EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPEMG00000011156 (Gene tree)
Gene ID: 102907327
Gene Symbol: Trub1
Alias: -
Full Name: TruB pseudouridine synthase family member 1
Gene Type: protein_coding
Species: Peromyscus_maniculatus_bairdii
Status: putative
Strand: Plus strand
Length: 57659 bases
Position: chrKI615419.1:2814477-2872135
Accession: 102907327
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPEMP00000010051	TruB_N	PF01509.18	1.9e-49	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPEMT00000014225	-	1796	XM_006978448	ENSPEMP00000010051	340 (aa)	XP_006978510	UPI00042AACF9

Gene Model

Click here to download ENSPEMG00000011156's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPEMG00000011156's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPEMG00000011156	Trub1	99	78.223	ENSG00000165832	TRUB1	86	85.333	Homo_sapiens
ENSPEMG00000011156	Trub1	72	68.571	ENSAPOG00000020565	trub1	91	67.331	Acanthochromis_polyacanthus
ENSPEMG00000011156	Trub1	88	84.768	ENSAMEG00000014931	TRUB1	99	79.202	Ailuropoda_melanoleuca
ENSPEMG00000011156	Trub1	72	63.008	ENSACIG00000003060	trub1	82	63.008	Amphilophus_citrinellus
ENSPEMG00000011156	Trub1	72	68.571	ENSAOCG00000017188	trub1	99	63.406	Amphiprion_ocellaris
ENSPEMG00000011156	Trub1	72	68.699	ENSAPEG00000015209	trub1	94	66.284	Amphiprion_percula
ENSPEMG00000011156	Trub1	71	68.595	ENSATEG00000023291	trub1	87	68.595	Anabas_testudineus
ENSPEMG00000011156	Trub1	80	75.735	ENSAPLG00000006808	TRUB1	99	75.273	Anas_platyrhynchos
ENSPEMG00000011156	Trub1	80	69.742	ENSACAG00000009282	TRUB1	98	69.742	Anolis_carolinensis
ENSPEMG00000011156	Trub1	88	85.953	ENSANAG00000022870	TRUB1	85	85.953	Aotus_nancymaae
ENSPEMG00000011156	Trub1	79	64.419	ENSACLG00000000823	trub1	96	64.419	Astatotilapia_calliptera
ENSPEMG00000011156	Trub1	81	62.545	ENSAMXG00000015845	trub1	92	62.545	Astyanax_mexicanus
ENSPEMG00000011156	Trub1	89	83.721	ENSBTAG00000012955	TRUB1	86	83.721	Bos_taurus
ENSPEMG00000011156	Trub1	88	86.000	ENSCJAG00000047815	TRUB1	85	86.000	Callithrix_jacchus
ENSPEMG00000011156	Trub1	87	86.486	ENSCAFG00000011688	TRUB1	86	85.667	Canis_familiaris
ENSPEMG00000011156	Trub1	88	85.667	ENSCAFG00020013237	TRUB1	86	85.667	Canis_lupus_dingo
ENSPEMG00000011156	Trub1	89	84.385	ENSCHIG00000020884	TRUB1	90	84.385	Capra_hircus
ENSPEMG00000011156	Trub1	88	85.333	ENSTSYG00000000446	TRUB1	85	85.333	Carlito_syrichta
ENSPEMG00000011156	Trub1	74	74.308	ENSCAPG00000017088	TRUB1	99	74.308	Cavia_aperea
ENSPEMG00000011156	Trub1	69	74.180	ENSCPOG00000040236	-	80	84.694	Cavia_porcellus
