EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPEMG00000011403 (Gene tree)
Gene ID: 102905262
Gene Symbol: Tnrc6b
Alias: -
Full Name: trinucleotide repeat containing 6B
Gene Type: protein_coding
Species: Peromyscus_maniculatus_bairdii
Status: putative
Strand: Plus strand
Length: 184112 bases
Position: chrKI615431.1:2583847-2767958
Accession: 102905262
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPEMP00000010401	Ago_hook	PF10427.9	1e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPEMT00000014576	-	8269	XM_006979180	ENSPEMP00000010401	1813 (aa)	XP_006979242	UPI00077D9E51

Gene Model

Click here to download ENSPEMG00000011403's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPEMG00000011403's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPEMG00000011403	Tnrc6b	98	37.914	ENSPEMG00000016318	Tnrc6a	98	36.823
ENSPEMG00000011403	Tnrc6b	96	34.776	ENSPEMG00000009785	Tnrc6c	98	34.017

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPEMG00000011403	Tnrc6b	97	91.822	ENSG00000100354	TNRC6B	100	97.297	Homo_sapiens
ENSPEMG00000011403	Tnrc6b	99	90.350	ENSAMEG00000011025	TNRC6B	100	89.612	Ailuropoda_melanoleuca
ENSPEMG00000011403	Tnrc6b	96	83.656	ENSAPLG00000009347	TNRC6B	100	83.428	Anas_platyrhynchos
ENSPEMG00000011403	Tnrc6b	97	72.375	ENSACAG00000007281	TNRC6B	99	72.656	Anolis_carolinensis
ENSPEMG00000011403	Tnrc6b	97	93.360	ENSANAG00000035042	TNRC6B	100	94.477	Aotus_nancymaae
ENSPEMG00000011403	Tnrc6b	84	47.383	ENSAMXG00000008707	tnrc6b	97	43.878	Astyanax_mexicanus
ENSPEMG00000011403	Tnrc6b	98	93.382	ENSBTAG00000021076	TNRC6B	99	93.683	Bos_taurus
ENSPEMG00000011403	Tnrc6b	96	94.444	ENSCJAG00000002732	TNRC6B	99	97.465	Callithrix_jacchus
ENSPEMG00000011403	Tnrc6b	96	94.755	ENSCAFG00000001255	TNRC6B	99	91.554	Canis_familiaris
ENSPEMG00000011403	Tnrc6b	99	94.506	ENSCAFG00020002189	TNRC6B	99	94.435	Canis_lupus_dingo
ENSPEMG00000011403	Tnrc6b	99	93.441	ENSCHIG00000003491	TNRC6B	100	93.663	Capra_hircus
ENSPEMG00000011403	Tnrc6b	97	93.665	ENSTSYG00000011836	TNRC6B	100	93.772	Carlito_syrichta
ENSPEMG00000011403	Tnrc6b	100	95.482	ENSCPOG00000005705	TNRC6B	100	95.537	Cavia_porcellus
ENSPEMG00000011403	Tnrc6b	96	93.654	ENSCCAG00000019912	TNRC6B	100	91.657	Cebus_capucinus
ENSPEMG00000011403	Tnrc6b	96	94.619	ENSCATG00000029291	TNRC6B	99	94.448	Cercocebus_atys
ENSPEMG00000011403	Tnrc6b	100	95.702	ENSCLAG00000016942	TNRC6B	100	95.702	Chinchilla_lanigera
ENSPEMG00000011403	Tnrc6b	97	90.699	ENSCSAG00000006021	TNRC6B	99	90.643	Chlorocebus_sabaeus
ENSPEMG00000011403	Tnrc6b	89	84.157	ENSCPBG00000022932	TNRC6B	99	84.038	Chrysemys_picta_bellii
ENSPEMG00000011403	Tnrc6b	96	94.448	ENSCANG00000030776	TNRC6B	100	94.014	Colobus_angolensis_palliatus
ENSPEMG00000011403	Tnrc6b	96	97.825	ENSCGRG00001020166	Tnrc6b	99	97.825	Cricetulus_griseus_chok1gshd
ENSPEMG00000011403	Tnrc6b	100	97.740	ENSCGRG00000016696	Tnrc6b	99	97.693	Cricetulus_griseus_crigri
ENSPEMG00000011403	Tnrc6b	100	93.740	ENSDNOG00000012744	TNRC6B	100	93.830	Dasypus_novemcinctus
