EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPEMG00000011966 (Gene tree)
Gene ID: 102913296
Gene Symbol: Rc3h1
Alias: -
Full Name: ring finger and CCCH-type domains 1
Gene Type: protein_coding
Species: Peromyscus_maniculatus_bairdii
Status: putative
Strand: Minus strand
Length: 73116 bases
Position: chrKI615440.1:971243-1044358
Accession: 102913296
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPEMP00000011262	zf-CCCH	PF00642.24	0.0002	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPEMT00000015446	-	6659	XM_006979596	ENSPEMP00000011262	1128 (aa)	XP_006979658	UPI00042AA485

Gene Model

Click here to download ENSPEMG00000011966's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPEMG00000011966's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPEMG00000011966	Rc3h1	92	54.163	ENSPEMG00000023441	Rc3h2	85	55.293

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPEMG00000011966	Rc3h1	100	93.469	ENSG00000135870	RC3H1	100	93.822	Homo_sapiens
ENSPEMG00000011966	Rc3h1	100	93.816	ENSAMEG00000015657	RC3H1	100	93.905	Ailuropoda_melanoleuca
ENSPEMG00000011966	Rc3h1	100	85.839	ENSAPLG00000005341	RC3H1	100	85.664	Anas_platyrhynchos
ENSPEMG00000011966	Rc3h1	100	83.304	ENSACAG00000015271	RC3H1	100	83.129	Anolis_carolinensis
ENSPEMG00000011966	Rc3h1	100	93.557	ENSANAG00000036716	RC3H1	100	93.998	Aotus_nancymaae
ENSPEMG00000011966	Rc3h1	100	92.056	ENSBTAG00000052708	RC3H1	100	92.586	Bos_taurus
ENSPEMG00000011966	Rc3h1	100	93.380	ENSCJAG00000009106	RC3H1	100	93.822	Callithrix_jacchus
ENSPEMG00000011966	Rc3h1	100	93.551	ENSCAFG00000014434	RC3H1	100	94.081	Canis_familiaris
ENSPEMG00000011966	Rc3h1	100	93.469	ENSCAFG00020017112	RC3H1	99	97.978	Canis_lupus_dingo
ENSPEMG00000011966	Rc3h1	100	92.491	ENSCHIG00000002873	RC3H1	100	93.021	Capra_hircus
ENSPEMG00000011966	Rc3h1	99	91.961	ENSTSYG00000003913	RC3H1	99	92.403	Carlito_syrichta
ENSPEMG00000011966	Rc3h1	100	89.859	ENSCPOG00000004349	RC3H1	100	89.841	Cavia_porcellus
ENSPEMG00000011966	Rc3h1	100	91.615	ENSCCAG00000025652	RC3H1	100	92.056	Cebus_capucinus
ENSPEMG00000011966	Rc3h1	100	93.557	ENSCATG00000033497	RC3H1	100	93.910	Cercocebus_atys
ENSPEMG00000011966	Rc3h1	100	92.056	ENSCLAG00000011267	RC3H1	100	92.321	Chinchilla_lanigera
ENSPEMG00000011966	Rc3h1	96	93.554	ENSCSAG00000011823	RC3H1	85	93.923	Chlorocebus_sabaeus
ENSPEMG00000011966	Rc3h1	100	87.445	ENSCPBG00000014670	RC3H1	100	87.713	Chrysemys_picta_bellii
ENSPEMG00000011966	Rc3h1	100	93.563	ENSCANG00000032120	RC3H1	100	93.915	Colobus_angolensis_palliatus
ENSPEMG00000011966	Rc3h1	100	97.254	ENSCGRG00001020812	Rc3h1	100	97.254	Cricetulus_griseus_chok1gshd
ENSPEMG00000011966	Rc3h1	100	97.254	ENSCGRG00000011952	Rc3h1	100	97.254	Cricetulus_griseus_crigri
ENSPEMG00000011966	Rc3h1	55	89.550	ENSDNOG00000011494	RC3H1	99	90.193	Dasypus_novemcinctus
ENSPEMG00000011966	Rc3h1	100	92.668	ENSDORG00000004855	Rc3h1	100	92.756	Dipodomys_ordii
