EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPEMG00000010699 (Gene tree)
Gene ID: 102927388
Gene Symbol: Sf3b1
Alias: -
Full Name: splicing factor 3b subunit 1
Gene Type: protein_coding
Species: Peromyscus_maniculatus_bairdii
Status: putative
Strand: Minus strand
Length: 41345 bases
Position: chrKI615368.1:8430437-8471781
Accession: 102927388
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPEMP00000009368	SF3b1	PF08920.10	4.1e-47	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPEMT00000013536	-	4288	XM_015993707	ENSPEMP00000009368	1295 (aa)	XP_015849193	UPI000184C747

Gene Model

Click here to download ENSPEMG00000010699's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPEMG00000010699's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPEMG00000010699	Sf3b1	100	100.000	ENSG00000115524	SF3B1	99	100.000	Homo_sapiens
ENSPEMG00000010699	Sf3b1	100	93.578	ENSAPOG00000011894	sf3b1	99	93.578	Acanthochromis_polyacanthus
ENSPEMG00000010699	Sf3b1	100	99.923	ENSAMEG00000013809	SF3B1	99	99.923	Ailuropoda_melanoleuca
ENSPEMG00000010699	Sf3b1	100	93.170	ENSACIG00000020910	sf3b1	96	93.016	Amphilophus_citrinellus
ENSPEMG00000010699	Sf3b1	100	93.578	ENSAOCG00000004478	sf3b1	99	93.578	Amphiprion_ocellaris
ENSPEMG00000010699	Sf3b1	100	93.578	ENSAPEG00000012937	sf3b1	99	93.578	Amphiprion_percula
ENSPEMG00000010699	Sf3b1	100	93.650	ENSATEG00000020435	sf3b1	99	93.712	Anabas_testudineus
ENSPEMG00000010699	Sf3b1	100	99.382	ENSAPLG00000003993	SF3B1	99	99.382	Anas_platyrhynchos
ENSPEMG00000010699	Sf3b1	100	98.919	ENSACAG00000009612	SF3B1	99	98.919	Anolis_carolinensis
ENSPEMG00000010699	Sf3b1	100	100.000	ENSANAG00000021577	SF3B1	100	100.000	Aotus_nancymaae
ENSPEMG00000010699	Sf3b1	100	92.808	ENSACLG00000023470	sf3b1	99	92.655	Astatotilapia_calliptera
ENSPEMG00000010699	Sf3b1	100	94.109	ENSAMXG00000002219	sf3b1	99	93.956	Astyanax_mexicanus
ENSPEMG00000010699	Sf3b1	100	99.923	ENSBTAG00000008915	SF3B1	99	99.923	Bos_taurus
ENSPEMG00000010699	Sf3b1	99	66.440	WBGene00011605	sftb-1	98	66.516	Caenorhabditis_elegans
ENSPEMG00000010699	Sf3b1	100	100.000	ENSCJAG00000003902	SF3B1	99	100.000	Callithrix_jacchus
ENSPEMG00000010699	Sf3b1	100	100.000	ENSCAFG00000010826	SF3B1	99	100.000	Canis_familiaris
ENSPEMG00000010699	Sf3b1	100	100.000	ENSCAFG00020004750	SF3B1	99	100.000	Canis_lupus_dingo
ENSPEMG00000010699	Sf3b1	100	99.923	ENSCHIG00000015226	SF3B1	99	99.923	Capra_hircus
ENSPEMG00000010699	Sf3b1	100	99.923	ENSTSYG00000009214	SF3B1	99	99.923	Carlito_syrichta
ENSPEMG00000010699	Sf3b1	100	100.000	ENSCAPG00000006547	SF3B1	99	100.000	Cavia_aperea
ENSPEMG00000010699	Sf3b1	100	100.000	ENSCPOG00000009353	SF3B1	100	100.000	Cavia_porcellus
