EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPEMG00000011553 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Peromyscus_maniculatus_bairdii
Status: putative
Strand: Minus strand
Length: 789 bases
Position: chrKI616497.1:175467-176255
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPEMP00000010623	RRM_5	PF13893.6	3.1e-07	1	1
ENSPEMP00000010623	RRM_1	PF00076.22	3.2e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPEMT00000014799	-	756	-	ENSPEMP00000010623	251 (aa)	-	-

Gene Model

Click here to download ENSPEMG00000011553's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPEMG00000011553's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPEMG00000011553	-	100	92.776	ENSPEMG00000017947	-	99	92.776

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPEMG00000011553	-	100	76.226	ENSG00000076053	RBM7	99	85.811	Homo_sapiens
ENSPEMG00000011553	-	63	49.390	ENSAPOG00000012768	rbm7	96	41.473	Acanthochromis_polyacanthus
ENSPEMG00000011553	-	100	77.273	ENSAMEG00000013276	-	99	77.273	Ailuropoda_melanoleuca
ENSPEMG00000011553	-	59	49.020	ENSAOCG00000004178	rbm7	94	41.313	Amphiprion_ocellaris
ENSPEMG00000011553	-	59	49.020	ENSAPEG00000021981	rbm7	94	41.313	Amphiprion_percula
ENSPEMG00000011553	-	83	55.093	ENSAPLG00000005180	-	94	55.093	Anas_platyrhynchos
ENSPEMG00000011553	-	92	49.004	ENSACAG00000011589	-	92	50.996	Anolis_carolinensis
ENSPEMG00000011553	-	58	86.395	ENSANAG00000031879	-	94	86.395	Aotus_nancymaae
ENSPEMG00000011553	-	62	83.333	ENSANAG00000031340	-	100	83.333	Aotus_nancymaae
ENSPEMG00000011553	-	58	54.967	ENSACLG00000001203	rbm7	94	42.308	Astatotilapia_calliptera
ENSPEMG00000011553	-	98	44.358	ENSAMXG00000037251	rbm7	93	44.358	Astyanax_mexicanus
ENSPEMG00000011553	-	100	76.515	ENSBTAG00000008219	RBM7	99	78.030	Bos_taurus
ENSPEMG00000011553	-	100	75.094	ENSCJAG00000011949	-	97	85.714	Callithrix_jacchus
ENSPEMG00000011553	-	100	75.285	ENSCAFG00000013514	-	99	76.426	Canis_familiaris
ENSPEMG00000011553	-	100	75.665	ENSCAFG00020002518	-	100	82.353	Canis_lupus_dingo
ENSPEMG00000011553	-	100	75.758	ENSCHIG00000008632	-	99	77.273	Capra_hircus
ENSPEMG00000011553	-	100	75.758	ENSCHIG00000010879	-	99	77.273	Capra_hircus
ENSPEMG00000011553	-	100	76.604	ENSTSYG00000013731	-	99	76.604	Carlito_syrichta
ENSPEMG00000011553	-	87	75.966	ENSCAPG00000012045	-	99	75.966	Cavia_aperea
ENSPEMG00000011553	-	90	74.477	ENSCPOG00000034273	-	99	74.477	Cavia_porcellus
ENSPEMG00000011553	-	100	76.226	ENSCCAG00000036534	-	99	77.358	Cebus_capucinus
ENSPEMG00000011553	-	100	77.736	ENSCATG00000037361	-	99	77.736	Cercocebus_atys
