EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPEMG00000011422 (Gene tree)
Gene ID: 102927954
Gene Symbol: Rad54l
Alias: -
Full Name: RAD54 like
Gene Type: protein_coding
Species: Peromyscus_maniculatus_bairdii
Status: putative
Strand: Plus strand
Length: 34235 bases
Position: chrKI615617.1:1051157-1085391
Accession: 102927954
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPEMP00000010480	ResIII	PF04851.15	2.7e-08	1	1
ENSPEMP00000010470	ResIII	PF04851.15	2.8e-08	1	1
ENSPEMP00000010470	DEAD	PF00270.29	3e-06	1	1
ENSPEMP00000010480	DEAD	PF00270.29	3e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPEMT00000014655	-	2166	-	ENSPEMP00000010480	721 (aa)	-	-
ENSPEMT00000014645	-	2229	XM_016005125	ENSPEMP00000010470	742 (aa)	XP_015860611	-

Gene Model

Click here to download ENSPEMG00000011422's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPEMG00000011422's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPEMG00000011422	Rad54l	68	30.153	ENSPEMG00000017579	Hells	63	30.153
ENSPEMG00000011422	Rad54l	82	45.385	ENSPEMG00000012133	Rad54b	71	45.385
ENSPEMG00000011422	Rad54l	66	31.213	ENSPEMG00000021081	-	54	31.148
ENSPEMG00000011422	Rad54l	68	39.409	ENSPEMG00000022358	-	54	39.901
ENSPEMG00000011422	Rad54l	68	30.648	ENSPEMG00000013528	Chd1l	50	30.785

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPEMG00000011422	Rad54l	99	93.968	ENSG00000085999	RAD54L	100	97.333	Homo_sapiens
ENSPEMG00000011422	Rad54l	99	77.328	ENSAPOG00000011643	rad54l	99	77.328	Acanthochromis_polyacanthus
ENSPEMG00000011422	Rad54l	99	93.423	ENSAMEG00000013902	RAD54L	99	93.423	Ailuropoda_melanoleuca
ENSPEMG00000011422	Rad54l	99	77.658	ENSACIG00000001939	rad54l	99	77.658	Amphilophus_citrinellus
ENSPEMG00000011422	Rad54l	99	80.297	ENSAOCG00000017576	rad54l	99	80.297	Amphiprion_ocellaris
ENSPEMG00000011422	Rad54l	95	81.073	ENSAPEG00000020658	rad54l	98	81.073	Amphiprion_percula
ENSPEMG00000011422	Rad54l	94	82.260	ENSATEG00000006767	rad54l	99	82.260	Anabas_testudineus
ENSPEMG00000011422	Rad54l	94	85.470	ENSAPLG00000006389	RAD54L	99	85.470	Anas_platyrhynchos
ENSPEMG00000011422	Rad54l	99	83.133	ENSACAG00000002312	RAD54L	99	83.133	Anolis_carolinensis
ENSPEMG00000011422	Rad54l	99	93.968	ENSANAG00000035439	RAD54L	99	93.968	Aotus_nancymaae
ENSPEMG00000011422	Rad54l	99	76.944	ENSACLG00000018711	rad54l	99	76.944	Astatotilapia_calliptera
ENSPEMG00000011422	Rad54l	99	79.812	ENSAMXG00000012777	rad54l	99	79.812	Astyanax_mexicanus
ENSPEMG00000011422	Rad54l	100	93.984	ENSBTAG00000019901	RAD54L	99	93.984	Bos_taurus
ENSPEMG00000011422	Rad54l	93	57.963	WBGene00004298	rad-54	84	57.963	Caenorhabditis_elegans
