EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPEMG00000010531 (Gene tree)
Gene ID: 102920516
Gene Symbol: Scaf8
Alias: -
Full Name: SR-related CTD associated factor 8
Gene Type: protein_coding
Species: Peromyscus_maniculatus_bairdii
Status: putative
Strand: Minus strand
Length: 55375 bases
Position: chrKI615416.1:4851983-4907357
Accession: 102920516
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPEMP00000009153	RRM_1	PF00076.22	1.7e-08	1	1
ENSPEMP00000009159	RRM_1	PF00076.22	1.7e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPEMT00000013320	-	5097	XM_006978068	ENSPEMP00000009153	1259 (aa)	XP_006978130	-
ENSPEMT00000013326	-	3804	-	ENSPEMP00000009159	1267 (aa)	-	-

Gene Model

Click here to download ENSPEMG00000010531's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPEMG00000010531's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPEMG00000010531	Scaf8	100	92.155	ENSG00000213079	SCAF8	99	92.155	Homo_sapiens
ENSPEMG00000010531	Scaf8	88	67.139	ENSAPOG00000015527	SCAF8	76	67.021	Acanthochromis_polyacanthus
ENSPEMG00000010531	Scaf8	100	91.911	ENSAMEG00000007583	SCAF8	95	91.911	Ailuropoda_melanoleuca
ENSPEMG00000010531	Scaf8	86	69.269	ENSAOCG00000002421	SCAF8	76	67.301	Amphiprion_ocellaris
ENSPEMG00000010531	Scaf8	84	69.814	ENSATEG00000006959	SCAF8	96	69.374	Anabas_testudineus
ENSPEMG00000010531	Scaf8	100	77.116	ENSAPLG00000005765	SCAF8	99	77.116	Anas_platyrhynchos
ENSPEMG00000010531	Scaf8	100	73.961	ENSACAG00000005282	SCAF8	99	74.039	Anolis_carolinensis
ENSPEMG00000010531	Scaf8	100	92.076	ENSANAG00000036184	SCAF8	99	92.076	Aotus_nancymaae
ENSPEMG00000010531	Scaf8	82	72.546	ENSACLG00000018828	SCAF8	76	72.281	Astatotilapia_calliptera
ENSPEMG00000010531	Scaf8	100	91.190	ENSBTAG00000031917	SCAF8	99	91.190	Bos_taurus
ENSPEMG00000010531	Scaf8	100	91.918	ENSCJAG00000012631	SCAF8	94	91.918	Callithrix_jacchus
ENSPEMG00000010531	Scaf8	100	92.155	ENSCAFG00000000570	SCAF8	99	92.155	Canis_familiaris
ENSPEMG00000010531	Scaf8	100	92.155	ENSCAFG00020015048	SCAF8	98	92.155	Canis_lupus_dingo
ENSPEMG00000010531	Scaf8	100	90.873	ENSCHIG00000025041	SCAF8	99	90.873	Capra_hircus
ENSPEMG00000010531	Scaf8	100	91.838	ENSTSYG00000010991	SCAF8	97	91.838	Carlito_syrichta
ENSPEMG00000010531	Scaf8	66	96.983	ENSCAPG00000003300	SCAF8	86	96.930	Cavia_aperea
ENSPEMG00000010531	Scaf8	100	84.415	ENSCPOG00000022216	-	99	83.623	Cavia_porcellus
ENSPEMG00000010531	Scaf8	100	92.076	ENSCCAG00000024952	SCAF8	99	92.076	Cebus_capucinus
ENSPEMG00000010531	Scaf8	100	92.552	ENSCATG00000035361	SCAF8	99	92.552	Cercocebus_atys
ENSPEMG00000010531	Scaf8	100	92.216	ENSCLAG00000004910	SCAF8	100	92.216	Chinchilla_lanigera
ENSPEMG00000010531	Scaf8	100	92.631	ENSCSAG00000013430	SCAF8	98	92.631	Chlorocebus_sabaeus
ENSPEMG00000010531	Scaf8	100	73.501	ENSCPBG00000016330	SCAF8	99	72.874	Chrysemys_picta_bellii
ENSPEMG00000010531	Scaf8	100	92.314	ENSCANG00000039499	SCAF8	99	92.314	Colobus_angolensis_palliatus
