_hni
ENSPEMG00000010463	Sf1	65	80.890	ENSORLG00015012855	sf1	59	76.978	Oryzias_latipes_hsok
ENSPEMG00000010463	Sf1	67	80.051	ENSOMEG00000005210	sf1	60	76.794	Oryzias_melastigma
ENSPEMG00000010463	Sf1	100	99.216	ENSOGAG00000016196	SF1	100	99.216	Otolemur_garnettii
ENSPEMG00000010463	Sf1	83	94.585	ENSOARG00000009166	SF1	82	99.358	Ovis_aries
ENSPEMG00000010463	Sf1	99	95.886	ENSPPAG00000002799	-	100	95.886	Pan_paniscus
ENSPEMG00000010463	Sf1	98	99.362	ENSPPRG00000013566	SF1	98	99.362	Panthera_pardus
ENSPEMG00000010463	Sf1	99	90.088	ENSPTIG00000016141	SF1	99	89.242	Panthera_tigris_altaica
ENSPEMG00000010463	Sf1	100	99.373	ENSPTRG00000003846	SF1	100	99.373	Pan_troglodytes
ENSPEMG00000010463	Sf1	100	96.212	ENSPANG00000020754	SF1	100	96.212	Papio_anubis
ENSPEMG00000010463	Sf1	58	78.529	ENSPKIG00000012116	sf1	88	74.499	Paramormyrops_kingsleyae
ENSPEMG00000010463	Sf1	56	87.812	ENSPSIG00000003610	SF1	84	82.710	Pelodiscus_sinensis
ENSPEMG00000010463	Sf1	59	72.321	ENSPMAG00000008272	sf1	53	67.209	Petromyzon_marinus
ENSPEMG00000010463	Sf1	100	97.962	ENSPCIG00000018173	SF1	100	97.962	Phascolarctos_cinereus
ENSPEMG00000010463	Sf1	66	86.280	ENSPFOG00000013683	sf1	68	81.384	Poecilia_formosa
ENSPEMG00000010463	Sf1	65	84.392	ENSPLAG00000018076	sf1	61	79.426	Poecilia_latipinna
ENSPEMG00000010463	Sf1	65	84.392	ENSPMEG00000005726	sf1	62	79.665	Poecilia_mexicana
ENSPEMG00000010463	Sf1	65	83.465	ENSPREG00000004155	sf1	59	78.947	Poecilia_reticulata
ENSPEMG00000010463	Sf1	100	99.216	ENSPPYG00000003098	-	100	99.216	Pongo_abelii
ENSPEMG00000010463	Sf1	82	97.338	ENSPCAG00000013631	SF1	78	97.338	Procavia_capensis
ENSPEMG00000010463	Sf1	100	99.216	ENSPCOG00000027546	SF1	100	99.216	Propithecus_coquereli
ENSPEMG00000010463	Sf1	82	97.338	ENSPVAG00000016938	SF1	79	97.338	Pteropus_vampyrus
ENSPEMG00000010463	Sf1	65	83.158	ENSPNYG00000004673	sf1	60	76.389	Pundamilia_nyererei
ENSPEMG00000010463	Sf1	65	85.450	ENSPNAG00000013072	sf1	59	80.535	Pygocentrus_nattereri
ENSPEMG00000010463	Sf1	94	99.499	ENSRNOG00000021085	Sf1	94	99.499	Rattus_norvegicus
ENSPEMG00000010463	Sf1	100	95.298	ENSRBIG00000042818	SF1	100	95.298	Rhinopithecus_bieti
ENSPEMG00000010463	Sf1	100	96.147	ENSRROG00000045655	SF1	100	96.147	Rhinopithecus_roxellana
ENSPEMG00000010463	Sf1	51	43.421	YLR116W	MSL5	61	43.182	Saccharomyces_cerevisiae
ENSPEMG00000010463	Sf1	93	78.759	ENSSBOG00000022267	-	99	81.010	Saimiri_boliviensis_boliviensis
ENSPEMG00000010463	Sf1	71	91.707	ENSSHAG00000006841	SF1	75	92.927	Sarcophilus_harrisii
ENSPEMG00000010463	Sf1	69	80.702	ENSSFOG00015021978	sf1	55	77.053	Scleropages_formosus
ENSPEMG00000010463	Sf1	72	76.815	ENSSMAG00000007549	sf1	63	76.526	Scophthalmus_maximus
ENSPEMG00000010463	Sf1	66	80.720	ENSSDUG00000003903	sf1	63	76.636	Seriola_dumerili
ENSPEMG00000010463	Sf1	66	80.720	ENSSLDG00000013075	sf1	61	76.636	Seriola_lalandi_dorsalis
ENSPEMG00000010463	Sf1	81	95.164	ENSSARG00000008180	SF1	100	95.164	Sorex_araneus
ENSPEMG00000010463	Sf1	79	82.567	ENSSPUG00000012907	SF1	86	81.034	Sphenodon_punctatus
ENSPEMG00000010463	Sf1	66	80.412	ENSSPAG00000019060	sf1	61	74.828	Stegastes_partitus
ENSPEMG00000010463	Sf1	100	99.060	ENSSSCG00000013021	SF1	100	99.060	Sus_scrofa
ENSPEMG00000010463	Sf1	84	62.983	ENSTNIG00000004820	sf1	80	70.023	Tetraodon_nigroviridis
ENSPEMG00000010463	Sf1	72	92.358	ENSTBEG00000013133	SF1	67	91.757	Tupaia_belangeri
ENSPEMG00000010463	Sf1	81	95.174	ENSTTRG00000008857	SF1	96	95.543	Tursiops_truncatus
ENSPEMG00000010463	Sf1	75	96.674	ENSUAMG00000011977	SF1	95	94.165	Ursus_americanus
ENSPEMG00000010463	Sf1	99	88.421	ENSUMAG00000007268	SF1	90	99.076	Ursus_maritimus
ENSPEMG00000010463	Sf1	60	99.598	ENSVPAG00000011912	SF1	66	99.598	Vicugna_pacos
ENSPEMG00000010463	Sf1	83	99.055	ENSVVUG00000028585	SF1	97	99.055	Vulpes_vulpes
ENSPEMG00000010463	Sf1	93	68.689	ENSXETG00000008434	sf1	68	81.509	Xenopus_tropicalis
ENSPEMG00000010463	Sf1	64	85.753	ENSXCOG00000003704	sf1	75	81.188	Xiphophorus_couchianus
ENSPEMG00000010463	Sf1	65	83.905	ENSXMAG00000007822	sf1	61	79.665	Xiphophorus_maculatus