EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPEMG00000011088 (Gene tree)
Gene ID: 102911360
Gene Symbol: Rbm47
Alias: -
Full Name: RNA binding motif protein 47
Gene Type: protein_coding
Species: Peromyscus_maniculatus_bairdii
Status: putative
Strand: Minus strand
Length: 33297 bases
Position: chrKI615363.1:6710479-6743775
Accession: 102911360
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPEMP00000009960	RRM_1	PF00076.22	2.8e-37	1	3
ENSPEMP00000009960	RRM_1	PF00076.22	2.8e-37	2	3
ENSPEMP00000009960	RRM_1	PF00076.22	2.8e-37	3	3
ENSPEMP00000009956	RRM_1	PF00076.22	4.6e-37	1	3
ENSPEMP00000009956	RRM_1	PF00076.22	4.6e-37	2	3
ENSPEMP00000009956	RRM_1	PF00076.22	4.6e-37	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPEMT00000014133	-	1572	-	ENSPEMP00000009960	523 (aa)	-	UPI00042AAF65
ENSPEMT00000014129	-	2468	XM_006974618	ENSPEMP00000009956	592 (aa)	XP_006974680	UPI00042AE9C6

Gene Model

Click here to download ENSPEMG00000011088's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPEMG00000011088's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPEMG00000011088	Rbm47	59	54.194	ENSPEMG00000021017	Syncrip	73	57.692
ENSPEMG00000011088	Rbm47	84	49.821	ENSPEMG00000015021	A1cf	76	56.000
ENSPEMG00000011088	Rbm47	61	71.609	ENSPEMG00000013899	Rbm46	67	71.609
ENSPEMG00000011088	Rbm47	59	55.484	ENSPEMG00000001783	-	71	45.714

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPEMG00000011088	Rbm47	100	94.286	ENSG00000163694	RBM47	100	95.853	Homo_sapiens
ENSPEMG00000011088	Rbm47	100	82.540	ENSAPOG00000011062	rbm47	100	81.481	Acanthochromis_polyacanthus
ENSPEMG00000011088	Rbm47	100	94.118	ENSAMEG00000009672	RBM47	100	94.286	Ailuropoda_melanoleuca
ENSPEMG00000011088	Rbm47	100	83.333	ENSACIG00000011531	rbm47	100	82.275	Amphilophus_citrinellus
ENSPEMG00000011088	Rbm47	100	82.540	ENSAOCG00000022245	rbm47	100	81.481	Amphiprion_ocellaris
ENSPEMG00000011088	Rbm47	100	82.540	ENSAPEG00000018304	rbm47	100	81.481	Amphiprion_percula
ENSPEMG00000011088	Rbm47	100	82.051	ENSATEG00000018400	rbm47	100	80.769	Anabas_testudineus
ENSPEMG00000011088	Rbm47	100	86.700	ENSAPLG00000013974	RBM47	100	86.364	Anas_platyrhynchos
ENSPEMG00000011088	Rbm47	100	85.025	ENSACAG00000011833	RBM47	100	84.193	Anolis_carolinensis
ENSPEMG00000011088	Rbm47	100	94.622	ENSANAG00000029440	RBM47	100	94.118	Aotus_nancymaae
ENSPEMG00000011088	Rbm47	100	81.959	ENSACLG00000016902	rbm47	100	80.928	Astatotilapia_calliptera