ENSPEMG00000010531	Scaf8	100	97.855	ENSCGRG00001020167	Scaf8	99	97.855	Cricetulus_griseus_chok1gshd
ENSPEMG00000010531	Scaf8	100	97.855	ENSCGRG00000004120	Scaf8	99	97.855	Cricetulus_griseus_crigri
ENSPEMG00000010531	Scaf8	82	69.681	ENSCSEG00000000043	-	75	71.277	Cynoglossus_semilaevis
ENSPEMG00000010531	Scaf8	86	63.329	ENSCVAG00000000925	SCAF8	77	63.088	Cyprinodon_variegatus
ENSPEMG00000010531	Scaf8	97	86.464	ENSDNOG00000025271	SCAF8	100	90.074	Dasypus_novemcinctus
ENSPEMG00000010531	Scaf8	100	91.614	ENSDORG00000006391	Scaf8	99	91.693	Dipodomys_ordii
ENSPEMG00000010531	Scaf8	100	91.753	ENSEASG00005018879	SCAF8	99	91.680	Equus_asinus_asinus
ENSPEMG00000010531	Scaf8	100	91.832	ENSECAG00000005540	SCAF8	99	91.832	Equus_caballus
ENSPEMG00000010531	Scaf8	77	70.341	ENSELUG00000002779	SCAF8	72	69.594	Esox_lucius
ENSPEMG00000010531	Scaf8	100	92.308	ENSFCAG00000023424	SCAF8	99	92.308	Felis_catus
ENSPEMG00000010531	Scaf8	100	76.549	ENSFALG00000012433	SCAF8	99	76.646	Ficedula_albicollis
ENSPEMG00000010531	Scaf8	100	91.911	ENSFDAG00000010335	SCAF8	99	91.911	Fukomys_damarensis
ENSPEMG00000010531	Scaf8	89	70.822	ENSFHEG00000008284	SCAF8	77	70.822	Fundulus_heteroclitus
ENSPEMG00000010531	Scaf8	80	57.312	ENSGMOG00000018812	SCAF8	82	58.934	Gadus_morhua
ENSPEMG00000010531	Scaf8	100	77.743	ENSGALG00000013635	SCAF8	98	77.351	Gallus_gallus
ENSPEMG00000010531	Scaf8	57	55.670	ENSGAFG00000018033	SCAF8	77	63.420	Gambusia_affinis
ENSPEMG00000010531	Scaf8	93	53.560	ENSGACG00000006909	SCAF8	99	54.764	Gasterosteus_aculeatus
ENSPEMG00000010531	Scaf8	63	70.197	ENSGAGG00000017820	-	88	70.197	Gopherus_agassizii
ENSPEMG00000010531	Scaf8	100	92.076	ENSGGOG00000008645	SCAF8	99	92.076	Gorilla_gorilla
ENSPEMG00000010531	Scaf8	82	72.414	ENSHBUG00000019537	SCAF8	76	72.149	Haplochromis_burtoni
ENSPEMG00000010531	Scaf8	100	92.070	ENSHGLG00000003619	SCAF8	99	92.070	Heterocephalus_glaber_female
ENSPEMG00000010531	Scaf8	100	92.070	ENSHGLG00100004708	SCAF8	100	92.070	Heterocephalus_glaber_male
ENSPEMG00000010531	Scaf8	100	93.027	ENSSTOG00000026043	SCAF8	99	93.027	Ictidomys_tridecemlineatus
ENSPEMG00000010531	Scaf8	100	92.302	ENSJJAG00000020480	Scaf8	99	92.302	Jaculus_jaculus
ENSPEMG00000010531	Scaf8	92	66.311	ENSKMAG00000012767	SCAF8	77	66.192	Kryptolebias_marmoratus
ENSPEMG00000010531	Scaf8	60	76.296	ENSLBEG00000012484	-	63	76.429	Labrus_bergylta
ENSPEMG00000010531	Scaf8	88	75.368	ENSLACG00000001394	SCAF8	99	62.742	Latimeria_chalumnae
ENSPEMG00000010531	Scaf8	100	60.914	ENSLOCG00000016856	SCAF8	99	60.047	Lepisosteus_oculatus
ENSPEMG00000010531	Scaf8	100	90.427	ENSLAFG00000000022	SCAF8	99	90.981	Loxodonta_africana
ENSPEMG00000010531	Scaf8	100	92.631	ENSMFAG00000032738	SCAF8	99	92.631	Macaca_fascicularis
ENSPEMG00000010531	Scaf8	100	92.631	ENSMMUG00000015163	SCAF8	99	92.631	Macaca_mulatta
ENSPEMG00000010531	Scaf8	100	92.631	ENSMNEG00000043466	SCAF8	99	92.631	Macaca_nemestrina