ENSPEMG00000011156	Trub1	70	75.519	ENSCPOG00000030129	-	76	86.154	Cavia_porcellus
ENSPEMG00000011156	Trub1	88	85.333	ENSCCAG00000028842	TRUB1	85	85.333	Cebus_capucinus
ENSPEMG00000011156	Trub1	99	77.937	ENSCATG00000033431	TRUB1	86	85.667	Cercocebus_atys
ENSPEMG00000011156	Trub1	69	74.590	ENSCLAG00000008664	TRUB1	80	86.224	Chinchilla_lanigera
ENSPEMG00000011156	Trub1	88	85.906	ENSCSAG00000004891	TRUB1	86	85.667	Chlorocebus_sabaeus
ENSPEMG00000011156	Trub1	86	71.088	ENSCHOG00000011931	TRUB1	84	70.946	Choloepus_hoffmanni
ENSPEMG00000011156	Trub1	80	76.838	ENSCPBG00000003051	TRUB1	94	76.838	Chrysemys_picta_bellii
ENSPEMG00000011156	Trub1	99	77.937	ENSCANG00000029445	TRUB1	86	85.667	Colobus_angolensis_palliatus
ENSPEMG00000011156	Trub1	75	92.157	ENSCGRG00001016772	-	100	77.059	Cricetulus_griseus_chok1gshd
ENSPEMG00000011156	Trub1	83	82.918	ENSCGRG00001010322	-	86	75.588	Cricetulus_griseus_chok1gshd
ENSPEMG00000011156	Trub1	83	92.883	ENSCGRG00000010806	Trub1	100	84.706	Cricetulus_griseus_crigri
ENSPEMG00000011156	Trub1	75	62.891	ENSCSEG00000011261	trub1	97	57.143	Cynoglossus_semilaevis
ENSPEMG00000011156	Trub1	76	67.308	ENSCVAG00000008791	trub1	79	67.308	Cyprinodon_variegatus
ENSPEMG00000011156	Trub1	78	64.015	ENSDARG00000053805	trub1	91	64.015	Danio_rerio
ENSPEMG00000011156	Trub1	96	76.205	ENSDNOG00000001069	TRUB1	84	82.034	Dasypus_novemcinctus
ENSPEMG00000011156	Trub1	98	78.994	ENSDORG00000010431	Trub1	87	85.714	Dipodomys_ordii
ENSPEMG00000011156	Trub1	66	85.915	ENSETEG00000009183	TRUB1	65	83.784	Echinops_telfairi
ENSPEMG00000011156	Trub1	88	84.615	ENSEASG00005014739	TRUB1	100	78.286	Equus_asinus_asinus
ENSPEMG00000011156	Trub1	88	84.615	ENSECAG00000007177	TRUB1	100	78.286	Equus_caballus
ENSPEMG00000011156	Trub1	86	73.129	ENSEEUG00000013993	TRUB1	84	71.947	Erinaceus_europaeus
ENSPEMG00000011156	Trub1	72	69.388	ENSELUG00000000502	trub1	86	69.388	Esox_lucius
ENSPEMG00000011156	Trub1	88	85.619	ENSFCAG00000031927	TRUB1	99	78.386	Felis_catus
ENSPEMG00000011156	Trub1	70	75.210	ENSFALG00000002232	TRUB1	91	75.210	Ficedula_albicollis
ENSPEMG00000011156	Trub1	69	77.459	ENSFDAG00000008140	TRUB1	81	87.374	Fukomys_damarensis
ENSPEMG00000011156	Trub1	80	62.362	ENSFHEG00000004016	trub1	92	62.362	Fundulus_heteroclitus
ENSPEMG00000011156	Trub1	80	74.265	ENSGALG00000009091	TRUB1	96	74.265	Gallus_gallus
ENSPEMG00000011156	Trub1	70	65.417	ENSGAFG00000009193	trub1	84	65.417	Gambusia_affinis
ENSPEMG00000011156	Trub1	59	67.337	ENSGACG00000015387	trub1	98	67.337	Gasterosteus_aculeatus