ENSPEMG00000011422	Rad54l	99	91.176	ENSCJAG00000021080	RAD54L	94	93.262	Callithrix_jacchus
ENSPEMG00000011422	Rad54l	99	93.298	ENSCAFG00000004272	RAD54L	99	93.298	Canis_familiaris
ENSPEMG00000011422	Rad54l	99	93.289	ENSCAFG00020015066	RAD54L	99	93.289	Canis_lupus_dingo
ENSPEMG00000011422	Rad54l	99	93.976	ENSCHIG00000020118	RAD54L	99	93.976	Capra_hircus
ENSPEMG00000011422	Rad54l	99	93.708	ENSTSYG00000002032	RAD54L	99	93.708	Carlito_syrichta
ENSPEMG00000011422	Rad54l	100	94.645	ENSCPOG00000006768	RAD54L	99	94.645	Cavia_porcellus
ENSPEMG00000011422	Rad54l	99	94.638	ENSCCAG00000025783	RAD54L	99	94.638	Cebus_capucinus
ENSPEMG00000011422	Rad54l	99	93.834	ENSCATG00000030589	RAD54L	99	93.834	Cercocebus_atys
ENSPEMG00000011422	Rad54l	100	95.181	ENSCLAG00000004645	RAD54L	99	95.181	Chinchilla_lanigera
ENSPEMG00000011422	Rad54l	99	93.968	ENSCSAG00000001229	RAD54L	99	93.968	Chlorocebus_sabaeus
ENSPEMG00000011422	Rad54l	99	85.542	ENSCPBG00000005675	RAD54L	99	85.542	Chrysemys_picta_bellii
ENSPEMG00000011422	Rad54l	99	63.178	ENSCING00000024456	-	99	63.097	Ciona_intestinalis
ENSPEMG00000011422	Rad54l	99	63.268	ENSCSAVG00000010859	-	99	63.268	Ciona_savignyi
ENSPEMG00000011422	Rad54l	99	93.700	ENSCANG00000034891	RAD54L	99	93.700	Colobus_angolensis_palliatus
ENSPEMG00000011422	Rad54l	100	97.177	ENSCGRG00001014807	Rad54l	100	97.177	Cricetulus_griseus_chok1gshd
ENSPEMG00000011422	Rad54l	100	97.177	ENSCGRG00000016038	Rad54l	100	97.177	Cricetulus_griseus_crigri
ENSPEMG00000011422	Rad54l	99	77.898	ENSCSEG00000001983	rad54l	99	77.898	Cynoglossus_semilaevis
ENSPEMG00000011422	Rad54l	87	80.632	ENSCVAG00000019561	rad54l	99	80.632	Cyprinodon_variegatus
ENSPEMG00000011422	Rad54l	99	79.273	ENSDARG00000018623	rad54l	99	79.273	Danio_rerio
ENSPEMG00000011422	Rad54l	100	92.503	ENSDNOG00000003395	RAD54L	100	92.503	Dasypus_novemcinctus
ENSPEMG00000011422	Rad54l	99	85.306	ENSDORG00000002632	Rad54l	99	85.306	Dipodomys_ordii
ENSPEMG00000011422	Rad54l	99	55.319	FBgn0002989	okr	95	55.319	Drosophila_melanogaster
ENSPEMG00000011422	Rad54l	78	94.355	ENSETEG00000000550	RAD54L	78	94.355	Echinops_telfairi
ENSPEMG00000011422	Rad54l	99	93.557	ENSEASG00005004511	RAD54L	99	93.557	Equus_asinus_asinus
ENSPEMG00000011422	Rad54l	99	93.968	ENSECAG00000008760	RAD54L	99	95.161	Equus_caballus
ENSPEMG00000011422	Rad54l	100	87.818	ENSEEUG00000008113	RAD54L	100	87.818	Erinaceus_europaeus
ENSPEMG00000011422	Rad54l	99	79.973	ENSELUG00000002295	rad54l	99	79.973	Esox_lucius
ENSPEMG00000011422	Rad54l	100	92.905	ENSFCAG00000003444	RAD54L	100	92.905	Felis_catus
ENSPEMG00000011422	Rad54l	99	84.070	ENSFALG00000009480	RAD54L	99	84.070	Ficedula_albicollis