ENSPEMG00000010531	Scaf8	100	92.631	ENSMLEG00000034845	SCAF8	99	92.631	Mandrillus_leucophaeus
ENSPEMG00000010531	Scaf8	84	64.796	ENSMAMG00000009457	SCAF8	76	64.158	Mastacembelus_armatus
ENSPEMG00000010531	Scaf8	82	72.414	ENSMZEG00005005698	SCAF8	76	72.149	Maylandia_zebra
ENSPEMG00000010531	Scaf8	100	77.344	ENSMGAG00000012762	SCAF8	99	77.109	Meleagris_gallopavo
ENSPEMG00000010531	Scaf8	100	97.061	ENSMAUG00000009513	Scaf8	100	97.061	Mesocricetus_auratus
ENSPEMG00000010531	Scaf8	100	91.528	ENSMICG00000028965	SCAF8	99	91.370	Microcebus_murinus
ENSPEMG00000010531	Scaf8	100	97.935	ENSMOCG00000014950	Scaf8	99	97.935	Microtus_ochrogaster
ENSPEMG00000010531	Scaf8	81	67.520	ENSMMOG00000002216	SCAF8	75	66.712	Mola_mola
ENSPEMG00000010531	Scaf8	100	84.956	ENSMODG00000008301	SCAF8	99	84.956	Monodelphis_domestica
ENSPEMG00000010531	Scaf8	82	71.164	ENSMALG00000011584	SCAF8	76	71.466	Monopterus_albus
ENSPEMG00000010531	Scaf8	100	95.711	MGP_CAROLIEiJ_G0021016	Scaf8	99	95.711	Mus_caroli
ENSPEMG00000010531	Scaf8	100	95.949	ENSMUSG00000046201	Scaf8	99	95.949	Mus_musculus
ENSPEMG00000010531	Scaf8	100	96.585	MGP_PahariEiJ_G0023334	Scaf8	99	96.585	Mus_pahari
ENSPEMG00000010531	Scaf8	100	91.990	ENSMPUG00000001974	SCAF8	98	91.990	Mustela_putorius_furo
ENSPEMG00000010531	Scaf8	100	91.277	ENSMLUG00000029190	SCAF8	99	91.277	Myotis_lucifugus
ENSPEMG00000010531	Scaf8	100	93.566	ENSNGAG00000012332	Scaf8	99	93.566	Nannospalax_galili
ENSPEMG00000010531	Scaf8	100	53.033	ENSNBRG00000009067	SCAF8	99	52.537	Neolamprologus_brichardi
ENSPEMG00000010531	Scaf8	100	90.751	ENSNLEG00000015509	SCAF8	99	90.751	Nomascus_leucogenys
ENSPEMG00000010531	Scaf8	70	91.071	ENSOPRG00000018413	-	76	91.919	Ochotona_princeps
ENSPEMG00000010531	Scaf8	100	91.442	ENSODEG00000007296	SCAF8	99	91.442	Octodon_degus
ENSPEMG00000010531	Scaf8	100	54.645	ENSONIG00000008119	SCAF8	99	54.261	Oreochromis_niloticus
ENSPEMG00000010531	Scaf8	100	93.423	ENSOCUG00000026063	SCAF8	99	93.423	Oryctolagus_cuniculus
ENSPEMG00000010531	Scaf8	93	55.795	ENSORLG00000017358	SCAF8	74	71.618	Oryzias_latipes
ENSPEMG00000010531	Scaf8	93	55.960	ENSORLG00020002214	SCAF8	74	71.751	Oryzias_latipes_hni
ENSPEMG00000010531	Scaf8	93	55.841	ENSORLG00015015779	SCAF8	74	71.883	Oryzias_latipes_hsok
ENSPEMG00000010531	Scaf8	82	71.618	ENSOMEG00000015471	SCAF8	74	71.883	Oryzias_melastigma
ENSPEMG00000010531	Scaf8	100	91.680	ENSOGAG00000034223	SCAF8	94	91.680	Otolemur_garnettii
ENSPEMG00000010531	Scaf8	100	90.794	ENSOARG00000004159	SCAF8	99	90.794	Ovis_aries
ENSPEMG00000010531	Scaf8	100	92.076	ENSPPAG00000039826	SCAF8	99	92.076	Pan_paniscus
ENSPEMG00000010531	Scaf8	100	92.308	ENSPPRG00000023175	SCAF8	99	92.308	Panthera_pardus
ENSPEMG00000010531	Scaf8	100	92.308	ENSPTIG00000014836	SCAF8	99	92.308	Panthera_tigris_altaica
ENSPEMG00000010531	Scaf8	100	92.155	ENSPTRG00000018727	SCAF8	99	92.155	Pan_troglodytes
ENSPEMG00000010531	Scaf8	100	92.472	ENSPANG00000017489	SCAF8	99	91.125	Papio_anubis