ENSPEMG00000011156	Trub1	84	74.296	ENSGAGG00000009758	TRUB1	81	74.296	Gopherus_agassizii
ENSPEMG00000011156	Trub1	88	85.333	ENSGGOG00000004583	TRUB1	86	85.333	Gorilla_gorilla
ENSPEMG00000011156	Trub1	74	67.063	ENSHBUG00000016787	trub1	91	67.063	Haplochromis_burtoni
ENSPEMG00000011156	Trub1	100	74.499	ENSHGLG00000015314	TRUB1	86	81.395	Heterocephalus_glaber_female
ENSPEMG00000011156	Trub1	57	86.598	ENSHGLG00100009183	TRUB1	83	86.224	Heterocephalus_glaber_male
ENSPEMG00000011156	Trub1	72	67.755	ENSHCOG00000017877	trub1	93	66.016	Hippocampus_comes
ENSPEMG00000011156	Trub1	75	68.235	ENSIPUG00000017559	trub1	89	68.235	Ictalurus_punctatus
ENSPEMG00000011156	Trub1	89	84.053	ENSSTOG00000003641	TRUB1	100	78.947	Ictidomys_tridecemlineatus
ENSPEMG00000011156	Trub1	88	84.899	ENSJJAG00000011800	Trub1	100	78.363	Jaculus_jaculus
ENSPEMG00000011156	Trub1	74	66.148	ENSKMAG00000006232	trub1	92	66.148	Kryptolebias_marmoratus
ENSPEMG00000011156	Trub1	76	65.283	ENSLBEG00000026722	trub1	93	65.283	Labrus_bergylta
ENSPEMG00000011156	Trub1	81	71.168	ENSLACG00000014885	TRUB1	92	71.168	Latimeria_chalumnae
ENSPEMG00000011156	Trub1	80	69.118	ENSLOCG00000012979	trub1	92	69.118	Lepisosteus_oculatus
ENSPEMG00000011156	Trub1	86	80.000	ENSLAFG00000015452	TRUB1	88	78.641	Loxodonta_africana
ENSPEMG00000011156	Trub1	88	85.906	ENSMFAG00000031767	TRUB1	86	85.667	Macaca_fascicularis
ENSPEMG00000011156	Trub1	88	85.906	ENSMMUG00000001902	TRUB1	86	85.667	Macaca_mulatta
ENSPEMG00000011156	Trub1	88	81.208	ENSMNEG00000044646	TRUB1	85	81.000	Macaca_nemestrina
ENSPEMG00000011156	Trub1	99	78.223	ENSMLEG00000042655	TRUB1	86	85.667	Mandrillus_leucophaeus
ENSPEMG00000011156	Trub1	79	64.419	ENSMZEG00005024095	trub1	96	64.419	Maylandia_zebra
ENSPEMG00000011156	Trub1	80	74.265	ENSMGAG00000011135	TRUB1	93	74.265	Meleagris_gallopavo
ENSPEMG00000011156	Trub1	100	86.176	ENSMAUG00000011101	Trub1	100	85.588	Mesocricetus_auratus
ENSPEMG00000011156	Trub1	89	85.382	ENSMICG00000016324	TRUB1	86	85.382	Microcebus_murinus
ENSPEMG00000011156	Trub1	100	86.176	ENSMOCG00000017759	Trub1	100	86.176	Microtus_ochrogaster
ENSPEMG00000011156	Trub1	79	81.481	ENSMODG00000009676	TRUB1	77	80.000	Monodelphis_domestica
ENSPEMG00000011156	Trub1	100	82.647	MGP_CAROLIEiJ_G0023100	Trub1	100	81.765	Mus_caroli
ENSPEMG00000011156	Trub1	100	82.059	ENSMUSG00000025086	Trub1	100	81.176	Mus_musculus
ENSPEMG00000011156	Trub1	100	82.353	MGP_PahariEiJ_G0014588	Trub1	100	81.471	Mus_pahari
ENSPEMG00000011156	Trub1	100	82.353	MGP_SPRETEiJ_G0024021	Trub1	100	81.471	Mus_spretus
