EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPEMG00000011213 (Gene tree)
Gene ID: 102906340
Gene Symbol: -
Alias: -
Full Name: cleavage and polyadenylation factor I subunit 1
Gene Type: protein_coding
Species: Peromyscus_maniculatus_bairdii
Status: putative
Strand: Minus strand
Length: 2541 bases
Position: chrKI615742.1:577736-580276
Accession: 102906340
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPEMP00000010118	Clp1	PF06807.14	1.5e-30	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPEMT00000014293	-	1856	XM_006989637	ENSPEMP00000010118	425 (aa)	XP_006989699	UPI00038C24C9

Gene Model

Click here to download ENSPEMG00000011213's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPEMG00000011213's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPEMG00000011213	-	100	89.647	ENSPEMG00000018856	-	100	89.647

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPEMG00000011213	-	100	99.059	ENSG00000172409	CLP1	100	99.059	Homo_sapiens
ENSPEMG00000011213	-	98	76.651	ENSAPOG00000008242	clp1	96	76.651	Acanthochromis_polyacanthus
ENSPEMG00000011213	-	100	99.529	ENSAMEG00000014551	CLP1	98	99.529	Ailuropoda_melanoleuca
ENSPEMG00000011213	-	99	75.000	ENSACIG00000006310	clp1	97	75.000	Amphilophus_citrinellus
ENSPEMG00000011213	-	100	75.751	ENSAOCG00000010681	clp1	100	75.751	Amphiprion_ocellaris
ENSPEMG00000011213	-	99	75.694	ENSAPEG00000012165	clp1	99	76.651	Amphiprion_percula
ENSPEMG00000011213	-	99	75.926	ENSATEG00000012374	clp1	98	75.926	Anabas_testudineus
ENSPEMG00000011213	-	100	93.882	ENSACAG00000007139	CLP1	100	93.882	Anolis_carolinensis
ENSPEMG00000011213	-	100	99.059	ENSANAG00000034935	CLP1	100	99.059	Aotus_nancymaae
ENSPEMG00000011213	-	99	75.000	ENSACLG00000013573	clp1	98	75.000	Astatotilapia_calliptera
ENSPEMG00000011213	-	100	77.598	ENSAMXG00000014194	clp1	100	77.598	Astyanax_mexicanus
ENSPEMG00000011213	-	100	99.529	ENSBTAG00000006493	CLP1	100	99.529	Bos_taurus
ENSPEMG00000011213	-	99	47.442	WBGene00010304	clpf-1	99	47.442	Caenorhabditis_elegans
ENSPEMG00000011213	-	100	99.059	ENSCJAG00000008748	CLP1	100	99.059	Callithrix_jacchus
ENSPEMG00000011213	-	100	99.529	ENSCAFG00000007815	CLP1	100	99.529	Canis_familiaris
ENSPEMG00000011213	-	100	99.529	ENSCAFG00020000903	CLP1	100	99.529	Canis_lupus_dingo
ENSPEMG00000011213	-	100	98.824	ENSCHIG00000023497	CLP1	100	98.824	Capra_hircus
ENSPEMG00000011213	-	100	99.059	ENSTSYG00000006824	CLP1	99	99.059	Carlito_syrichta
ENSPEMG00000011213	-	100	99.294	ENSCAPG00000009703	CLP1	100	99.294	Cavia_aperea
ENSPEMG00000011213	-	98	99.519	ENSCPOG00000012554	CLP1	99	99.519	Cavia_porcellus