ENSPEMG00000010531	Scaf8	93	60.675	ENSPKIG00000021212	SCAF8	99	56.882	Paramormyrops_kingsleyae
ENSPEMG00000010531	Scaf8	89	70.102	ENSPSIG00000008614	SCAF8	94	75.573	Pelodiscus_sinensis
ENSPEMG00000010531	Scaf8	100	85.115	ENSPCIG00000001141	SCAF8	99	85.115	Phascolarctos_cinereus
ENSPEMG00000010531	Scaf8	53	53.528	ENSPFOG00000004176	SCAF8	99	53.956	Poecilia_formosa
ENSPEMG00000010531	Scaf8	89	65.545	ENSPLAG00000021432	SCAF8	77	65.313	Poecilia_latipinna
ENSPEMG00000010531	Scaf8	54	53.528	ENSPMEG00000007591	SCAF8	84	64.952	Poecilia_mexicana
ENSPEMG00000010531	Scaf8	88	66.429	ENSPREG00000000652	SCAF8	77	66.190	Poecilia_reticulata
ENSPEMG00000010531	Scaf8	100	90.823	ENSPPYG00000017121	SCAF8	99	90.506	Pongo_abelii
ENSPEMG00000010531	Scaf8	85	96.422	ENSPCAG00000013044	SCAF8	89	96.422	Procavia_capensis
ENSPEMG00000010531	Scaf8	100	92.320	ENSPCOG00000002067	SCAF8	99	92.162	Propithecus_coquereli
ENSPEMG00000010531	Scaf8	98	88.952	ENSPVAG00000005582	SCAF8	99	90.081	Pteropus_vampyrus
ENSPEMG00000010531	Scaf8	82	72.546	ENSPNYG00000007277	SCAF8	76	72.281	Pundamilia_nyererei
ENSPEMG00000010531	Scaf8	86	68.408	ENSPNAG00000024740	SCAF8	81	68.905	Pygocentrus_nattereri
ENSPEMG00000010531	Scaf8	100	96.585	ENSRNOG00000016919	Scaf8	99	96.585	Rattus_norvegicus
ENSPEMG00000010531	Scaf8	100	92.393	ENSRBIG00000035769	SCAF8	99	92.393	Rhinopithecus_bieti
ENSPEMG00000010531	Scaf8	100	92.314	ENSRROG00000013580	SCAF8	99	92.314	Rhinopithecus_roxellana
ENSPEMG00000010531	Scaf8	100	92.076	ENSSBOG00000027023	SCAF8	99	92.076	Saimiri_boliviensis_boliviensis
ENSPEMG00000010531	Scaf8	100	84.810	ENSSHAG00000009915	SCAF8	99	84.810	Sarcophilus_harrisii
ENSPEMG00000010531	Scaf8	93	56.555	ENSSFOG00015009481	SCAF8	94	66.237	Scleropages_formosus
ENSPEMG00000010531	Scaf8	86	68.362	ENSSMAG00000008275	SCAF8	76	71.258	Scophthalmus_maximus
ENSPEMG00000010531	Scaf8	100	75.988	ENSSPUG00000015219	SCAF8	99	75.988	Sphenodon_punctatus
ENSPEMG00000010531	Scaf8	100	91.673	ENSSSCG00000004070	SCAF8	100	91.573	Sus_scrofa
ENSPEMG00000010531	Scaf8	100	77.830	ENSTGUG00000011151	SCAF8	99	77.987	Taeniopygia_guttata
ENSPEMG00000010531	Scaf8	88	65.077	ENSTRUG00000009243	SCAF8	77	65.077	Takifugu_rubripes
ENSPEMG00000010531	Scaf8	93	63.529	ENSTNIG00000016885	SCAF8	99	54.470	Tetraodon_nigroviridis
ENSPEMG00000010531	Scaf8	100	90.880	ENSTTRG00000014538	SCAF8	100	90.880	Tursiops_truncatus
ENSPEMG00000010531	Scaf8	100	91.673	ENSUAMG00000024736	SCAF8	99	91.673	Ursus_americanus
ENSPEMG00000010531	Scaf8	99	91.653	ENSUMAG00000013404	SCAF8	100	91.653	Ursus_maritimus
ENSPEMG00000010531	Scaf8	68	82.654	ENSVPAG00000012465	SCAF8	99	81.494	Vicugna_pacos
ENSPEMG00000010531	Scaf8	100	92.228	ENSVVUG00000007532	SCAF8	100	92.135	Vulpes_vulpes
ENSPEMG00000010531	Scaf8	100	61.581	ENSXETG00000013132	scaf8	99	61.755	Xenopus_tropicalis
ENSPEMG00000010531	Scaf8	92	66.429	ENSXMAG00000019192	SCAF8	77	66.310	Xiphophorus_maculatus