ENSPEMG00000011403	Tnrc6b	100	95.925	ENSDORG00000003386	Tnrc6b	100	95.925	Dipodomys_ordii
ENSPEMG00000011403	Tnrc6b	97	83.183	ENSETEG00000006570	TNRC6B	99	83.747	Echinops_telfairi
ENSPEMG00000011403	Tnrc6b	99	94.872	ENSEASG00005005306	TNRC6B	99	94.713	Equus_asinus_asinus
ENSPEMG00000011403	Tnrc6b	100	95.055	ENSECAG00000009759	TNRC6B	99	96.000	Equus_caballus
ENSPEMG00000011403	Tnrc6b	55	94.872	ENSEEUG00000008690	-	59	94.872	Erinaceus_europaeus
ENSPEMG00000011403	Tnrc6b	100	94.618	ENSFCAG00000004791	TNRC6B	100	94.454	Felis_catus
ENSPEMG00000011403	Tnrc6b	93	86.706	ENSFALG00000012195	TNRC6B	100	86.353	Ficedula_albicollis
ENSPEMG00000011403	Tnrc6b	100	96.033	ENSFDAG00000021368	TNRC6B	100	96.033	Fukomys_damarensis
ENSPEMG00000011403	Tnrc6b	97	87.479	ENSGALG00000012050	TNRC6B	97	87.140	Gallus_gallus
ENSPEMG00000011403	Tnrc6b	97	86.727	ENSGAGG00000025188	TNRC6B	98	86.333	Gopherus_agassizii
ENSPEMG00000011403	Tnrc6b	97	94.265	ENSGGOG00000008444	TNRC6B	100	94.830	Gorilla_gorilla
ENSPEMG00000011403	Tnrc6b	100	95.322	ENSHGLG00000009306	TNRC6B	100	95.047	Heterocephalus_glaber_female
ENSPEMG00000011403	Tnrc6b	100	94.986	ENSHGLG00100018108	TNRC6B	100	94.821	Heterocephalus_glaber_male
ENSPEMG00000011403	Tnrc6b	79	44.271	ENSIPUG00000001515	tnrc6b	95	46.880	Ictalurus_punctatus
ENSPEMG00000011403	Tnrc6b	100	95.870	ENSSTOG00000008927	TNRC6B	100	95.870	Ictidomys_tridecemlineatus
ENSPEMG00000011403	Tnrc6b	100	95.091	ENSJJAG00000015779	Tnrc6b	100	94.870	Jaculus_jaculus
ENSPEMG00000011403	Tnrc6b	98	61.686	ENSLACG00000000628	-	99	62.321	Latimeria_chalumnae
ENSPEMG00000011403	Tnrc6b	76	93.546	ENSLAFG00000014473	TNRC6B	99	93.619	Loxodonta_africana
ENSPEMG00000011403	Tnrc6b	96	94.894	ENSMFAG00000003862	TNRC6B	99	94.562	Macaca_fascicularis
ENSPEMG00000011403	Tnrc6b	100	94.728	ENSMMUG00000021345	TNRC6B	100	94.366	Macaca_mulatta
ENSPEMG00000011403	Tnrc6b	97	94.653	ENSMNEG00000042745	TNRC6B	99	94.482	Macaca_nemestrina
ENSPEMG00000011403	Tnrc6b	96	94.734	ENSMLEG00000041780	TNRC6B	100	94.366	Mandrillus_leucophaeus
ENSPEMG00000011403	Tnrc6b	98	83.587	ENSMGAG00000012333	TNRC6B	64	81.667	Meleagris_gallopavo
ENSPEMG00000011403	Tnrc6b	100	96.856	ENSMAUG00000016123	Tnrc6b	100	96.856	Mesocricetus_auratus
ENSPEMG00000011403	Tnrc6b	99	93.043	ENSMICG00000014056	TNRC6B	100	94.595	Microcebus_murinus
ENSPEMG00000011403	Tnrc6b	97	97.500	ENSMOCG00000020334	Tnrc6b	100	97.500	Microtus_ochrogaster
ENSPEMG00000011403	Tnrc6b	100	97.463	MGP_CAROLIEiJ_G0020043	Tnrc6b	100	97.463	Mus_caroli
ENSPEMG00000011403	Tnrc6b	100	97.518	ENSMUSG00000047888	Tnrc6b	100	97.518	Mus_musculus
ENSPEMG00000011403	Tnrc6b	100	97.242	MGP_PahariEiJ_G0020045	Tnrc6b	100	97.242	Mus_pahari
ENSPEMG00000011403	Tnrc6b	100	97.739	MGP_SPRETEiJ_G0020941	Tnrc6b	100	97.739	Mus_spretus
ENSPEMG00000011403	Tnrc6b	95	96.023	ENSMPUG00000016442	TNRC6B	99	83.636	Mustela_putorius_furo
ENSPEMG00000011403	Tnrc6b	97	90.153	ENSMLUG00000008765	TNRC6B	99	89.405	Myotis_lucifugus