ENSPEMG00000010699	Sf3b1	100	100.000	ENSCCAG00000020506	SF3B1	99	100.000	Cebus_capucinus
ENSPEMG00000010699	Sf3b1	100	100.000	ENSCATG00000035735	SF3B1	99	100.000	Cercocebus_atys
ENSPEMG00000010699	Sf3b1	100	100.000	ENSCLAG00000014767	SF3B1	99	100.000	Chinchilla_lanigera
ENSPEMG00000010699	Sf3b1	100	100.000	ENSCSAG00000011505	SF3B1	99	100.000	Chlorocebus_sabaeus
ENSPEMG00000010699	Sf3b1	76	98.214	ENSCHOG00000009860	SF3B1	75	98.182	Choloepus_hoffmanni
ENSPEMG00000010699	Sf3b1	100	99.228	ENSCPBG00000021902	SF3B1	99	99.406	Chrysemys_picta_bellii
ENSPEMG00000010699	Sf3b1	69	78.060	ENSCING00000002558	-	99	78.771	Ciona_intestinalis
ENSPEMG00000010699	Sf3b1	100	80.061	ENSCSAVG00000002559	-	99	79.665	Ciona_savignyi
ENSPEMG00000010699	Sf3b1	100	100.000	ENSCANG00000029415	SF3B1	99	100.000	Colobus_angolensis_palliatus
ENSPEMG00000010699	Sf3b1	100	100.000	ENSCGRG00001016990	Sf3b1	99	100.000	Cricetulus_griseus_chok1gshd
ENSPEMG00000010699	Sf3b1	100	100.000	ENSCGRG00000005301	Sf3b1	99	100.000	Cricetulus_griseus_crigri
ENSPEMG00000010699	Sf3b1	100	90.023	ENSCSEG00000003860	sf3b1	99	89.946	Cynoglossus_semilaevis
ENSPEMG00000010699	Sf3b1	96	93.631	ENSCVAG00000003680	sf3b1	99	93.631	Cyprinodon_variegatus
ENSPEMG00000010699	Sf3b1	100	93.578	ENSDARG00000056138	sf3b1	99	93.502	Danio_rerio
ENSPEMG00000010699	Sf3b1	100	99.923	ENSDNOG00000011754	SF3B1	99	99.923	Dasypus_novemcinctus
ENSPEMG00000010699	Sf3b1	100	97.297	ENSDORG00000002399	Sf3b1	100	97.297	Dipodomys_ordii
ENSPEMG00000010699	Sf3b1	100	76.758	FBgn0031266	Sf3b1	99	76.758	Drosophila_melanogaster
ENSPEMG00000010699	Sf3b1	83	99.351	ENSETEG00000009188	SF3B1	100	99.351	Echinops_telfairi
ENSPEMG00000010699	Sf3b1	100	87.270	ENSEBUG00000004325	sf3b1	100	90.191	Eptatretus_burgeri
ENSPEMG00000010699	Sf3b1	100	99.923	ENSEASG00005020159	SF3B1	97	99.923	Equus_asinus_asinus
ENSPEMG00000010699	Sf3b1	100	99.923	ENSECAG00000021657	SF3B1	97	99.923	Equus_caballus
ENSPEMG00000010699	Sf3b1	87	100.000	ENSEEUG00000000836	SF3B1	81	100.000	Erinaceus_europaeus
ENSPEMG00000010699	Sf3b1	100	93.085	ENSELUG00000005977	sf3b1	97	92.933	Esox_lucius
ENSPEMG00000010699	Sf3b1	100	100.000	ENSFCAG00000005038	SF3B1	99	100.000	Felis_catus
ENSPEMG00000010699	Sf3b1	100	99.459	ENSFALG00000004281	SF3B1	99	99.459	Ficedula_albicollis
ENSPEMG00000010699	Sf3b1	100	100.000	ENSFDAG00000017510	SF3B1	99	100.000	Fukomys_damarensis
ENSPEMG00000010699	Sf3b1	100	92.890	ENSFHEG00000014333	sf3b1	99	92.890	Fundulus_heteroclitus
ENSPEMG00000010699	Sf3b1	100	93.487	ENSGMOG00000006773	sf3b1	99	93.487	Gadus_morhua
ENSPEMG00000010699	Sf3b1	100	99.382	ENSGALG00000008038	SF3B1	99	99.382	Gallus_gallus
ENSPEMG00000010699	Sf3b1	99	93.441	ENSGAFG00000000704	sf3b1	99	93.441	Gambusia_affinis