ENSPEMG00000011213	-	100	98.824	ENSCCAG00000031957	CLP1	100	98.824	Cebus_capucinus
ENSPEMG00000011213	-	100	99.059	ENSCATG00000044628	CLP1	100	99.059	Cercocebus_atys
ENSPEMG00000011213	-	100	99.294	ENSCLAG00000004094	CLP1	100	99.294	Chinchilla_lanigera
ENSPEMG00000011213	-	100	99.059	ENSCSAG00000005994	CLP1	100	99.059	Chlorocebus_sabaeus
ENSPEMG00000011213	-	100	94.118	ENSCPBG00000016843	CLP1	100	94.118	Chrysemys_picta_bellii
ENSPEMG00000011213	-	99	63.270	ENSCING00000003779	-	98	63.270	Ciona_intestinalis
ENSPEMG00000011213	-	99	63.121	ENSCSAVG00000003437	-	99	63.121	Ciona_savignyi
ENSPEMG00000011213	-	100	99.059	ENSCANG00000034335	CLP1	100	99.059	Colobus_angolensis_palliatus
ENSPEMG00000011213	-	100	99.765	ENSCGRG00001002227	CLP1	100	99.765	Cricetulus_griseus_chok1gshd
ENSPEMG00000011213	-	100	99.765	ENSCGRG00000004328	CLP1	100	99.765	Cricetulus_griseus_crigri
ENSPEMG00000011213	-	99	74.246	ENSCSEG00000008614	clp1	98	74.246	Cynoglossus_semilaevis
ENSPEMG00000011213	-	99	75.463	ENSCVAG00000020101	clp1	98	75.463	Cyprinodon_variegatus
ENSPEMG00000011213	-	97	79.714	ENSDARG00000063663	clp1	95	79.714	Danio_rerio
ENSPEMG00000011213	-	99	99.057	ENSDNOG00000042415	CLP1	90	99.057	Dasypus_novemcinctus
ENSPEMG00000011213	-	100	99.529	ENSDORG00000014685	Clp1	100	99.529	Dipodomys_ordii
ENSPEMG00000011213	-	99	55.869	FBgn0033842	cbc	99	55.869	Drosophila_melanogaster
ENSPEMG00000011213	-	100	99.294	ENSETEG00000003009	CLP1	100	99.294	Echinops_telfairi
ENSPEMG00000011213	-	97	72.397	ENSEBUG00000011648	clp1	97	72.397	Eptatretus_burgeri
ENSPEMG00000011213	-	100	98.824	ENSEASG00005002093	CLP1	100	98.824	Equus_asinus_asinus
ENSPEMG00000011213	-	100	98.824	ENSECAG00000011597	CLP1	100	98.824	Equus_caballus
ENSPEMG00000011213	-	100	98.353	ENSEEUG00000012771	CLP1	100	98.353	Erinaceus_europaeus
ENSPEMG00000011213	-	97	79.335	ENSELUG00000024048	clp1	95	79.335	Esox_lucius
ENSPEMG00000011213	-	100	99.294	ENSFCAG00000006633	CLP1	100	99.294	Felis_catus
ENSPEMG00000011213	-	100	92.235	ENSFALG00000011145	CLP1	100	92.235	Ficedula_albicollis
ENSPEMG00000011213	-	100	99.294	ENSFDAG00000000234	CLP1	100	99.294	Fukomys_damarensis
ENSPEMG00000011213	-	99	74.769	ENSFHEG00000014760	CLP1	98	74.769	Fundulus_heteroclitus
ENSPEMG00000011213	-	97	79.665	ENSGMOG00000019340	clp1	95	79.665	Gadus_morhua
ENSPEMG00000011213	-	100	92.941	ENSGALG00000007370	CLP1	100	92.941	Gallus_gallus
ENSPEMG00000011213	-	99	75.231	ENSGAFG00000003020	clp1	99	75.231	Gambusia_affinis
ENSPEMG00000011213	-	99	76.620	ENSGACG00000017832	clp1	98	76.620	Gasterosteus_aculeatus
ENSPEMG00000011213	-	100	93.882	ENSGAGG00000013279	CLP1	100	93.882	Gopherus_agassizii