ENSPEMG00000011088	Rbm47	100	80.155	ENSAMXG00000021794	rbm47	100	79.897	Astyanax_mexicanus
ENSPEMG00000011088	Rbm47	100	95.126	ENSBTAG00000002356	RBM47	100	94.622	Bos_taurus
ENSPEMG00000011088	Rbm47	100	94.128	ENSCJAG00000019385	RBM47	100	93.960	Callithrix_jacchus
ENSPEMG00000011088	Rbm47	96	92.832	ENSCAFG00000015898	RBM47	100	91.275	Canis_familiaris
ENSPEMG00000011088	Rbm47	83	93.522	ENSCAFG00020010558	RBM47	94	91.549	Canis_lupus_dingo
ENSPEMG00000011088	Rbm47	100	95.126	ENSCHIG00000026214	RBM47	100	94.454	Capra_hircus
ENSPEMG00000011088	Rbm47	90	82.114	ENSTSYG00000033612	RBM47	93	87.168	Carlito_syrichta
ENSPEMG00000011088	Rbm47	100	86.074	ENSCAPG00000008426	RBM47	100	86.242	Cavia_aperea
ENSPEMG00000011088	Rbm47	100	94.681	ENSCPOG00000014100	RBM47	100	94.180	Cavia_porcellus
ENSPEMG00000011088	Rbm47	99	65.593	ENSCCAG00000024397	-	99	64.915	Cebus_capucinus
ENSPEMG00000011088	Rbm47	100	94.463	ENSCCAG00000030129	-	100	93.960	Cebus_capucinus
ENSPEMG00000011088	Rbm47	100	94.454	ENSCATG00000042064	RBM47	100	94.118	Cercocebus_atys
ENSPEMG00000011088	Rbm47	100	93.883	ENSCLAG00000001684	RBM47	100	93.038	Chinchilla_lanigera
ENSPEMG00000011088	Rbm47	100	94.454	ENSCSAG00000017060	RBM47	100	94.118	Chlorocebus_sabaeus
ENSPEMG00000011088	Rbm47	100	76.510	ENSCHOG00000011731	RBM47	88	88.090	Choloepus_hoffmanni
ENSPEMG00000011088	Rbm47	100	88.000	ENSCPBG00000013831	RBM47	100	87.833	Chrysemys_picta_bellii
ENSPEMG00000011088	Rbm47	100	94.622	ENSCANG00000019997	RBM47	100	94.118	Colobus_angolensis_palliatus
ENSPEMG00000011088	Rbm47	100	92.190	ENSCGRG00001020102	-	100	92.190	Cricetulus_griseus_chok1gshd
ENSPEMG00000011088	Rbm47	100	98.404	ENSCGRG00001000623	-	100	97.519	Cricetulus_griseus_chok1gshd
ENSPEMG00000011088	Rbm47	100	97.872	ENSCGRG00000007762	-	100	98.101	Cricetulus_griseus_crigri
ENSPEMG00000011088	Rbm47	100	91.619	ENSCGRG00000014760	-	100	91.619	Cricetulus_griseus_crigri
ENSPEMG00000011088	Rbm47	100	74.252	ENSCSEG00000004545	rbm47	100	80.423	Cynoglossus_semilaevis
ENSPEMG00000011088	Rbm47	96	84.225	ENSCVAG00000020144	rbm47	100	81.649	Cyprinodon_variegatus
ENSPEMG00000011088	Rbm47	100	75.738	ENSDARG00000061985	rbm47	100	78.987	Danio_rerio
ENSPEMG00000011088	Rbm47	100	92.256	ENSDNOG00000046854	RBM47	100	92.424	Dasypus_novemcinctus
ENSPEMG00000011088	Rbm47	100	93.144	ENSDORG00000010144	Rbm47	100	92.642	Dipodomys_ordii
ENSPEMG00000011088	Rbm47	100	92.475	ENSETEG00000009194	RBM47	100	92.475	Echinops_telfairi
ENSPEMG00000011088	Rbm47	95	58.935	ENSEBUG00000011912	rbm47	95	75.575	Eptatretus_burgeri