ENSPEMG00000011422	Rad54l	99	95.174	ENSFDAG00000007806	RAD54L	99	95.174	Fukomys_damarensis
ENSPEMG00000011422	Rad54l	65	73.651	ENSFHEG00000009824	rad54l	82	73.651	Fundulus_heteroclitus
ENSPEMG00000011422	Rad54l	99	78.706	ENSGMOG00000014568	rad54l	99	78.706	Gadus_morhua
ENSPEMG00000011422	Rad54l	99	84.182	ENSGALG00000010356	RAD54L	92	84.182	Gallus_gallus
ENSPEMG00000011422	Rad54l	91	78.519	ENSGAFG00000011110	rad54l	100	78.519	Gambusia_affinis
ENSPEMG00000011422	Rad54l	99	79.463	ENSGACG00000003111	rad54l	97	79.463	Gasterosteus_aculeatus
ENSPEMG00000011422	Rad54l	99	85.121	ENSGAGG00000014089	RAD54L	96	85.121	Gopherus_agassizii
ENSPEMG00000011422	Rad54l	99	93.834	ENSGGOG00000010602	RAD54L	99	93.834	Gorilla_gorilla
ENSPEMG00000011422	Rad54l	99	77.151	ENSHBUG00000007793	rad54l	99	77.151	Haplochromis_burtoni
ENSPEMG00000011422	Rad54l	99	94.638	ENSHGLG00000000753	RAD54L	99	94.638	Heterocephalus_glaber_female
ENSPEMG00000011422	Rad54l	99	94.504	ENSHGLG00100016987	RAD54L	99	94.504	Heterocephalus_glaber_male
ENSPEMG00000011422	Rad54l	99	78.046	ENSIPUG00000015999	rad54l	99	80.973	Ictalurus_punctatus
ENSPEMG00000011422	Rad54l	99	94.772	ENSSTOG00000029125	RAD54L	99	94.772	Ictidomys_tridecemlineatus
ENSPEMG00000011422	Rad54l	99	82.503	ENSJJAG00000000235	-	99	82.369	Jaculus_jaculus
ENSPEMG00000011422	Rad54l	99	78.138	ENSKMAG00000009944	rad54l	99	78.138	Kryptolebias_marmoratus
ENSPEMG00000011422	Rad54l	99	80.593	ENSLBEG00000014617	rad54l	99	82.044	Labrus_bergylta
ENSPEMG00000011422	Rad54l	99	81.233	ENSLOCG00000004144	rad54l	100	82.938	Lepisosteus_oculatus
ENSPEMG00000011422	Rad54l	99	94.497	ENSLAFG00000007583	RAD54L	99	94.497	Loxodonta_africana
ENSPEMG00000011422	Rad54l	99	93.834	ENSMFAG00000031241	RAD54L	99	93.834	Macaca_fascicularis
ENSPEMG00000011422	Rad54l	99	93.834	ENSMMUG00000011568	RAD54L	99	93.834	Macaca_mulatta
ENSPEMG00000011422	Rad54l	99	93.834	ENSMNEG00000038562	RAD54L	99	93.834	Macaca_nemestrina
ENSPEMG00000011422	Rad54l	99	93.968	ENSMLEG00000038145	RAD54L	99	93.968	Mandrillus_leucophaeus
ENSPEMG00000011422	Rad54l	99	79.570	ENSMAMG00000022180	rad54l	100	82.111	Mastacembelus_armatus
ENSPEMG00000011422	Rad54l	99	76.810	ENSMZEG00005018081	rad54l	99	76.810	Maylandia_zebra
ENSPEMG00000011422	Rad54l	99	84.161	ENSMGAG00000010634	RAD54L	99	84.161	Meleagris_gallopavo
ENSPEMG00000011422	Rad54l	100	96.505	ENSMAUG00000020076	Rad54l	100	96.505	Mesocricetus_auratus
ENSPEMG00000011422	Rad54l	99	95.040	ENSMICG00000003266	RAD54L	99	95.040	Microcebus_murinus
ENSPEMG00000011422	Rad54l	100	97.581	ENSMOCG00000001778	Rad54l	100	97.581	Microtus_ochrogaster