ENSPEMG00000011966	Rc3h1	81	93.637	ENSETEG00000012064	RC3H1	87	93.758	Echinops_telfairi
ENSPEMG00000011966	Rc3h1	100	92.138	ENSEASG00005017000	RC3H1	100	92.580	Equus_asinus_asinus
ENSPEMG00000011966	Rc3h1	100	91.961	ENSECAG00000021208	RC3H1	100	92.403	Equus_caballus
ENSPEMG00000011966	Rc3h1	89	82.375	ENSEEUG00000014861	RC3H1	93	82.375	Erinaceus_europaeus
ENSPEMG00000011966	Rc3h1	100	93.645	ENSFCAG00000014924	RC3H1	100	94.175	Felis_catus
ENSPEMG00000011966	Rc3h1	100	85.302	ENSFALG00000002947	RC3H1	100	85.026	Ficedula_albicollis
ENSPEMG00000011966	Rc3h1	100	92.674	ENSFDAG00000013303	RC3H1	100	92.851	Fukomys_damarensis
ENSPEMG00000011966	Rc3h1	100	85.312	ENSGALG00000004587	RC3H1	100	85.136	Gallus_gallus
ENSPEMG00000011966	Rc3h1	100	85.601	ENSGAGG00000018194	RC3H1	100	85.338	Gopherus_agassizii
ENSPEMG00000011966	Rc3h1	100	87.544	ENSGGOG00000005735	RC3H1	100	87.898	Gorilla_gorilla
ENSPEMG00000011966	Rc3h1	88	87.009	ENSHGLG00000004183	-	100	86.739	Heterocephalus_glaber_female
ENSPEMG00000011966	Rc3h1	100	91.703	ENSHGLG00100008577	RC3H1	100	91.968	Heterocephalus_glaber_male
ENSPEMG00000011966	Rc3h1	100	93.816	ENSSTOG00000016033	RC3H1	100	94.346	Ictidomys_tridecemlineatus
ENSPEMG00000011966	Rc3h1	100	93.457	ENSJJAG00000018915	Rc3h1	100	93.634	Jaculus_jaculus
ENSPEMG00000011966	Rc3h1	100	75.174	ENSLACG00000016186	RC3H1	100	77.964	Latimeria_chalumnae
ENSPEMG00000011966	Rc3h1	97	93.801	ENSLAFG00000004367	RC3H1	100	94.348	Loxodonta_africana
ENSPEMG00000011966	Rc3h1	100	93.469	ENSMFAG00000033725	RC3H1	100	93.822	Macaca_fascicularis
ENSPEMG00000011966	Rc3h1	100	93.380	ENSMMUG00000000630	RC3H1	100	93.733	Macaca_mulatta
ENSPEMG00000011966	Rc3h1	100	93.557	ENSMNEG00000035968	RC3H1	100	93.910	Macaca_nemestrina
ENSPEMG00000011966	Rc3h1	100	93.469	ENSMLEG00000037455	RC3H1	100	93.822	Mandrillus_leucophaeus
ENSPEMG00000011966	Rc3h1	97	97.371	ENSMAUG00000020864	Rc3h1	100	97.371	Mesocricetus_auratus
ENSPEMG00000011966	Rc3h1	100	93.463	ENSMICG00000003000	RC3H1	100	93.993	Microcebus_murinus
ENSPEMG00000011966	Rc3h1	93	96.011	ENSMOCG00000016587	Rc3h1	98	96.011	Microtus_ochrogaster
ENSPEMG00000011966	Rc3h1	100	89.859	ENSMODG00000004289	RC3H1	100	90.035	Monodelphis_domestica
ENSPEMG00000011966	Rc3h1	100	95.664	MGP_CAROLIEiJ_G0014756	Rc3h1	100	95.575	Mus_caroli
ENSPEMG00000011966	Rc3h1	100	95.487	ENSMUSG00000040423	Rc3h1	100	95.398	Mus_musculus
ENSPEMG00000011966	Rc3h1	100	95.398	MGP_PahariEiJ_G0027992	Rc3h1	100	95.310	Mus_pahari
ENSPEMG00000011966	Rc3h1	100	95.221	MGP_SPRETEiJ_G0015563	Rc3h1	100	95.133	Mus_spretus
ENSPEMG00000011966	Rc3h1	100	93.993	ENSMPUG00000004747	RC3H1	100	94.081	Mustela_putorius_furo
ENSPEMG00000011966	Rc3h1	100	92.396	ENSMLUG00000011127	RC3H1	100	92.927	Myotis_lucifugus
ENSPEMG00000011966	Rc3h1	100	96.106	ENSNGAG00000011135	Rc3h1	100	96.106	Nannospalax_galili
ENSPEMG00000011966	Rc3h1	100	93.645	ENSNLEG00000015327	RC3H1	100	93.998	Nomascus_leucogenys
ENSPEMG00000011966	Rc3h1	99	80.354	ENSOPRG00000013068	RC3H1	99	80.354	Ochotona_princeps