ENSPEMG00000011156	Trub1	88	86.333	ENSMPUG00000003556	TRUB1	86	86.333	Mustela_putorius_furo
ENSPEMG00000011156	Trub1	87	84.459	ENSMLUG00000017686	TRUB1	87	84.459	Myotis_lucifugus
ENSPEMG00000011156	Trub1	100	78.736	ENSNGAG00000018682	Trub1	100	78.736	Nannospalax_galili
ENSPEMG00000011156	Trub1	72	68.293	ENSNBRG00000023393	trub1	88	68.293	Neolamprologus_brichardi
ENSPEMG00000011156	Trub1	88	85.570	ENSNLEG00000016345	TRUB1	86	85.333	Nomascus_leucogenys
ENSPEMG00000011156	Trub1	59	85.572	ENSMEUG00000006603	TRUB1	78	83.412	Notamacropus_eugenii
ENSPEMG00000011156	Trub1	100	73.837	ENSOPRG00000009371	TRUB1	100	73.837	Ochotona_princeps
ENSPEMG00000011156	Trub1	100	73.352	ENSODEG00000010854	TRUB1	87	79.208	Octodon_degus
ENSPEMG00000011156	Trub1	72	67.886	ENSONIG00000007249	trub1	89	67.886	Oreochromis_niloticus
ENSPEMG00000011156	Trub1	81	75.547	ENSOANG00000001556	TRUB1	90	75.547	Ornithorhynchus_anatinus
ENSPEMG00000011156	Trub1	89	79.734	ENSOCUG00000009456	TRUB1	87	79.734	Oryctolagus_cuniculus
ENSPEMG00000011156	Trub1	71	68.595	ENSORLG00000029719	trub1	92	65.759	Oryzias_latipes
ENSPEMG00000011156	Trub1	71	68.182	ENSORLG00020016767	trub1	91	65.370	Oryzias_latipes_hni
ENSPEMG00000011156	Trub1	71	68.595	ENSORLG00015014728	trub1	92	65.759	Oryzias_latipes_hsok
ENSPEMG00000011156	Trub1	76	65.504	ENSOMEG00000014556	trub1	91	65.504	Oryzias_melastigma
ENSPEMG00000011156	Trub1	89	85.714	ENSOGAG00000015895	TRUB1	86	85.714	Otolemur_garnettii
ENSPEMG00000011156	Trub1	87	82.508	ENSOARG00000015591	TRUB1	88	81.613	Ovis_aries
ENSPEMG00000011156	Trub1	99	78.223	ENSPPAG00000043645	TRUB1	86	85.333	Pan_paniscus
ENSPEMG00000011156	Trub1	88	84.950	ENSPPRG00000007096	TRUB1	99	77.810	Panthera_pardus
ENSPEMG00000011156	Trub1	88	85.284	ENSPTIG00000006378	TRUB1	99	78.098	Panthera_tigris_altaica
ENSPEMG00000011156	Trub1	99	78.223	ENSPTRG00000002964	TRUB1	86	85.333	Pan_troglodytes
ENSPEMG00000011156	Trub1	88	85.906	ENSPANG00000020712	TRUB1	86	85.667	Papio_anubis
ENSPEMG00000011156	Trub1	80	75.000	ENSPSIG00000012877	TRUB1	93	75.000	Pelodiscus_sinensis
ENSPEMG00000011156	Trub1	72	66.531	ENSPMGG00000000075	trub1	88	66.531	Periophthalmus_magnuspinnatus
ENSPEMG00000011156	Trub1	83	79.152	ENSPCIG00000009729	TRUB1	78	78.819	Phascolarctos_cinereus
ENSPEMG00000011156	Trub1	78	62.879	ENSPFOG00000009950	trub1	96	62.879	Poecilia_formosa
ENSPEMG00000011156	Trub1	78	63.396	ENSPLAG00000013855	trub1	92	63.396	Poecilia_latipinna
ENSPEMG00000011156	Trub1	72	66.122	ENSPMEG00000009064	trub1	88	66.122	Poecilia_mexicana
ENSPEMG00000011156	Trub1	78	63.636	ENSPREG00000003343	trub1	94	63.636	Poecilia_reticulata