ENSPEMG00000011213	-	100	99.059	ENSGGOG00000023006	CLP1	100	99.059	Gorilla_gorilla
ENSPEMG00000011213	-	99	75.000	ENSHBUG00000010436	clp1	98	75.000	Haplochromis_burtoni
ENSPEMG00000011213	-	100	99.294	ENSHGLG00000009914	CLP1	100	99.294	Heterocephalus_glaber_female
ENSPEMG00000011213	-	100	99.294	ENSHGLG00100006105	CLP1	100	99.294	Heterocephalus_glaber_male
ENSPEMG00000011213	-	99	76.552	ENSHCOG00000010072	clp1	99	76.552	Hippocampus_comes
ENSPEMG00000011213	-	97	79.524	ENSIPUG00000016238	clp1	94	79.335	Ictalurus_punctatus
ENSPEMG00000011213	-	100	99.294	ENSSTOG00000029257	CLP1	100	99.294	Ictidomys_tridecemlineatus
ENSPEMG00000011213	-	100	98.824	ENSJJAG00000023691	Clp1	100	98.824	Jaculus_jaculus
ENSPEMG00000011213	-	99	74.769	ENSKMAG00000011990	clp1	98	74.769	Kryptolebias_marmoratus
ENSPEMG00000011213	-	99	76.157	ENSLBEG00000010201	clp1	98	76.157	Labrus_bergylta
ENSPEMG00000011213	-	100	85.412	ENSLACG00000003160	CLP1	100	85.412	Latimeria_chalumnae
ENSPEMG00000011213	-	73	76.708	ENSLOCG00000008074	clp1	100	77.640	Lepisosteus_oculatus
ENSPEMG00000011213	-	100	99.059	ENSLAFG00000014907	CLP1	100	99.059	Loxodonta_africana
ENSPEMG00000011213	-	100	99.059	ENSMFAG00000046074	CLP1	100	99.059	Macaca_fascicularis
ENSPEMG00000011213	-	100	99.059	ENSMMUG00000038007	CLP1	99	99.059	Macaca_mulatta
ENSPEMG00000011213	-	100	99.059	ENSMNEG00000000259	CLP1	100	99.059	Macaca_nemestrina
ENSPEMG00000011213	-	100	99.059	ENSMLEG00000043556	CLP1	100	99.059	Mandrillus_leucophaeus
ENSPEMG00000011213	-	100	75.520	ENSMAMG00000002149	clp1	98	75.520	Mastacembelus_armatus
ENSPEMG00000011213	-	99	75.000	ENSMZEG00005002850	clp1	98	75.000	Maylandia_zebra
ENSPEMG00000011213	-	100	92.941	ENSMGAG00000009643	CLP1	100	92.941	Meleagris_gallopavo
ENSPEMG00000011213	-	100	99.059	ENSMAUG00000016261	Clp1	100	99.059	Mesocricetus_auratus
ENSPEMG00000011213	-	100	99.529	ENSMICG00000004895	CLP1	100	99.529	Microcebus_murinus
ENSPEMG00000011213	-	100	100.000	ENSMOCG00000005498	Clp1	100	100.000	Microtus_ochrogaster
ENSPEMG00000011213	-	99	77.083	ENSMMOG00000003229	clp1	98	77.083	Mola_mola
ENSPEMG00000011213	-	100	98.118	ENSMODG00000020107	-	100	98.118	Monodelphis_domestica
ENSPEMG00000011213	-	100	98.118	ENSMODG00000024148	-	100	98.118	Monodelphis_domestica
ENSPEMG00000011213	-	100	74.827	ENSMALG00000014239	clp1	98	74.827	Monopterus_albus
ENSPEMG00000011213	-	100	99.529	MGP_CAROLIEiJ_G0023726	Clp1	100	99.529	Mus_caroli
ENSPEMG00000011213	-	100	99.529	ENSMUSG00000027079	Clp1	100	99.529	Mus_musculus
ENSPEMG00000011213	-	100	99.294	MGP_PahariEiJ_G0025177	Clp1	100	99.294	Mus_pahari