ENSPEMG00000010699	Sf3b1	100	93.630	ENSGACG00000008839	sf3b1	99	93.630	Gasterosteus_aculeatus
ENSPEMG00000010699	Sf3b1	100	99.228	ENSGAGG00000017478	SF3B1	99	99.228	Gopherus_agassizii
ENSPEMG00000010699	Sf3b1	100	93.170	ENSGGOG00000009264	SF3B1	99	94.231	Gorilla_gorilla
ENSPEMG00000010699	Sf3b1	99	92.874	ENSHBUG00000007705	sf3b1	99	92.720	Haplochromis_burtoni
ENSPEMG00000010699	Sf3b1	100	100.000	ENSHGLG00000008285	-	99	100.000	Heterocephalus_glaber_female
ENSPEMG00000010699	Sf3b1	100	97.992	ENSHGLG00100005535	-	99	97.992	Heterocephalus_glaber_male
ENSPEMG00000010699	Sf3b1	100	93.004	ENSHCOG00000016775	sf3b1	99	92.852	Hippocampus_comes
ENSPEMG00000010699	Sf3b1	100	93.956	ENSIPUG00000013171	sf3b1	99	93.956	Ictalurus_punctatus
ENSPEMG00000010699	Sf3b1	100	100.000	ENSSTOG00000011034	SF3B1	99	100.000	Ictidomys_tridecemlineatus
ENSPEMG00000010699	Sf3b1	99	99.922	ENSJJAG00000010903	Sf3b1	99	99.922	Jaculus_jaculus
ENSPEMG00000010699	Sf3b1	100	93.059	ENSKMAG00000004009	sf3b1	99	92.982	Kryptolebias_marmoratus
ENSPEMG00000010699	Sf3b1	100	93.543	ENSLBEG00000022208	sf3b1	99	93.390	Labrus_bergylta
ENSPEMG00000010699	Sf3b1	99	92.490	ENSLACG00000014832	SF3B1	99	92.490	Latimeria_chalumnae
ENSPEMG00000010699	Sf3b1	100	94.882	ENSLOCG00000003899	sf3b1	99	94.729	Lepisosteus_oculatus
ENSPEMG00000010699	Sf3b1	100	100.000	ENSLAFG00000001956	SF3B1	99	100.000	Loxodonta_africana
ENSPEMG00000010699	Sf3b1	100	100.000	ENSMMUG00000022430	SF3B1	99	100.000	Macaca_mulatta
ENSPEMG00000010699	Sf3b1	100	100.000	ENSMNEG00000042333	SF3B1	100	100.000	Macaca_nemestrina
ENSPEMG00000010699	Sf3b1	96	93.478	ENSMLEG00000026141	SF3B1	99	94.027	Mandrillus_leucophaeus
ENSPEMG00000010699	Sf3b1	100	93.573	ENSMAMG00000010241	sf3b1	99	93.573	Mastacembelus_armatus
ENSPEMG00000010699	Sf3b1	100	92.808	ENSMZEG00005021254	sf3b1	99	92.655	Maylandia_zebra
ENSPEMG00000010699	Sf3b1	100	98.764	ENSMGAG00000007017	SF3B1	99	98.764	Meleagris_gallopavo
ENSPEMG00000010699	Sf3b1	100	95.753	ENSMAUG00000009071	Sf3b1	99	95.753	Mesocricetus_auratus
ENSPEMG00000010699	Sf3b1	100	99.923	ENSMICG00000013879	SF3B1	99	99.923	Microcebus_murinus
ENSPEMG00000010699	Sf3b1	100	95.598	ENSMOCG00000000455	Sf3b1	99	95.598	Microtus_ochrogaster
ENSPEMG00000010699	Sf3b1	83	93.094	ENSMMOG00000000475	sf3b1	99	93.094	Mola_mola
ENSPEMG00000010699	Sf3b1	100	99.305	ENSMODG00000012275	SF3B1	99	99.305	Monodelphis_domestica
ENSPEMG00000010699	Sf3b1	100	93.497	ENSMALG00000017211	sf3b1	99	93.497	Monopterus_albus
ENSPEMG00000010699	Sf3b1	100	100.000	MGP_CAROLIEiJ_G0014141	Sf3b1	99	100.000	Mus_caroli
ENSPEMG00000010699	Sf3b1	100	100.000	ENSMUSG00000025982	Sf3b1	99	100.000	Mus_musculus
ENSPEMG00000010699	Sf3b1	100	100.000	MGP_SPRETEiJ_G0014947	Sf3b1	99	100.000	Mus_spretus