ENSPEMG00000011553	-	100	77.444	ENSCLAG00000014875	-	99	77.444	Chinchilla_lanigera
ENSPEMG00000011553	-	100	77.528	ENSCSAG00000002756	-	99	77.528	Chlorocebus_sabaeus
ENSPEMG00000011553	-	58	87.162	ENSCHOG00000012747	-	100	87.162	Choloepus_hoffmanni
ENSPEMG00000011553	-	56	48.936	ENSCHOG00000007826	RBM11	65	48.936	Choloepus_hoffmanni
ENSPEMG00000011553	-	96	62.353	ENSCPBG00000009366	-	84	70.513	Chrysemys_picta_bellii
ENSPEMG00000011553	-	100	77.736	ENSCANG00000031398	-	99	77.736	Colobus_angolensis_palliatus
ENSPEMG00000011553	-	100	88.973	ENSCGRG00001019236	Rbm7	99	88.973	Cricetulus_griseus_chok1gshd
ENSPEMG00000011553	-	100	88.593	ENSCGRG00000005045	Rbm7	99	88.593	Cricetulus_griseus_crigri
ENSPEMG00000011553	-	88	43.220	ENSCVAG00000023415	rbm7	83	43.220	Cyprinodon_variegatus
ENSPEMG00000011553	-	59	55.556	ENSDARG00000020841	rbm7	94	42.248	Danio_rerio
ENSPEMG00000011553	-	100	76.981	ENSDNOG00000018423	-	99	76.981	Dasypus_novemcinctus
ENSPEMG00000011553	-	52	51.128	ENSDNOG00000044590	RBM11	53	51.128	Dasypus_novemcinctus
ENSPEMG00000011553	-	98	80.488	ENSDORG00000029149	Rbm7	92	80.488	Dipodomys_ordii
ENSPEMG00000011553	-	100	71.429	ENSETEG00000015869	-	99	71.429	Echinops_telfairi
ENSPEMG00000011553	-	100	78.030	ENSEASG00005006676	-	99	78.030	Equus_asinus_asinus
ENSPEMG00000011553	-	100	78.409	ENSECAG00000004636	-	99	78.409	Equus_caballus
ENSPEMG00000011553	-	96	73.140	ENSEEUG00000015854	-	90	73.140	Erinaceus_europaeus
ENSPEMG00000011553	-	97	44.706	ENSELUG00000017868	rbm7	93	45.525	Esox_lucius
ENSPEMG00000011553	-	100	76.515	ENSFCAG00000040484	-	99	78.030	Felis_catus
ENSPEMG00000011553	-	94	47.410	ENSFALG00000010039	-	81	48.837	Ficedula_albicollis
ENSPEMG00000011553	-	100	75.379	ENSFDAG00000010616	-	99	75.379	Fukomys_damarensis
ENSPEMG00000011553	-	93	37.398	ENSGMOG00000013362	rbm7	86	37.398	Gadus_morhua
ENSPEMG00000011553	-	99	48.727	ENSGALG00000007017	RBM7	95	48.727	Gallus_gallus
ENSPEMG00000011553	-	58	52.349	ENSGAFG00000000870	rbm7	54	52.349	Gambusia_affinis
ENSPEMG00000011553	-	58	55.629	ENSGACG00000006628	rbm7	55	55.629	Gasterosteus_aculeatus
ENSPEMG00000011553	-	96	62.992	ENSGAGG00000021127	-	85	62.992	Gopherus_agassizii
ENSPEMG00000011553	-	59	85.714	ENSGGOG00000009941	-	64	94.186	Gorilla_gorilla
ENSPEMG00000011553	-	58	54.967	ENSHBUG00000004319	rbm7	94	42.308	Haplochromis_burtoni
ENSPEMG00000011553	-	100	68.421	ENSHGLG00000002486	-	94	68.421	Heterocephalus_glaber_female
ENSPEMG00000011553	-	99	69.962	ENSHGLG00000014428	-	98	69.962	Heterocephalus_glaber_female