ENSPEMG00000011088	Rbm47	100	94.118	ENSEASG00005008443	RBM47	100	93.950	Equus_asinus_asinus
ENSPEMG00000011088	Rbm47	100	94.118	ENSECAG00000004400	RBM47	100	93.950	Equus_caballus
ENSPEMG00000011088	Rbm47	75	92.641	ENSEEUG00000001194	RBM47	75	93.506	Erinaceus_europaeus
ENSPEMG00000011088	Rbm47	100	80.253	ENSELUG00000006148	rbm47	100	79.345	Esox_lucius
ENSPEMG00000011088	Rbm47	100	94.622	ENSFCAG00000012399	RBM47	100	93.950	Felis_catus
ENSPEMG00000011088	Rbm47	100	88.442	ENSFALG00000002861	RBM47	100	88.107	Ficedula_albicollis
ENSPEMG00000011088	Rbm47	100	91.755	ENSFDAG00000016326	RBM47	100	90.268	Fukomys_damarensis
ENSPEMG00000011088	Rbm47	96	85.352	ENSFHEG00000007938	rbm47	100	73.500	Fundulus_heteroclitus
ENSPEMG00000011088	Rbm47	100	79.494	ENSGMOG00000014802	rbm47	100	78.481	Gadus_morhua
ENSPEMG00000011088	Rbm47	72	90.160	ENSGALG00000014267	RBM47	99	90.160	Gallus_gallus
ENSPEMG00000011088	Rbm47	72	82.447	ENSGAFG00000020571	rbm47	98	81.117	Gambusia_affinis
ENSPEMG00000011088	Rbm47	100	78.827	ENSGACG00000016223	rbm47	100	78.061	Gasterosteus_aculeatus
ENSPEMG00000011088	Rbm47	100	88.167	ENSGAGG00000020051	RBM47	100	88.000	Gopherus_agassizii
ENSPEMG00000011088	Rbm47	100	94.454	ENSGGOG00000001367	RBM47	100	94.118	Gorilla_gorilla
ENSPEMG00000011088	Rbm47	100	81.959	ENSHBUG00000003520	rbm47	100	80.928	Haplochromis_burtoni
ENSPEMG00000011088	Rbm47	100	73.333	ENSHGLG00000016914	RBM47	100	93.671	Heterocephalus_glaber_female
ENSPEMG00000011088	Rbm47	100	82.799	ENSHGLG00100003071	-	100	82.799	Heterocephalus_glaber_male
ENSPEMG00000011088	Rbm47	100	92.167	ENSHGLG00100014028	-	100	93.671	Heterocephalus_glaber_male
ENSPEMG00000011088	Rbm47	99	75.333	ENSHCOG00000002074	rbm47	99	81.481	Hippocampus_comes
ENSPEMG00000011088	Rbm47	100	79.639	ENSIPUG00000004743	rbm47	100	80.053	Ictalurus_punctatus
ENSPEMG00000011088	Rbm47	100	93.960	ENSSTOG00000004727	RBM47	100	94.304	Ictidomys_tridecemlineatus
ENSPEMG00000011088	Rbm47	100	93.109	ENSJJAG00000013823	Rbm47	100	93.782	Jaculus_jaculus
ENSPEMG00000011088	Rbm47	100	82.540	ENSKMAG00000000084	rbm47	100	81.217	Kryptolebias_marmoratus
ENSPEMG00000011088	Rbm47	100	81.316	ENSLBEG00000008436	rbm47	100	80.053	Labrus_bergylta
ENSPEMG00000011088	Rbm47	100	85.904	ENSLACG00000007196	RBM47	100	82.638	Latimeria_chalumnae
ENSPEMG00000011088	Rbm47	100	80.634	ENSLOCG00000012966	rbm47	95	79.132	Lepisosteus_oculatus
ENSPEMG00000011088	Rbm47	100	93.792	ENSLAFG00000011998	RBM47	100	92.785	Loxodonta_africana