ENSPEMG00000011213	-	100	99.529	MGP_SPRETEiJ_G0024646	Clp1	100	99.529	Mus_spretus
ENSPEMG00000011213	-	100	99.529	ENSMPUG00000000268	CLP1	100	99.529	Mustela_putorius_furo
ENSPEMG00000011213	-	100	98.824	ENSMLUG00000007904	CLP1	100	98.824	Myotis_lucifugus
ENSPEMG00000011213	-	100	99.294	ENSNGAG00000006165	Clp1	100	99.294	Nannospalax_galili
ENSPEMG00000011213	-	99	75.000	ENSNBRG00000005225	clp1	98	75.000	Neolamprologus_brichardi
ENSPEMG00000011213	-	82	93.939	ENSNLEG00000012809	-	100	93.939	Nomascus_leucogenys
ENSPEMG00000011213	-	100	98.118	ENSMEUG00000010949	CLP1	99	98.118	Notamacropus_eugenii
ENSPEMG00000011213	-	70	99.329	ENSOPRG00000007329	CLP1	100	99.329	Ochotona_princeps
ENSPEMG00000011213	-	100	99.294	ENSODEG00000011410	CLP1	100	99.294	Octodon_degus
ENSPEMG00000011213	-	99	74.769	ENSONIG00000005089	clp1	98	74.769	Oreochromis_niloticus
ENSPEMG00000011213	-	100	99.294	ENSOCUG00000007045	CLP1	100	99.294	Oryctolagus_cuniculus
ENSPEMG00000011213	-	99	74.306	ENSORLG00000003647	clp1	98	74.306	Oryzias_latipes
ENSPEMG00000011213	-	99	74.074	ENSORLG00020016676	clp1	98	74.074	Oryzias_latipes_hni
ENSPEMG00000011213	-	99	74.306	ENSORLG00015019484	clp1	98	74.306	Oryzias_latipes_hsok
ENSPEMG00000011213	-	99	74.943	ENSOMEG00000021303	clp1	99	74.943	Oryzias_melastigma
ENSPEMG00000011213	-	100	99.294	ENSOGAG00000004508	CLP1	100	99.294	Otolemur_garnettii
ENSPEMG00000011213	-	100	97.882	ENSOARG00000010145	CLP1	98	97.882	Ovis_aries
ENSPEMG00000011213	-	100	99.059	ENSPPAG00000041519	CLP1	100	99.059	Pan_paniscus
ENSPEMG00000011213	-	100	99.294	ENSPPRG00000006135	CLP1	100	99.294	Panthera_pardus
ENSPEMG00000011213	-	100	99.294	ENSPTIG00000015866	CLP1	100	99.294	Panthera_tigris_altaica
ENSPEMG00000011213	-	100	99.059	ENSPTRG00000047318	CLP1	100	99.059	Pan_troglodytes
ENSPEMG00000011213	-	100	99.059	ENSPANG00000017078	CLP1	97	99.059	Papio_anubis
ENSPEMG00000011213	-	97	80.387	ENSPKIG00000007697	clp1	94	80.387	Paramormyrops_kingsleyae
ENSPEMG00000011213	-	95	91.542	ENSPSIG00000005468	CLP1	100	91.542	Pelodiscus_sinensis
ENSPEMG00000011213	-	99	76.744	ENSPMGG00000012171	clp1	98	76.744	Periophthalmus_magnuspinnatus
ENSPEMG00000011213	-	100	76.291	ENSPMAG00000006707	clp1	100	76.291	Petromyzon_marinus
ENSPEMG00000011213	-	100	97.647	ENSPCIG00000011899	CLP1	99	97.647	Phascolarctos_cinereus
ENSPEMG00000011213	-	99	74.769	ENSPFOG00000008169	clp1	98	74.769	Poecilia_formosa
ENSPEMG00000011213	-	99	74.769	ENSPLAG00000022388	clp1	99	74.710	Poecilia_latipinna
ENSPEMG00000011213	-	99	74.769	ENSPMEG00000021088	clp1	99	74.710	Poecilia_mexicana
ENSPEMG00000011213	-	99	75.000	ENSPREG00000017802	clp1	98	75.000	Poecilia_reticulata