ENSPEMG00000011553	-	60	68.000	ENSHGLG00000013918	-	100	68.000	Heterocephalus_glaber_female
ENSPEMG00000011553	-	100	80.303	ENSHGLG00000018700	RBM7	99	80.303	Heterocephalus_glaber_female
ENSPEMG00000011553	-	96	75.099	ENSHGLG00000016655	-	98	75.099	Heterocephalus_glaber_female
ENSPEMG00000011553	-	100	68.421	ENSHGLG00100011792	-	94	68.421	Heterocephalus_glaber_male
ENSPEMG00000011553	-	100	79.924	ENSHGLG00100005358	-	99	79.924	Heterocephalus_glaber_male
ENSPEMG00000011553	-	99	69.962	ENSHGLG00100011703	-	98	69.962	Heterocephalus_glaber_male
ENSPEMG00000011553	-	100	57.540	ENSHGLG00100005739	-	93	59.524	Heterocephalus_glaber_male
ENSPEMG00000011553	-	60	68.000	ENSHGLG00100015249	-	100	68.000	Heterocephalus_glaber_male
ENSPEMG00000011553	-	96	75.099	ENSHGLG00100009317	-	98	75.099	Heterocephalus_glaber_male
ENSPEMG00000011553	-	94	45.455	ENSIPUG00000009397	rbm7	89	46.281	Ictalurus_punctatus
ENSPEMG00000011553	-	95	65.546	ENSSTOG00000031973	-	93	65.546	Ictidomys_tridecemlineatus
ENSPEMG00000011553	-	100	74.242	ENSSTOG00000012459	-	99	74.242	Ictidomys_tridecemlineatus
ENSPEMG00000011553	-	99	68.821	ENSJJAG00000016540	-	99	68.821	Jaculus_jaculus
ENSPEMG00000011553	-	100	77.358	ENSJJAG00000011823	-	99	77.358	Jaculus_jaculus
ENSPEMG00000011553	-	94	39.130	ENSLBEG00000024902	rbm7	90	39.922	Labrus_bergylta
ENSPEMG00000011553	-	94	57.490	ENSLACG00000018620	-	90	57.490	Latimeria_chalumnae
ENSPEMG00000011553	-	94	45.059	ENSLOCG00000002408	rbm7	90	45.490	Lepisosteus_oculatus
ENSPEMG00000011553	-	100	71.053	ENSLAFG00000012444	-	99	71.053	Loxodonta_africana
ENSPEMG00000011553	-	100	78.113	ENSMFAG00000000965	-	99	78.113	Macaca_fascicularis
ENSPEMG00000011553	-	100	78.030	ENSMMUG00000012270	RBM7	99	78.030	Macaca_mulatta
ENSPEMG00000011553	-	100	77.736	ENSMNEG00000005397	-	99	77.736	Macaca_nemestrina
ENSPEMG00000011553	-	100	78.491	ENSMLEG00000041953	-	99	78.491	Mandrillus_leucophaeus
ENSPEMG00000011553	-	95	41.313	ENSMAMG00000014145	rbm7	95	42.023	Mastacembelus_armatus
ENSPEMG00000011553	-	58	54.305	ENSMZEG00005013295	rbm7	94	41.923	Maylandia_zebra
ENSPEMG00000011553	-	98	51.493	ENSMGAG00000003004	-	93	51.493	Meleagris_gallopavo
ENSPEMG00000011553	-	59	93.243	ENSMAUG00000017938	-	95	93.243	Mesocricetus_auratus
ENSPEMG00000011553	-	100	87.452	ENSMAUG00000001942	-	99	87.452	Mesocricetus_auratus
ENSPEMG00000011553	-	98	83.740	ENSMICG00000042981	-	90	83.740	Microcebus_murinus
ENSPEMG00000011553	-	99	90.800	ENSMOCG00000009674	Rbm7	99	88.213	Microtus_ochrogaster
ENSPEMG00000011553	-	51	47.482	ENSMMOG00000004967	rbm7	68	57.746	Mola_mola