ENSPEMG00000010699	Sf3b1	100	100.000	ENSMPUG00000007799	SF3B1	99	100.000	Mustela_putorius_furo
ENSPEMG00000010699	Sf3b1	100	98.764	ENSMLUG00000000840	SF3B1	99	98.764	Myotis_lucifugus
ENSPEMG00000010699	Sf3b1	99	100.000	ENSNGAG00000021884	-	99	100.000	Nannospalax_galili
ENSPEMG00000010699	Sf3b1	100	89.034	ENSNBRG00000015816	sf3b1	99	89.034	Neolamprologus_brichardi
ENSPEMG00000010699	Sf3b1	100	100.000	ENSNLEG00000006861	SF3B1	99	100.000	Nomascus_leucogenys
ENSPEMG00000010699	Sf3b1	70	100.000	ENSMEUG00000015848	-	67	100.000	Notamacropus_eugenii
ENSPEMG00000010699	Sf3b1	100	88.031	ENSOPRG00000008596	SF3B1	99	88.031	Ochotona_princeps
ENSPEMG00000010699	Sf3b1	100	100.000	ENSODEG00000011153	-	99	100.000	Octodon_degus
ENSPEMG00000010699	Sf3b1	100	92.808	ENSONIG00000013758	sf3b1	99	92.655	Oreochromis_niloticus
ENSPEMG00000010699	Sf3b1	84	98.985	ENSOCUG00000012722	-	96	98.985	Oryctolagus_cuniculus
ENSPEMG00000010699	Sf3b1	100	93.344	ENSORLG00000020219	sf3b1	99	93.344	Oryzias_latipes
ENSPEMG00000010699	Sf3b1	100	93.344	ENSORLG00020001746	sf3b1	99	93.344	Oryzias_latipes_hni
ENSPEMG00000010699	Sf3b1	64	90.854	ENSORLG00015001759	sf3b1	97	90.854	Oryzias_latipes_hsok
ENSPEMG00000010699	Sf3b1	100	93.349	ENSOMEG00000019231	sf3b1	99	93.349	Oryzias_melastigma
ENSPEMG00000010699	Sf3b1	100	99.923	ENSOARG00000015374	SF3B1	99	99.923	Ovis_aries
ENSPEMG00000010699	Sf3b1	100	100.000	ENSPPAG00000035007	SF3B1	99	100.000	Pan_paniscus
ENSPEMG00000010699	Sf3b1	100	100.000	ENSPPRG00000009090	SF3B1	99	100.000	Panthera_pardus
ENSPEMG00000010699	Sf3b1	100	100.000	ENSPTIG00000021557	SF3B1	99	100.000	Panthera_tigris_altaica
ENSPEMG00000010699	Sf3b1	100	91.455	ENSPTRG00000012771	SF3B1	99	91.455	Pan_troglodytes
ENSPEMG00000010699	Sf3b1	100	100.000	ENSPANG00000013417	SF3B1	99	100.000	Papio_anubis
ENSPEMG00000010699	Sf3b1	100	95.019	ENSPKIG00000000784	sf3b1	99	94.866	Paramormyrops_kingsleyae
ENSPEMG00000010699	Sf3b1	99	97.991	ENSPSIG00000017222	SF3B1	98	97.991	Pelodiscus_sinensis
ENSPEMG00000010699	Sf3b1	90	93.973	ENSPMGG00000004330	sf3b1	98	93.803	Periophthalmus_magnuspinnatus
ENSPEMG00000010699	Sf3b1	100	90.214	ENSPMAG00000001311	sf3b1	99	90.367	Petromyzon_marinus
ENSPEMG00000010699	Sf3b1	100	99.228	ENSPCIG00000010642	SF3B1	99	99.228	Phascolarctos_cinereus
ENSPEMG00000010699	Sf3b1	100	93.277	ENSPFOG00000000073	sf3b1	99	93.277	Poecilia_formosa
ENSPEMG00000010699	Sf3b1	100	93.349	ENSPLAG00000002293	sf3b1	99	93.349	Poecilia_latipinna
ENSPEMG00000010699	Sf3b1	100	93.349	ENSPMEG00000000446	sf3b1	97	93.349	Poecilia_mexicana
ENSPEMG00000010699	Sf3b1	100	93.425	ENSPREG00000019652	sf3b1	99	93.425	Poecilia_reticulata
