EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPEMG00000011680 (Gene tree)
Gene ID: 102905413
Gene Symbol: Cpsf4l
Alias: -
Full Name: cleavage and polyadenylation specific factor 4 like
Gene Type: protein_coding
Species: Peromyscus_maniculatus_bairdii
Status: putative
Strand: Plus strand
Length: 10152 bases
Position: chrKI615322.1:1330996-1341147
Accession: 102905413
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPEMP00000010841	zf-CCCH	PF00642.24	3.1e-15	1	1
ENSPEMP00000010838	zf-CCCH	PF00642.24	8e-15	1	1
ENSPEMP00000010847	zf-CCCH	PF00642.24	7.2e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPEMT00000015024	-	462	-	ENSPEMP00000010847	153 (aa)	-	-
ENSPEMT00000015018	-	693	XM_006970442	ENSPEMP00000010841	230 (aa)	XP_006970504	-
ENSPEMT00000015015	-	807	-	ENSPEMP00000010838	268 (aa)	-	-

Gene Model

Click here to download ENSPEMG00000011680's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPEMG00000011680's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPEMG00000011680	Cpsf4l	77	61.864	ENSPEMG00000004508	Cpsf4	61	59.756

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPEMG00000011680	Cpsf4l	80	71.545	ENSG00000187959	CPSF4L	93	79.518	Homo_sapiens
ENSPEMG00000011680	Cpsf4l	89	68.293	ENSAMEG00000002707	CPSF4L	75	68.293	Ailuropoda_melanoleuca
ENSPEMG00000011680	Cpsf4l	67	51.456	ENSANAG00000026558	-	65	51.456	Aotus_nancymaae
ENSPEMG00000011680	Cpsf4l	92	49.286	ENSCJAG00000019911	CPSF4L	92	58.683	Callithrix_jacchus
ENSPEMG00000011680	Cpsf4l	72	78.313	ENSCATG00000044555	CPSF4L	93	78.313	Cercocebus_atys
ENSPEMG00000011680	Cpsf4l	81	70.161	ENSCSAG00000004429	CPSF4L	93	77.844	Chlorocebus_sabaeus
ENSPEMG00000011680	Cpsf4l	72	78.313	ENSCANG00000035042	CPSF4L	93	78.313	Colobus_angolensis_palliatus
ENSPEMG00000011680	Cpsf4l	83	84.252	ENSCGRG00001020079	Cpsf4l	96	84.393	Cricetulus_griseus_chok1gshd
ENSPEMG00000011680	Cpsf4l	83	84.252	ENSCGRG00000010419	Cpsf4l	96	84.393	Cricetulus_griseus_crigri
ENSPEMG00000011680	Cpsf4l	84	70.769	ENSDNOG00000014458	CPSF4L	96	70.769	Dasypus_novemcinctus
ENSPEMG00000011680	Cpsf4l	72	77.108	ENSEASG00005018763	CPSF4L	100	77.108	Equus_asinus_asinus
ENSPEMG00000011680	Cpsf4l	72	77.108	ENSECAG00000024813	CPSF4L	100	77.108	Equus_caballus
ENSPEMG00000011680	Cpsf4l	93	67.133	ENSFCAG00000004745	CPSF4L	79	69.118	Felis_catus
ENSPEMG00000011680	Cpsf4l	72	78.916	ENSGGOG00000026659	CPSF4L	93	78.916	Gorilla_gorilla
ENSPEMG00000011680	Cpsf4l	76	76.437	ENSSTOG00000001849	CPSF4L	100	76.437	Ictidomys_tridecemlineatus
ENSPEMG00000011680	Cpsf4l	77	71.186	ENSLAFG00000010697	CPSF4L	94	75.758	Loxodonta_africana
ENSPEMG00000011680	Cpsf4l	72	78.313	ENSMFAG00000037840	CPSF4L	93	78.313	Macaca_fascicularis
ENSPEMG00000011680	Cpsf4l	72	78.313	ENSMMUG00000001271	CPSF4L	93	78.313	Macaca_mulatta