ENSPEMG00000011553	-	99	67.939	ENSMODG00000013918	-	95	67.939	Monodelphis_domestica
ENSPEMG00000011553	-	58	52.000	ENSMALG00000010901	rbm7	52	54.000	Monopterus_albus
ENSPEMG00000011553	-	100	87.879	MGP_CAROLIEiJ_G0032167	Rbm7	99	87.879	Mus_caroli
ENSPEMG00000011553	-	100	87.833	ENSMUSG00000042396	Rbm7	93	95.238	Mus_musculus
ENSPEMG00000011553	-	100	87.833	MGP_PahariEiJ_G0015035	Rbm7	99	87.833	Mus_pahari
ENSPEMG00000011553	-	100	87.072	MGP_SPRETEiJ_G0033306	Rbm7	99	87.072	Mus_spretus
ENSPEMG00000011553	-	100	75.758	ENSMPUG00000003941	-	99	76.515	Mustela_putorius_furo
ENSPEMG00000011553	-	99	73.563	ENSMLUG00000023234	-	98	73.563	Myotis_lucifugus
ENSPEMG00000011553	-	98	81.377	ENSNGAG00000006244	-	93	81.377	Nannospalax_galili
ENSPEMG00000011553	-	58	54.967	ENSNBRG00000017104	rbm7	94	41.923	Neolamprologus_brichardi
ENSPEMG00000011553	-	100	77.358	ENSNLEG00000029494	-	99	77.358	Nomascus_leucogenys
ENSPEMG00000011553	-	99	58.661	ENSMEUG00000006187	-	94	58.661	Notamacropus_eugenii
ENSPEMG00000011553	-	99	76.984	ENSOPRG00000011060	-	94	76.984	Ochotona_princeps
ENSPEMG00000011553	-	99	60.081	ENSODEG00000000186	-	91	60.081	Octodon_degus
ENSPEMG00000011553	-	59	85.811	ENSODEG00000010164	-	99	85.811	Octodon_degus
ENSPEMG00000011553	-	77	74.490	ENSODEG00000016844	-	87	74.490	Octodon_degus
ENSPEMG00000011553	-	58	54.545	ENSONIG00000005369	rbm7	94	42.586	Oreochromis_niloticus
ENSPEMG00000011553	-	98	67.059	ENSOANG00000001755	-	87	67.059	Ornithorhynchus_anatinus
ENSPEMG00000011553	-	100	80.377	ENSOCUG00000003342	-	99	80.377	Oryctolagus_cuniculus
ENSPEMG00000011553	-	57	55.705	ENSORLG00000028880	rbm7	54	55.705	Oryzias_latipes
ENSPEMG00000011553	-	57	55.034	ENSORLG00020010841	rbm7	54	55.034	Oryzias_latipes_hni
ENSPEMG00000011553	-	57	53.289	ENSORLG00015000536	rbm7	54	54.362	Oryzias_latipes_hsok
ENSPEMG00000011553	-	100	78.868	ENSOGAG00000016857	-	99	78.868	Otolemur_garnettii
ENSPEMG00000011553	-	100	75.758	ENSOARG00000000924	-	99	77.273	Ovis_aries
ENSPEMG00000011553	-	100	76.604	ENSPPAG00000027572	-	99	76.604	Pan_paniscus
ENSPEMG00000011553	-	100	78.030	ENSPPRG00000004372	-	99	78.030	Panthera_pardus
ENSPEMG00000011553	-	100	78.030	ENSPTIG00000013512	-	99	78.030	Panthera_tigris_altaica
ENSPEMG00000011553	-	100	76.604	ENSPTRG00000004305	RBM7	99	76.604	Pan_troglodytes
ENSPEMG00000011553	-	96	70.356	ENSPTRG00000049329	-	97	70.356	Pan_troglodytes
ENSPEMG00000011553	-	98	81.377	ENSPANG00000009431	-	93	81.377	Papio_anubis
ENSPEMG00000011553	-	98	46.215	ENSPKIG00000016648	rbm7	94	46.215	Paramormyrops_kingsleyae