ENSPEMG00000011403	Tnrc6b	100	95.980	ENSNGAG00000021294	Tnrc6b	100	95.980	Nannospalax_galili
ENSPEMG00000011403	Tnrc6b	86	93.636	ENSNLEG00000015311	TNRC6B	100	94.830	Nomascus_leucogenys
ENSPEMG00000011403	Tnrc6b	91	85.022	ENSOPRG00000012054	TNRC6B	88	91.304	Ochotona_princeps
ENSPEMG00000011403	Tnrc6b	100	96.198	ENSODEG00000013146	TNRC6B	100	96.198	Octodon_degus
ENSPEMG00000011403	Tnrc6b	100	93.901	ENSOCUG00000016128	TNRC6B	100	93.736	Oryctolagus_cuniculus
ENSPEMG00000011403	Tnrc6b	97	90.224	ENSOGAG00000011096	TNRC6B	99	89.477	Otolemur_garnettii
ENSPEMG00000011403	Tnrc6b	100	93.702	ENSOARG00000017238	TNRC6B	100	93.593	Ovis_aries
ENSPEMG00000011403	Tnrc6b	96	95.006	ENSPPAG00000028514	TNRC6B	100	95.412	Pan_paniscus
ENSPEMG00000011403	Tnrc6b	97	91.201	ENSPPRG00000017741	TNRC6B	100	94.138	Panthera_pardus
ENSPEMG00000011403	Tnrc6b	97	86.502	ENSPTIG00000022064	TNRC6B	98	88.144	Panthera_tigris_altaica
ENSPEMG00000011403	Tnrc6b	96	94.362	ENSPTRG00000047826	TNRC6B	100	94.595	Pan_troglodytes
ENSPEMG00000011403	Tnrc6b	96	86.162	ENSPANG00000009271	TNRC6B	99	88.800	Papio_anubis
ENSPEMG00000011403	Tnrc6b	97	86.832	ENSPSIG00000005318	TNRC6B	99	86.550	Pelodiscus_sinensis
ENSPEMG00000011403	Tnrc6b	97	85.431	ENSPCIG00000020347	TNRC6B	99	85.374	Phascolarctos_cinereus
ENSPEMG00000011403	Tnrc6b	69	46.244	ENSPFOG00000006033	-	95	42.416	Poecilia_formosa
ENSPEMG00000011403	Tnrc6b	97	91.653	ENSPPYG00000011849	TNRC6B	99	91.765	Pongo_abelii
ENSPEMG00000011403	Tnrc6b	77	89.560	ENSPCAG00000008739	TNRC6B	77	89.114	Procavia_capensis
ENSPEMG00000011403	Tnrc6b	99	93.726	ENSPCOG00000020790	TNRC6B	100	95.065	Propithecus_coquereli
ENSPEMG00000011403	Tnrc6b	93	94.519	ENSPVAG00000004975	TNRC6B	94	94.519	Pteropus_vampyrus
ENSPEMG00000011403	Tnrc6b	63	48.663	ENSPNAG00000011713	tnrc6b	79	44.825	Pygocentrus_nattereri
ENSPEMG00000011403	Tnrc6b	100	96.870	ENSRNOG00000024907	Tnrc6b	100	96.870	Rattus_norvegicus
ENSPEMG00000011403	Tnrc6b	95	94.480	ENSRBIG00000035576	TNRC6B	99	94.131	Rhinopithecus_bieti
ENSPEMG00000011403	Tnrc6b	97	94.482	ENSRROG00000031135	TNRC6B	100	94.131	Rhinopithecus_roxellana
ENSPEMG00000011403	Tnrc6b	97	91.695	ENSSBOG00000029743	TNRC6B	99	91.923	Saimiri_boliviensis_boliviensis
ENSPEMG00000011403	Tnrc6b	97	81.927	ENSSHAG00000009692	TNRC6B	99	80.650	Sarcophilus_harrisii
ENSPEMG00000011403	Tnrc6b	65	85.593	ENSSARG00000007971	-	70	85.593	Sorex_araneus
ENSPEMG00000011403	Tnrc6b	100	94.011	ENSSSCG00000000078	TNRC6B	99	93.852	Sus_scrofa
ENSPEMG00000011403	Tnrc6b	91	83.072	ENSTGUG00000010138	-	99	82.530	Taeniopygia_guttata
ENSPEMG00000011403	Tnrc6b	100	87.486	ENSTTRG00000011465	TNRC6B	100	88.681	Tursiops_truncatus
ENSPEMG00000011403	Tnrc6b	100	92.676	ENSUAMG00000007174	TNRC6B	98	94.158	Ursus_americanus
ENSPEMG00000011403	Tnrc6b	97	94.195	ENSUMAG00000014336	TNRC6B	100	94.052	Ursus_maritimus
ENSPEMG00000011403	Tnrc6b	69	90.524	ENSVPAG00000001467	TNRC6B	75	89.315	Vicugna_pacos
ENSPEMG00000011403	Tnrc6b	100	94.615	ENSVVUG00000007064	TNRC6B	100	94.605	Vulpes_vulpes