EuRBPDB

Description

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPEMP00000011157	PABP	PF00658.18	2.2e-26	1	1
ENSPEMP00000011144	PABP	PF00658.18	2.4e-26	1	1
ENSPEMP00000011157	RRM_5	PF13893.6	5.6e-07	1	1
ENSPEMP00000011144	RRM_5	PF13893.6	6.6e-07	1	1
ENSPEMP00000011157	RRM_1	PF00076.22	2.2e-89	1	4
ENSPEMP00000011157	RRM_1	PF00076.22	2.2e-89	2	4
ENSPEMP00000011157	RRM_1	PF00076.22	2.2e-89	3	4
ENSPEMP00000011157	RRM_1	PF00076.22	2.2e-89	4	4
ENSPEMP00000011144	RRM_1	PF00076.22	2.7e-89	1	4
ENSPEMP00000011144	RRM_1	PF00076.22	2.7e-89	2	4
ENSPEMP00000011144	RRM_1	PF00076.22	2.7e-89	3	4
ENSPEMP00000011144	RRM_1	PF00076.22	2.7e-89	4	4

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPEMT00000015326	-	1899	-	ENSPEMP00000011144	632 (aa)	-	-
ENSPEMT00000015339	-	1830	-	ENSPEMP00000011157	609 (aa)	-	-

Gene Model

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPEMG00000011901	Pabpc6	99	73.585	ENSPEMG00000013149	Pabpc2	99	73.585
ENSPEMG00000011901	Pabpc6	59	34.831	ENSPEMG00000012948	Rbms2	58	30.303
ENSPEMG00000011901	Pabpc6	100	82.288	ENSPEMG00000014998	Pabpc1	99	82.418
ENSPEMG00000011901	Pabpc6	56	77.246	ENSPEMG00000014159	-	95	71.429
ENSPEMG00000011901	Pabpc6	100	68.567	ENSPEMG00000023569	-	100	68.567
ENSPEMG00000011901	Pabpc6	62	65.301	ENSPEMG00000012565	Pabpc4l	99	65.301
ENSPEMG00000011901	Pabpc6	60	31.847	ENSPEMG00000007877	Trnau1ap	75	31.847
ENSPEMG00000011901	Pabpc6	56	77.246	ENSPEMG00000017399	-	95	71.429
ENSPEMG00000011901	Pabpc6	60	32.558	ENSPEMG00000001090	Tia1	84	32.558
ENSPEMG00000011901	Pabpc6	99	66.822	ENSPEMG00000024193	-	99	66.822
ENSPEMG00000011901	Pabpc6	98	59.164	ENSPEMG00000020671	Pabpc1l	99	58.692
ENSPEMG00000011901	Pabpc6	61	31.818	ENSPEMG00000021782	Elavl4	89	31.818
ENSPEMG00000011901	Pabpc6	61	62.079	ENSPEMG00000000171	Pabpc5	96	61.983
ENSPEMG00000011901	Pabpc6	61	38.554	ENSPEMG00000014101	Elavl2	87	38.554
ENSPEMG00000011901	Pabpc6	61	37.349	ENSPEMG00000021058	Elavl3	92	37.349
ENSPEMG00000011901	Pabpc6	59	30.682	ENSPEMG00000014538	Tial1	81	30.682
ENSPEMG00000011901	Pabpc6	50	36.842	ENSPEMG00000013842	Celf6	79	36.842
ENSPEMG00000011901	Pabpc6	56	35.526	ENSPEMG00000015644	Celf1	52	35.526
ENSPEMG00000011901	Pabpc6	72	36.585	ENSPEMG00000001184	Celf3	79	36.585
ENSPEMG00000011901	Pabpc6	63	36.842	ENSPEMG00000019299	Celf4	58	36.842