EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: ENSPEMG00000011252 (Gene tree)
Gene ID: 102905874
Gene Symbol: -
Alias: -
Full Name: heterogeneous nuclear ribonucleoprotein A1-like
Gene Type: protein_coding
Species: Peromyscus_maniculatus_bairdii
Status: putative
Strand: Minus strand
Length: 1762 bases
Position: chrKI616570.1:938234-939995
Accession: 102905874
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPEMP00000010188	RRM_1	PF00076.22	4.1e-34	1	2
ENSPEMP00000010188	RRM_1	PF00076.22	4.1e-34	2	2
ENSPEMP00000010188	HnRNPA1	PF11627.8	1.8e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPEMT00000014363	-	1392	XM_015990329	ENSPEMP00000010188	325 (aa)	XP_015845815	UPI00077DD2BA

Gene Model

Click here to download ENSPEMG00000011252's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPEMG00000011252's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPEMG00000011252	-	59	80.829	ENSPEMG00000007388	-	69	82.418
ENSPEMG00000011252	-	85	69.565	ENSPEMG00000014384	Hnrnpa2b1	62	76.344
ENSPEMG00000011252	-	52	43.478	ENSPEMG00000021793	-	100	43.478
ENSPEMG00000011252	-	59	40.000	ENSPEMG00000023987	Hnrnpab	67	40.000
ENSPEMG00000011252	-	100	83.692	ENSPEMG00000003344	-	93	85.953
ENSPEMG00000011252	-	92	84.825	ENSPEMG00000011977	-	92	59.441
ENSPEMG00000011252	-	56	42.941	ENSPEMG00000014804	Hnrnpd	56	40.659
ENSPEMG00000011252	-	100	96.308	ENSPEMG00000020545	-	100	96.308
ENSPEMG00000011252	-	64	55.941	ENSPEMG00000020274	Hnrnpa0	96	45.455
ENSPEMG00000011252	-	86	93.594	ENSPEMG00000012402	-	100	93.594
ENSPEMG00000011252	-	60	78.061	ENSPEMG00000014669	-	81	68.627
ENSPEMG00000011252	-	59	40.789	ENSPEMG00000012411	Rbm3	56	39.080
ENSPEMG00000011252	-	60	83.673	ENSPEMG00000021885	Hnrnpa3	95	77.273
ENSPEMG00000011252	-	56	37.059	ENSPEMG00000016545	-	59	35.556
ENSPEMG00000011252	-	61	74.194	ENSPEMG00000018087	-	82	75.000