ENSPEMG00000011156	Trub1	88	85.000	ENSPPYG00000002676	TRUB1	86	85.000	Pongo_abelii
ENSPEMG00000011156	Trub1	88	75.333	ENSPCAG00000008427	TRUB1	85	75.333	Procavia_capensis
ENSPEMG00000011156	Trub1	89	79.734	ENSPCOG00000024360	TRUB1	85	79.734	Propithecus_coquereli
ENSPEMG00000011156	Trub1	62	89.623	ENSPVAG00000007575	TRUB1	82	89.767	Pteropus_vampyrus
ENSPEMG00000011156	Trub1	74	67.063	ENSPNYG00000018614	trub1	96	64.419	Pundamilia_nyererei
ENSPEMG00000011156	Trub1	75	58.594	ENSPNAG00000006881	trub1	83	58.594	Pygocentrus_nattereri
ENSPEMG00000011156	Trub1	100	82.698	ENSRNOG00000017321	Trub1	100	82.698	Rattus_norvegicus
ENSPEMG00000011156	Trub1	99	70.201	ENSRBIG00000033423	TRUB1	85	76.000	Rhinopithecus_bieti
ENSPEMG00000011156	Trub1	99	78.510	ENSRROG00000033902	TRUB1	86	85.667	Rhinopithecus_roxellana
ENSPEMG00000011156	Trub1	88	85.667	ENSSBOG00000024237	TRUB1	85	85.667	Saimiri_boliviensis_boliviensis
ENSPEMG00000011156	Trub1	73	77.689	ENSSHAG00000009346	TRUB1	84	77.689	Sarcophilus_harrisii
ENSPEMG00000011156	Trub1	71	69.547	ENSSFOG00015022124	trub1	83	69.547	Scleropages_formosus
ENSPEMG00000011156	Trub1	72	68.699	ENSSMAG00000001020	trub1	88	68.699	Scophthalmus_maximus
ENSPEMG00000011156	Trub1	71	68.750	ENSSDUG00000016414	trub1	88	68.699	Seriola_dumerili
ENSPEMG00000011156	Trub1	71	69.167	ENSSLDG00000015486	trub1	88	69.106	Seriola_lalandi_dorsalis
ENSPEMG00000011156	Trub1	84	74.306	ENSSPUG00000001642	TRUB1	99	74.306	Sphenodon_punctatus
ENSPEMG00000011156	Trub1	76	66.409	ENSSPAG00000001217	trub1	92	66.409	Stegastes_partitus
ENSPEMG00000011156	Trub1	89	81.395	ENSSSCG00000010653	TRUB1	86	81.395	Sus_scrofa
ENSPEMG00000011156	Trub1	79	74.815	ENSTGUG00000010971	TRUB1	97	74.632	Taeniopygia_guttata
ENSPEMG00000011156	Trub1	74	70.356	ENSTBEG00000002880	TRUB1	99	70.356	Tupaia_belangeri
ENSPEMG00000011156	Trub1	63	88.837	ENSTTRG00000005767	TRUB1	100	81.679	Tursiops_truncatus
ENSPEMG00000011156	Trub1	88	86.333	ENSUAMG00000024876	TRUB1	99	80.516	Ursus_americanus
ENSPEMG00000011156	Trub1	87	86.441	ENSUMAG00000002411	TRUB1	99	79.941	Ursus_maritimus
ENSPEMG00000011156	Trub1	89	84.718	ENSVPAG00000005507	TRUB1	86	84.718	Vicugna_pacos
ENSPEMG00000011156	Trub1	87	86.486	ENSVVUG00000010085	TRUB1	71	86.486	Vulpes_vulpes
ENSPEMG00000011156	Trub1	80	63.235	ENSXETG00000023828	trub1	98	63.235	Xenopus_tropicalis
ENSPEMG00000011156	Trub1	70	65.690	ENSXCOG00000017847	trub1	86	65.021	Xiphophorus_couchianus
ENSPEMG00000011156	Trub1	77	62.595	ENSXMAG00000014701	trub1	94	62.595	Xiphophorus_maculatus