ENSPEMG00000011213	-	53	99.554	ENSPPYG00000003266	-	100	99.554	Pongo_abelii
ENSPEMG00000011213	-	100	99.529	ENSPCOG00000000360	CLP1	98	99.529	Propithecus_coquereli
ENSPEMG00000011213	-	100	99.529	ENSPVAG00000016270	CLP1	100	99.529	Pteropus_vampyrus
ENSPEMG00000011213	-	99	75.000	ENSPNYG00000017274	clp1	97	75.000	Pundamilia_nyererei
ENSPEMG00000011213	-	97	80.238	ENSPNAG00000026460	clp1	95	80.285	Pygocentrus_nattereri
ENSPEMG00000011213	-	100	99.529	ENSRNOG00000007416	Clp1	100	99.529	Rattus_norvegicus
ENSPEMG00000011213	-	100	99.059	ENSRBIG00000018191	CLP1	100	99.059	Rhinopithecus_bieti
ENSPEMG00000011213	-	100	99.059	ENSRROG00000039265	CLP1	100	99.059	Rhinopithecus_roxellana
ENSPEMG00000011213	-	96	79.310	ENSSBOG00000010558	-	93	79.310	Saimiri_boliviensis_boliviensis
ENSPEMG00000011213	-	100	99.059	ENSSBOG00000032517	-	100	99.059	Saimiri_boliviensis_boliviensis
ENSPEMG00000011213	-	100	98.353	ENSSHAG00000015695	CLP1	100	98.353	Sarcophilus_harrisii
ENSPEMG00000011213	-	97	79.059	ENSSFOG00015000628	clp1	96	79.059	Scleropages_formosus
ENSPEMG00000011213	-	99	75.000	ENSSMAG00000019423	clp1	97	75.000	Scophthalmus_maximus
ENSPEMG00000011213	-	99	76.389	ENSSDUG00000014495	clp1	98	76.389	Seriola_dumerili
ENSPEMG00000011213	-	99	76.157	ENSSLDG00000000937	clp1	98	76.157	Seriola_lalandi_dorsalis
ENSPEMG00000011213	-	52	99.103	ENSSARG00000002459	CLP1	100	99.103	Sorex_araneus
ENSPEMG00000011213	-	100	92.941	ENSSPUG00000016811	CLP1	100	92.941	Sphenodon_punctatus
ENSPEMG00000011213	-	99	75.231	ENSSPAG00000016052	clp1	98	75.231	Stegastes_partitus
ENSPEMG00000011213	-	100	99.529	ENSSSCG00000031442	CLP1	100	99.529	Sus_scrofa
ENSPEMG00000011213	-	100	92.000	ENSTGUG00000007002	CLP1	100	92.000	Taeniopygia_guttata
ENSPEMG00000011213	-	99	76.402	ENSTRUG00000012602	clp1	98	76.402	Takifugu_rubripes
ENSPEMG00000011213	-	99	75.935	ENSTNIG00000013125	clp1	98	75.935	Tetraodon_nigroviridis
ENSPEMG00000011213	-	100	98.353	ENSTBEG00000009975	CLP1	100	98.353	Tupaia_belangeri
ENSPEMG00000011213	-	100	99.059	ENSTTRG00000002096	CLP1	100	99.059	Tursiops_truncatus
ENSPEMG00000011213	-	100	99.529	ENSUAMG00000011388	CLP1	100	99.529	Ursus_americanus
ENSPEMG00000011213	-	100	99.529	ENSUMAG00000018317	CLP1	100	99.529	Ursus_maritimus
ENSPEMG00000011213	-	100	99.529	ENSVVUG00000017138	CLP1	97	99.529	Vulpes_vulpes
ENSPEMG00000011213	-	98	77.698	ENSXETG00000007088	clp1	95	78.417	Xenopus_tropicalis
ENSPEMG00000011213	-	99	75.000	ENSXCOG00000002287	clp1	98	75.000	Xiphophorus_couchianus
ENSPEMG00000011213	-	99	75.000	ENSXMAG00000009783	clp1	98	75.000	Xiphophorus_maculatus