ENSPEMG00000011553	-	58	48.993	ENSPMGG00000001523	rbm7	90	65.000	Periophthalmus_magnuspinnatus
ENSPEMG00000011553	-	94	69.758	ENSPCIG00000011225	-	78	70.312	Phascolarctos_cinereus
ENSPEMG00000011553	-	59	50.993	ENSPFOG00000002193	rbm7	54	50.993	Poecilia_formosa
ENSPEMG00000011553	-	59	51.656	ENSPLAG00000010517	rbm7	54	51.656	Poecilia_latipinna
ENSPEMG00000011553	-	58	51.333	ENSPMEG00000003603	rbm7	54	51.333	Poecilia_mexicana
ENSPEMG00000011553	-	94	40.562	ENSPREG00000015610	rbm7	90	40.562	Poecilia_reticulata
ENSPEMG00000011553	-	100	76.604	ENSPPYG00000003894	-	99	76.604	Pongo_abelii
ENSPEMG00000011553	-	87	60.435	ENSPCAG00000003270	-	99	60.435	Procavia_capensis
ENSPEMG00000011553	-	100	78.409	ENSPVAG00000005294	-	99	78.409	Pteropus_vampyrus
ENSPEMG00000011553	-	58	54.967	ENSPNYG00000012084	rbm7	94	42.308	Pundamilia_nyererei
ENSPEMG00000011553	-	59	55.128	ENSPNAG00000012813	rbm7	92	42.636	Pygocentrus_nattereri
ENSPEMG00000011553	-	100	78.113	ENSRBIG00000044762	-	99	78.113	Rhinopithecus_bieti
ENSPEMG00000011553	-	100	78.113	ENSRROG00000032280	-	99	78.113	Rhinopithecus_roxellana
ENSPEMG00000011553	-	100	74.340	ENSSBOG00000027830	-	99	75.472	Saimiri_boliviensis_boliviensis
ENSPEMG00000011553	-	99	69.349	ENSSHAG00000008426	-	95	69.349	Sarcophilus_harrisii
ENSPEMG00000011553	-	96	46.341	ENSSFOG00015008458	rbm7	91	45.565	Scleropages_formosus
ENSPEMG00000011553	-	59	51.948	ENSSMAG00000003040	rbm7	57	51.948	Scophthalmus_maximus
ENSPEMG00000011553	-	59	50.000	ENSSDUG00000005361	rbm7	55	48.718	Seriola_dumerili
ENSPEMG00000011553	-	59	50.000	ENSSLDG00000003221	rbm7	55	48.718	Seriola_lalandi_dorsalis
ENSPEMG00000011553	-	83	53.604	ENSSPUG00000006032	-	80	56.757	Sphenodon_punctatus
ENSPEMG00000011553	-	59	51.316	ENSSPAG00000019320	rbm7	68	69.767	Stegastes_partitus
ENSPEMG00000011553	-	100	77.567	ENSSSCG00000027905	-	99	77.567	Sus_scrofa
ENSPEMG00000011553	-	98	46.008	ENSTGUG00000000117	-	93	46.008	Taeniopygia_guttata
ENSPEMG00000011553	-	58	48.993	ENSTRUG00000020355	rbm7	55	48.993	Takifugu_rubripes
ENSPEMG00000011553	-	100	68.679	ENSTBEG00000008650	-	99	68.679	Tupaia_belangeri
ENSPEMG00000011553	-	100	76.981	ENSTTRG00000001515	-	99	76.981	Tursiops_truncatus
ENSPEMG00000011553	-	100	77.652	ENSUAMG00000019095	-	99	77.652	Ursus_americanus
ENSPEMG00000011553	-	100	77.652	ENSUMAG00000003774	-	99	77.652	Ursus_maritimus
ENSPEMG00000011553	-	99	81.349	ENSVPAG00000006300	-	94	81.349	Vicugna_pacos
ENSPEMG00000011553	-	94	53.441	ENSXETG00000012654	rbm7	95	55.242	Xenopus_tropicalis
ENSPEMG00000011553	-	58	50.667	ENSXMAG00000000970	rbm7	54	50.667	Xiphophorus_maculatus