ENSPEMG00000010699	Sf3b1	100	98.814	ENSPPYG00000013044	SF3B1	96	98.814	Pongo_abelii
ENSPEMG00000010699	Sf3b1	100	99.846	ENSPCAG00000009292	SF3B1	99	99.846	Procavia_capensis
ENSPEMG00000010699	Sf3b1	100	99.923	ENSPCOG00000024074	SF3B1	99	99.923	Propithecus_coquereli
ENSPEMG00000010699	Sf3b1	100	100.000	ENSPVAG00000008302	SF3B1	99	100.000	Pteropus_vampyrus
ENSPEMG00000010699	Sf3b1	100	92.808	ENSPNYG00000014939	sf3b1	99	92.655	Pundamilia_nyererei
ENSPEMG00000010699	Sf3b1	100	93.956	ENSPNAG00000008288	sf3b1	99	93.956	Pygocentrus_nattereri
ENSPEMG00000010699	Sf3b1	100	100.000	ENSRNOG00000013516	Sf3b1	99	100.000	Rattus_norvegicus
ENSPEMG00000010699	Sf3b1	100	96.448	ENSRBIG00000026096	SF3B1	99	96.448	Rhinopithecus_bieti
ENSPEMG00000010699	Sf3b1	100	100.000	ENSRROG00000031308	SF3B1	99	100.000	Rhinopithecus_roxellana
ENSPEMG00000010699	Sf3b1	100	100.000	ENSSBOG00000020080	SF3B1	99	100.000	Saimiri_boliviensis_boliviensis
ENSPEMG00000010699	Sf3b1	100	99.305	ENSSHAG00000017564	SF3B1	99	99.305	Sarcophilus_harrisii
ENSPEMG00000010699	Sf3b1	100	94.572	ENSSFOG00015021535	sf3b1	99	94.725	Scleropages_formosus
ENSPEMG00000010699	Sf3b1	99	92.906	ENSSMAG00000013977	sf3b1	98	92.754	Scophthalmus_maximus
ENSPEMG00000010699	Sf3b1	100	93.344	ENSSDUG00000017422	sf3b1	99	93.344	Seriola_dumerili
ENSPEMG00000010699	Sf3b1	100	93.267	ENSSLDG00000019495	sf3b1	99	93.267	Seriola_lalandi_dorsalis
ENSPEMG00000010699	Sf3b1	77	100.000	ENSSARG00000007016	SF3B1	76	100.000	Sorex_araneus
ENSPEMG00000010699	Sf3b1	100	99.073	ENSSPUG00000000410	SF3B1	99	99.073	Sphenodon_punctatus
ENSPEMG00000010699	Sf3b1	100	93.650	ENSSPAG00000010451	sf3b1	98	93.650	Stegastes_partitus
ENSPEMG00000010699	Sf3b1	91	99.576	ENSSSCG00000016075	SF3B1	100	100.000	Sus_scrofa
ENSPEMG00000010699	Sf3b1	100	99.305	ENSTGUG00000010553	SF3B1	99	99.305	Taeniopygia_guttata
ENSPEMG00000010699	Sf3b1	100	93.420	ENSTRUG00000015534	sf3b1	99	93.267	Takifugu_rubripes
ENSPEMG00000010699	Sf3b1	88	100.000	ENSTBEG00000008714	SF3B1	92	100.000	Tupaia_belangeri
ENSPEMG00000010699	Sf3b1	92	94.185	ENSTTRG00000003414	SF3B1	92	94.185	Tursiops_truncatus
ENSPEMG00000010699	Sf3b1	94	95.847	ENSUAMG00000018506	SF3B1	99	99.190	Ursus_americanus
ENSPEMG00000010699	Sf3b1	100	100.000	ENSUMAG00000020945	SF3B1	99	100.000	Ursus_maritimus
ENSPEMG00000010699	Sf3b1	100	91.815	ENSVPAG00000005798	SF3B1	99	91.815	Vicugna_pacos
ENSPEMG00000010699	Sf3b1	100	100.000	ENSVVUG00000025948	SF3B1	94	100.000	Vulpes_vulpes
ENSPEMG00000010699	Sf3b1	100	96.757	ENSXETG00000013339	sf3b1	99	96.757	Xenopus_tropicalis
ENSPEMG00000010699	Sf3b1	100	89.838	ENSXCOG00000018086	sf3b1	99	89.724	Xiphophorus_couchianus
ENSPEMG00000010699	Sf3b1	100	93.349	ENSXMAG00000007369	sf3b1	99	93.648	Xiphophorus_maculatus