ENSPEMG00000011088	Rbm47	100	94.454	ENSMFAG00000037967	RBM47	100	94.118	Macaca_fascicularis
ENSPEMG00000011088	Rbm47	100	94.454	ENSMMUG00000012036	RBM47	100	95.337	Macaca_mulatta
ENSPEMG00000011088	Rbm47	100	94.286	ENSMNEG00000040774	RBM47	100	94.454	Macaca_nemestrina
ENSPEMG00000011088	Rbm47	100	96.190	ENSMLEG00000041432	RBM47	100	96.190	Mandrillus_leucophaeus
ENSPEMG00000011088	Rbm47	100	82.005	ENSMAMG00000019143	rbm47	100	80.720	Mastacembelus_armatus
ENSPEMG00000011088	Rbm47	100	81.959	ENSMZEG00005023659	rbm47	100	80.928	Maylandia_zebra
ENSPEMG00000011088	Rbm47	100	88.167	ENSMGAG00000012226	RBM47	100	87.500	Meleagris_gallopavo
ENSPEMG00000011088	Rbm47	100	98.664	ENSMAUG00000006493	Rbm47	100	98.664	Mesocricetus_auratus
ENSPEMG00000011088	Rbm47	100	86.891	ENSMICG00000026417	RBM47	100	87.227	Microcebus_murinus
ENSPEMG00000011088	Rbm47	100	99.235	ENSMOCG00000021170	Rbm47	100	100.000	Microtus_ochrogaster
ENSPEMG00000011088	Rbm47	100	80.463	ENSMMOG00000007260	rbm47	100	79.434	Mola_mola
ENSPEMG00000011088	Rbm47	100	81.566	ENSMODG00000020561	-	100	80.336	Monodelphis_domestica
ENSPEMG00000011088	Rbm47	60	80.442	ENSMODG00000015426	-	99	77.918	Monodelphis_domestica
ENSPEMG00000011088	Rbm47	100	91.489	ENSMODG00000007003	RBM47	100	89.748	Monodelphis_domestica
ENSPEMG00000011088	Rbm47	100	81.915	ENSMALG00000005167	rbm47	100	82.181	Monopterus_albus
ENSPEMG00000011088	Rbm47	100	98.279	MGP_CAROLIEiJ_G0027258	Rbm47	100	98.279	Mus_caroli
ENSPEMG00000011088	Rbm47	100	98.279	ENSMUSG00000070780	Rbm47	100	98.279	Mus_musculus
ENSPEMG00000011088	Rbm47	100	98.662	MGP_PahariEiJ_G0017040	Rbm47	100	98.662	Mus_pahari
ENSPEMG00000011088	Rbm47	100	97.706	MGP_SPRETEiJ_G0028253	Rbm47	100	97.706	Mus_spretus
ENSPEMG00000011088	Rbm47	100	95.278	ENSMPUG00000006177	RBM47	94	94.941	Mustela_putorius_furo
ENSPEMG00000011088	Rbm47	100	91.092	ENSMLUG00000000889	RBM47	100	91.261	Myotis_lucifugus
ENSPEMG00000011088	Rbm47	100	94.098	ENSNGAG00000003325	Rbm47	100	94.098	Nannospalax_galili
ENSPEMG00000011088	Rbm47	100	82.216	ENSNBRG00000015092	rbm47	100	81.186	Neolamprologus_brichardi
ENSPEMG00000011088	Rbm47	100	94.118	ENSNLEG00000017151	RBM47	100	93.782	Nomascus_leucogenys
ENSPEMG00000011088	Rbm47	69	93.036	ENSMEUG00000009516	-	99	86.682	Notamacropus_eugenii
ENSPEMG00000011088	Rbm47	85	94.215	ENSOPRG00000016507	-	75	94.215	Ochotona_princeps
ENSPEMG00000011088	Rbm47	100	94.415	ENSODEG00000004873	RBM47	100	92.617	Octodon_degus