ENSPEMG00000011422	Rad54l	99	76.478	ENSMALG00000021148	rad54l	99	76.478	Monopterus_albus
ENSPEMG00000011422	Rad54l	100	91.536	MGP_CAROLIEiJ_G0026325	Rad54l	100	91.536	Mus_caroli
ENSPEMG00000011422	Rad54l	100	96.386	ENSMUSG00000028702	Rad54l	100	96.386	Mus_musculus
ENSPEMG00000011422	Rad54l	100	97.051	MGP_PahariEiJ_G0028657	Rad54l	100	97.051	Mus_pahari
ENSPEMG00000011422	Rad54l	100	96.386	MGP_SPRETEiJ_G0027297	Rad54l	100	96.386	Mus_spretus
ENSPEMG00000011422	Rad54l	99	92.771	ENSMPUG00000012883	RAD54L	99	92.771	Mustela_putorius_furo
ENSPEMG00000011422	Rad54l	99	94.631	ENSMLUG00000003763	RAD54L	99	94.631	Myotis_lucifugus
ENSPEMG00000011422	Rad54l	100	94.645	ENSNGAG00000024213	Rad54l	100	94.645	Nannospalax_galili
ENSPEMG00000011422	Rad54l	99	93.700	ENSNLEG00000016548	RAD54L	99	93.700	Nomascus_leucogenys
ENSPEMG00000011422	Rad54l	91	83.876	ENSMEUG00000006793	RAD54L	99	83.876	Notamacropus_eugenii
ENSPEMG00000011422	Rad54l	91	93.750	ENSOPRG00000016016	RAD54L	91	93.750	Ochotona_princeps
ENSPEMG00000011422	Rad54l	100	95.582	ENSODEG00000008519	RAD54L	99	95.582	Octodon_degus
ENSPEMG00000011422	Rad54l	99	76.944	ENSONIG00000007659	rad54l	99	76.944	Oreochromis_niloticus
ENSPEMG00000011422	Rad54l	100	93.976	ENSOCUG00000005229	RAD54L	100	93.976	Oryctolagus_cuniculus
ENSPEMG00000011422	Rad54l	99	78.167	ENSORLG00000002958	rad54l	99	78.571	Oryzias_latipes
ENSPEMG00000011422	Rad54l	99	78.706	ENSORLG00020006554	rad54l	99	81.232	Oryzias_latipes_hni
ENSPEMG00000011422	Rad54l	99	78.167	ENSORLG00015002907	rad54l	99	78.706	Oryzias_latipes_hsok
ENSPEMG00000011422	Rad54l	99	78.841	ENSOMEG00000007770	rad54l	99	78.841	Oryzias_melastigma
ENSPEMG00000011422	Rad54l	100	93.858	ENSOARG00000002264	RAD54L	99	93.858	Ovis_aries
ENSPEMG00000011422	Rad54l	99	93.700	ENSPPAG00000031222	RAD54L	99	93.700	Pan_paniscus
ENSPEMG00000011422	Rad54l	100	92.905	ENSPPRG00000010317	RAD54L	100	92.905	Panthera_pardus
ENSPEMG00000011422	Rad54l	100	92.905	ENSPTIG00000012200	RAD54L	100	92.905	Panthera_tigris_altaica
ENSPEMG00000011422	Rad54l	99	93.834	ENSPTRG00000000689	RAD54L	99	93.834	Pan_troglodytes
ENSPEMG00000011422	Rad54l	99	93.968	ENSPANG00000016295	RAD54L	99	93.968	Papio_anubis
ENSPEMG00000011422	Rad54l	99	76.851	ENSPKIG00000016172	rad54l	99	76.851	Paramormyrops_kingsleyae
ENSPEMG00000011422	Rad54l	99	85.230	ENSPSIG00000003258	RAD54L	99	85.230	Pelodiscus_sinensis
ENSPEMG00000011422	Rad54l	99	74.832	ENSPMGG00000016335	rad54l	99	74.832	Periophthalmus_magnuspinnatus
ENSPEMG00000011422	Rad54l	99	70.013	ENSPMAG00000007719	rad54l	99	70.013	Petromyzon_marinus
ENSPEMG00000011422	Rad54l	99	87.131	ENSPCIG00000029032	RAD54L	99	87.131	Phascolarctos_cinereus