ENSPEMG00000011966	Rc3h1	100	92.491	ENSODEG00000014185	RC3H1	100	92.403	Octodon_degus
ENSPEMG00000011966	Rc3h1	100	88.559	ENSOANG00000000924	RC3H1	100	88.646	Ornithorhynchus_anatinus
ENSPEMG00000011966	Rc3h1	99	92.742	ENSOCUG00000004930	RC3H1	98	93.280	Oryctolagus_cuniculus
ENSPEMG00000011966	Rc3h1	100	86.949	ENSOGAG00000004044	RC3H1	100	87.037	Otolemur_garnettii
ENSPEMG00000011966	Rc3h1	100	92.544	ENSOARG00000013011	RC3H1	100	93.070	Ovis_aries
ENSPEMG00000011966	Rc3h1	100	93.474	ENSPPAG00000039253	RC3H1	100	93.827	Pan_paniscus
ENSPEMG00000011966	Rc3h1	100	93.286	ENSPPRG00000009007	RC3H1	100	93.816	Panthera_pardus
ENSPEMG00000011966	Rc3h1	100	93.404	ENSPTIG00000015326	RC3H1	100	94.019	Panthera_tigris_altaica
ENSPEMG00000011966	Rc3h1	100	93.474	ENSPTRG00000001702	RC3H1	100	93.827	Pan_troglodytes
ENSPEMG00000011966	Rc3h1	100	93.469	ENSPANG00000008886	RC3H1	100	93.822	Papio_anubis
ENSPEMG00000011966	Rc3h1	100	87.719	ENSPSIG00000016181	RC3H1	100	87.632	Pelodiscus_sinensis
ENSPEMG00000011966	Rc3h1	70	92.649	ENSPCIG00000002058	RC3H1	95	98.206	Phascolarctos_cinereus
ENSPEMG00000011966	Rc3h1	100	90.644	ENSPPYG00000000490	RC3H1	98	93.123	Pongo_abelii
ENSPEMG00000011966	Rc3h1	80	97.368	ENSPCAG00000010775	RC3H1	87	97.368	Procavia_capensis
ENSPEMG00000011966	Rc3h1	83	91.979	ENSPCOG00000021795	RC3H1	96	92.620	Propithecus_coquereli
ENSPEMG00000011966	Rc3h1	100	84.452	ENSPVAG00000007593	RC3H1	100	84.806	Pteropus_vampyrus
ENSPEMG00000011966	Rc3h1	97	61.219	ENSPNAG00000023439	rc3h1a	95	90.766	Pygocentrus_nattereri
ENSPEMG00000011966	Rc3h1	100	93.474	ENSRBIG00000037743	RC3H1	100	93.827	Rhinopithecus_bieti
ENSPEMG00000011966	Rc3h1	100	93.380	ENSRROG00000036546	RC3H1	100	93.733	Rhinopithecus_roxellana
ENSPEMG00000011966	Rc3h1	93	83.853	ENSSBOG00000010664	RC3H1	100	87.784	Saimiri_boliviensis_boliviensis
ENSPEMG00000011966	Rc3h1	100	88.987	ENSSHAG00000007589	RC3H1	100	88.987	Sarcophilus_harrisii
ENSPEMG00000011966	Rc3h1	87	86.712	ENSSARG00000004660	RC3H1	86	86.712	Sorex_araneus
ENSPEMG00000011966	Rc3h1	100	81.842	ENSSPUG00000018472	RC3H1	100	82.281	Sphenodon_punctatus
ENSPEMG00000011966	Rc3h1	100	93.640	ENSSSCG00000015498	RC3H1	100	94.170	Sus_scrofa
ENSPEMG00000011966	Rc3h1	100	85.475	ENSTGUG00000004090	RC3H1	100	85.387	Taeniopygia_guttata
ENSPEMG00000011966	Rc3h1	89	94.687	ENSTBEG00000005015	RC3H1	89	94.823	Tupaia_belangeri
ENSPEMG00000011966	Rc3h1	100	92.687	ENSTTRG00000008572	RC3H1	100	93.216	Tursiops_truncatus
ENSPEMG00000011966	Rc3h1	100	93.463	ENSUAMG00000019525	RC3H1	100	93.551	Ursus_americanus
ENSPEMG00000011966	Rc3h1	100	93.910	ENSUMAG00000020087	RC3H1	100	93.998	Ursus_maritimus
ENSPEMG00000011966	Rc3h1	91	98.423	ENSVPAG00000002591	RC3H1	92	98.423	Vicugna_pacos
ENSPEMG00000011966	Rc3h1	100	93.222	ENSVVUG00000014201	RC3H1	100	93.750	Vulpes_vulpes
ENSPEMG00000011966	Rc3h1	100	77.459	ENSXETG00000020030	rc3h1	100	77.198	Xenopus_tropicalis