ENSPEMG00000011680	Cpsf4l	72	78.313	ENSMNEG00000045419	CPSF4L	93	78.313	Macaca_nemestrina
ENSPEMG00000011680	Cpsf4l	72	78.313	ENSMLEG00000038527	CPSF4L	93	78.313	Mandrillus_leucophaeus
ENSPEMG00000011680	Cpsf4l	75	86.087	ENSMAUG00000019519	-	100	87.952	Mesocricetus_auratus
ENSPEMG00000011680	Cpsf4l	71	78.659	ENSMICG00000007503	CPSF4L	94	78.659	Microcebus_murinus
ENSPEMG00000011680	Cpsf4l	59	87.407	ENSMOCG00000015313	-	93	87.407	Microtus_ochrogaster
ENSPEMG00000011680	Cpsf4l	73	66.071	ENSMODG00000025672	CPSF4L	100	66.049	Monodelphis_domestica
ENSPEMG00000011680	Cpsf4l	100	79.739	MGP_CAROLIEiJ_G0017369	-	100	79.739	Mus_caroli
ENSPEMG00000011680	Cpsf4l	100	78.431	ENSMUSG00000018727	Cpsf4l	100	78.431	Mus_musculus
ENSPEMG00000011680	Cpsf4l	81	81.452	MGP_PahariEiJ_G0018499	-	81	81.452	Mus_pahari
ENSPEMG00000011680	Cpsf4l	100	77.778	MGP_SPRETEiJ_G0018215	-	100	77.778	Mus_spretus
ENSPEMG00000011680	Cpsf4l	77	73.729	ENSMPUG00000014276	CPSF4L	100	76.647	Mustela_putorius_furo
ENSPEMG00000011680	Cpsf4l	75	69.298	ENSMLUG00000009617	CPSF4L	93	72.289	Myotis_lucifugus
ENSPEMG00000011680	Cpsf4l	73	83.234	ENSNGAG00000009325	-	98	83.234	Nannospalax_galili
ENSPEMG00000011680	Cpsf4l	72	78.916	ENSNLEG00000001420	CPSF4L	93	78.916	Nomascus_leucogenys
ENSPEMG00000011680	Cpsf4l	66	64.356	ENSMEUG00000004051	-	99	64.356	Notamacropus_eugenii
ENSPEMG00000011680	Cpsf4l	66	73.267	ENSOPRG00000007484	-	75	73.267	Ochotona_princeps
ENSPEMG00000011680	Cpsf4l	80	66.667	ENSOCUG00000026495	CPSF4L	77	69.540	Oryctolagus_cuniculus
ENSPEMG00000011680	Cpsf4l	80	71.545	ENSPPAG00000037000	-	91	77.612	Pan_paniscus
ENSPEMG00000011680	Cpsf4l	67	75.728	ENSPPRG00000001058	CPSF4L	97	57.542	Panthera_pardus
ENSPEMG00000011680	Cpsf4l	67	75.728	ENSPTIG00000012676	CPSF4L	84	81.022	Panthera_tigris_altaica
ENSPEMG00000011680	Cpsf4l	80	71.545	ENSPTRG00000009598	CPSF4L	93	79.518	Pan_troglodytes
ENSPEMG00000011680	Cpsf4l	72	78.313	ENSPANG00000020331	CPSF4L	93	78.313	Papio_anubis
ENSPEMG00000011680	Cpsf4l	75	64.912	ENSPCIG00000001889	CPSF4L	98	66.265	Phascolarctos_cinereus
ENSPEMG00000011680	Cpsf4l	71	73.394	ENSPPYG00000008589	-	78	68.333	Pongo_abelii
ENSPEMG00000011680	Cpsf4l	70	78.882	ENSPCOG00000021801	CPSF4L	91	78.882	Propithecus_coquereli
ENSPEMG00000011680	Cpsf4l	71	73.394	ENSPVAG00000006736	CPSF4L	85	64.394	Pteropus_vampyrus
ENSPEMG00000011680	Cpsf4l	78	72.778	ENSRBIG00000029048	CPSF4L	97	76.506	Rhinopithecus_bieti
ENSPEMG00000011680	Cpsf4l	72	76.506	ENSRROG00000037051	CPSF4L	93	76.506	Rhinopithecus_roxellana
ENSPEMG00000011680	Cpsf4l	56	72.941	ENSTBEG00000012716	-	94	72.941	Tupaia_belangeri
ENSPEMG00000011680	Cpsf4l	71	74.312	ENSTTRG00000005243	CPSF4L	77	71.186	Tursiops_truncatus
ENSPEMG00000011680	Cpsf4l	59	82.353	ENSUAMG00000007728	CPSF4L	87	82.353	Ursus_americanus
ENSPEMG00000011680	Cpsf4l	59	82.353	ENSUMAG00000007869	CPSF4L	87	82.353	Ursus_maritimus