ENSPEMG00000011422	Rad54l	85	81.300	ENSPFOG00000013732	rad54l	99	81.300	Poecilia_formosa
ENSPEMG00000011422	Rad54l	82	79.383	ENSPLAG00000023416	rad54l	99	79.383	Poecilia_latipinna
ENSPEMG00000011422	Rad54l	91	78.815	ENSPMEG00000008299	rad54l	100	78.815	Poecilia_mexicana
ENSPEMG00000011422	Rad54l	99	76.985	ENSPREG00000019955	rad54l	99	76.985	Poecilia_reticulata
ENSPEMG00000011422	Rad54l	99	80.268	ENSPPYG00000001398	RAD54L	99	80.268	Pongo_abelii
ENSPEMG00000011422	Rad54l	80	91.748	ENSPCAG00000005323	RAD54L	80	91.748	Procavia_capensis
ENSPEMG00000011422	Rad54l	100	94.913	ENSPCOG00000015423	RAD54L	100	94.913	Propithecus_coquereli
ENSPEMG00000011422	Rad54l	99	73.369	ENSPNYG00000002942	rad54l	99	73.369	Pundamilia_nyererei
ENSPEMG00000011422	Rad54l	99	79.677	ENSPNAG00000012483	rad54l	99	79.677	Pygocentrus_nattereri
ENSPEMG00000011422	Rad54l	100	96.519	ENSRNOG00000013148	Rad54l	99	96.519	Rattus_norvegicus
ENSPEMG00000011422	Rad54l	99	93.700	ENSRBIG00000043495	RAD54L	99	93.700	Rhinopithecus_bieti
ENSPEMG00000011422	Rad54l	99	93.834	ENSRROG00000020844	RAD54L	99	93.834	Rhinopithecus_roxellana
ENSPEMG00000011422	Rad54l	81	47.597	YGL163C	RAD54	71	48.062	Saccharomyces_cerevisiae
ENSPEMG00000011422	Rad54l	99	94.638	ENSSBOG00000024672	RAD54L	99	94.638	Saimiri_boliviensis_boliviensis
ENSPEMG00000011422	Rad54l	99	87.200	ENSSHAG00000000110	RAD54L	99	87.200	Sarcophilus_harrisii
ENSPEMG00000011422	Rad54l	99	79.973	ENSSDUG00000019147	rad54l	99	79.973	Seriola_dumerili
ENSPEMG00000011422	Rad54l	99	80.242	ENSSLDG00000012330	rad54l	99	80.242	Seriola_lalandi_dorsalis
ENSPEMG00000011422	Rad54l	83	87.601	ENSSARG00000006689	RAD54L	99	87.601	Sorex_araneus
ENSPEMG00000011422	Rad54l	99	79.650	ENSSPAG00000011016	rad54l	99	79.650	Stegastes_partitus
ENSPEMG00000011422	Rad54l	99	93.566	ENSSSCG00000003905	RAD54L	99	93.566	Sus_scrofa
ENSPEMG00000011422	Rad54l	99	83.400	ENSTGUG00000008233	RAD54L	99	83.534	Taeniopygia_guttata
ENSPEMG00000011422	Rad54l	99	75.639	ENSTRUG00000008410	rad54l	99	75.639	Takifugu_rubripes
ENSPEMG00000011422	Rad54l	99	75.034	ENSTNIG00000004716	rad54l	99	75.774	Tetraodon_nigroviridis
ENSPEMG00000011422	Rad54l	100	85.944	ENSTTRG00000006315	RAD54L	100	85.944	Tursiops_truncatus
ENSPEMG00000011422	Rad54l	99	92.848	ENSUAMG00000011824	RAD54L	99	92.848	Ursus_americanus
ENSPEMG00000011422	Rad54l	99	91.768	ENSUMAG00000023603	RAD54L	99	91.768	Ursus_maritimus
ENSPEMG00000011422	Rad54l	99	93.298	ENSVVUG00000007201	RAD54L	99	93.298	Vulpes_vulpes
ENSPEMG00000011422	Rad54l	96	77.469	ENSXETG00000004369	rad54l	99	77.469	Xenopus_tropicalis
ENSPEMG00000011422	Rad54l	55	75.550	ENSXCOG00000016028	rad54l	82	78.191	Xiphophorus_couchianus