ENSPEMG00000011088	Rbm47	100	81.074	ENSONIG00000009061	rbm47	100	80.051	Oreochromis_niloticus
ENSPEMG00000011088	Rbm47	100	86.356	ENSOANG00000008978	RBM47	100	86.689	Ornithorhynchus_anatinus
ENSPEMG00000011088	Rbm47	100	93.121	ENSOCUG00000012034	RBM47	100	92.450	Oryctolagus_cuniculus
ENSPEMG00000011088	Rbm47	100	82.447	ENSORLG00000005847	rbm47	100	81.117	Oryzias_latipes
ENSPEMG00000011088	Rbm47	100	82.447	ENSORLG00020005154	rbm47	100	81.117	Oryzias_latipes_hni
ENSPEMG00000011088	Rbm47	100	82.713	ENSORLG00015000066	rbm47	100	81.383	Oryzias_latipes_hsok
ENSPEMG00000011088	Rbm47	100	82.713	ENSOMEG00000010730	rbm47	100	81.649	Oryzias_melastigma
ENSPEMG00000011088	Rbm47	100	95.278	ENSOGAG00000029367	-	100	94.941	Otolemur_garnettii
ENSPEMG00000011088	Rbm47	100	86.341	ENSOGAG00000025193	-	100	86.341	Otolemur_garnettii
ENSPEMG00000011088	Rbm47	100	88.000	ENSOARG00000012711	RBM47	100	86.891	Ovis_aries
ENSPEMG00000011088	Rbm47	100	94.286	ENSPPAG00000029763	RBM47	100	93.950	Pan_paniscus
ENSPEMG00000011088	Rbm47	100	91.261	ENSPPRG00000012873	RBM47	100	94.947	Panthera_pardus
ENSPEMG00000011088	Rbm47	85	91.468	ENSPTIG00000017046	RBM47	100	91.270	Panthera_tigris_altaica
ENSPEMG00000011088	Rbm47	100	94.454	ENSPTRG00000016006	RBM47	100	94.118	Pan_troglodytes
ENSPEMG00000011088	Rbm47	100	94.454	ENSPANG00000005980	RBM47	100	94.118	Papio_anubis
ENSPEMG00000011088	Rbm47	96	78.627	ENSPKIG00000013431	RBM47	98	79.949	Paramormyrops_kingsleyae
ENSPEMG00000011088	Rbm47	96	77.075	ENSPKIG00000005037	rbm47	100	79.793	Paramormyrops_kingsleyae
ENSPEMG00000011088	Rbm47	90	89.098	ENSPSIG00000017516	RBM47	97	88.910	Pelodiscus_sinensis
ENSPEMG00000011088	Rbm47	100	74.833	ENSPMGG00000018540	rbm47	100	81.915	Periophthalmus_magnuspinnatus
ENSPEMG00000011088	Rbm47	96	84.916	ENSPFOG00000007997	rbm47	100	78.228	Poecilia_formosa
ENSPEMG00000011088	Rbm47	96	84.637	ENSPLAG00000002072	rbm47	100	80.423	Poecilia_latipinna
ENSPEMG00000011088	Rbm47	100	82.447	ENSPMEG00000017492	rbm47	100	81.117	Poecilia_mexicana
ENSPEMG00000011088	Rbm47	96	85.634	ENSPREG00000008456	rbm47	100	80.688	Poecilia_reticulata
ENSPEMG00000011088	Rbm47	98	82.385	ENSPPYG00000014688	RBM47	100	80.743	Pongo_abelii
ENSPEMG00000011088	Rbm47	88	94.256	ENSPCAG00000011879	RBM47	81	95.262	Procavia_capensis
ENSPEMG00000011088	Rbm47	100	90.894	ENSPCOG00000023451	RBM47	100	90.894	Propithecus_coquereli
ENSPEMG00000011088	Rbm47	100	93.289	ENSPVAG00000003812	RBM47	100	93.456	Pteropus_vampyrus
ENSPEMG00000011088	Rbm47	100	81.959	ENSPNYG00000022868	rbm47	100	80.928	Pundamilia_nyererei
ENSPEMG00000011088	Rbm47	100	75.041	ENSPNAG00000007940	rbm47	100	80.412	Pygocentrus_nattereri
ENSPEMG00000011088	Rbm47	100	98.480	ENSRNOG00000002408	Rbm47	100	98.480	Rattus_norvegicus
ENSPEMG00000011088	Rbm47	100	94.790	ENSRBIG00000039601	RBM47	100	94.286	Rhinopithecus_bieti
ENSPEMG00000011088	Rbm47	100	94.790	ENSRROG00000044696	RBM47	100	94.286	Rhinopithecus_roxellana
ENSPEMG00000011088	Rbm47	100	89.916	ENSSBOG00000028475	RBM47	100	95.052	Saimiri_boliviensis_boliviensis
ENSPEMG00000011088	Rbm47	100	91.223	ENSSHAG00000017576	RBM47	100	89.748	Sarcophilus_harrisii
ENSPEMG00000011088	Rbm47	100	73.544	ENSSFOG00015024101	RBM47	100	72.213	Scleropages_formosus
ENSPEMG00000011088	Rbm47	100	73.267	ENSSFOG00015012445	rbm47	100	76.904	Scleropages_formosus
ENSPEMG00000011088	Rbm47	100	80.000	ENSSMAG00000009744	rbm47	100	78.462	Scophthalmus_maximus
ENSPEMG00000011088	Rbm47	100	83.245	ENSSDUG00000022684	rbm47	100	81.915	Seriola_dumerili
ENSPEMG00000011088	Rbm47	100	79.545	ENSSLDG00000003109	rbm47	100	82.181	Seriola_lalandi_dorsalis
ENSPEMG00000011088	Rbm47	84	93.304	ENSSARG00000001735	RBM47	75	93.527	Sorex_araneus
ENSPEMG00000011088	Rbm47	100	85.476	ENSSPUG00000007515	RBM47	100	87.831	Sphenodon_punctatus
ENSPEMG00000011088	Rbm47	100	83.598	ENSSPAG00000001257	rbm47	100	82.275	Stegastes_partitus
ENSPEMG00000011088	Rbm47	100	94.958	ENSSSCG00000008796	RBM47	100	94.118	Sus_scrofa
ENSPEMG00000011088	Rbm47	100	88.275	ENSTGUG00000008705	RBM47	100	87.940	Taeniopygia_guttata
ENSPEMG00000011088	Rbm47	100	75.333	ENSTRUG00000014050	rbm47	100	81.117	Takifugu_rubripes
ENSPEMG00000011088	Rbm47	100	80.720	ENSTNIG00000006127	rbm47	100	79.177	Tetraodon_nigroviridis
ENSPEMG00000011088	Rbm47	86	94.737	ENSTBEG00000001607	RBM47	76	94.737	Tupaia_belangeri
ENSPEMG00000011088	Rbm47	100	93.761	ENSTTRG00000002839	RBM47	100	94.098	Tursiops_truncatus
ENSPEMG00000011088	Rbm47	100	94.941	ENSUAMG00000021346	RBM47	100	94.604	Ursus_americanus
ENSPEMG00000011088	Rbm47	57	95.205	ENSVPAG00000000641	-	57	95.205	Vicugna_pacos
ENSPEMG00000011088	Rbm47	96	93.706	ENSVVUG00000014774	RBM47	100	91.443	Vulpes_vulpes
ENSPEMG00000011088	Rbm47	100	83.697	ENSXETG00000012802	rbm47	100	83.697	Xenopus_tropicalis
ENSPEMG00000011088	Rbm47	100	75.283	ENSXCOG00000000780	rbm47	100	80.688	Xiphophorus_couchianus
ENSPEMG00000011088	Rbm47	100	82.447	ENSXMAG00000009874	rbm47	100	81.117	Xiphophorus_maculatus