EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPEMG00000012065 (Gene tree)
Gene ID: 102923092
Gene Symbol: Rbm42
Alias: -
Full Name: RNA binding motif protein 42
Gene Type: protein_coding
Species: Peromyscus_maniculatus_bairdii
Status: putative
Strand: Minus strand
Length: 9900 bases
Position: chrKI615488.1:2503203-2513102
Accession: 102923092
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPEMP00000011411	RRM_1	PF00076.22	6.1e-18	1	1
ENSPEMP00000011407	RRM_1	PF00076.22	6.6e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPEMT00000015598	-	1584	XM_006982057	ENSPEMP00000011411	449 (aa)	XP_006982119	-
ENSPEMT00000015594	-	1718	XM_006982058	ENSPEMP00000011407	478 (aa)	XP_006982120	-

Gene Model

Click here to download ENSPEMG00000012065's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPEMG00000012065's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPEMG00000012065	Rbm42	99	97.500	ENSG00000126254	RBM42	100	100.000	Homo_sapiens
ENSPEMG00000012065	Rbm42	99	97.495	ENSAMEG00000000524	RBM42	100	97.495	Ailuropoda_melanoleuca
ENSPEMG00000012065	Rbm42	99	97.484	ENSANAG00000027537	RBM42	100	100.000	Aotus_nancymaae
ENSPEMG00000012065	Rbm42	99	97.275	ENSBTAG00000013440	RBM42	100	97.275	Bos_taurus
ENSPEMG00000012065	Rbm42	99	97.991	ENSCJAG00000010220	RBM42	100	100.000	Callithrix_jacchus
ENSPEMG00000012065	Rbm42	100	90.487	ENSCAFG00020018628	RBM42	96	100.000	Canis_lupus_dingo
ENSPEMG00000012065	Rbm42	99	97.321	ENSCHIG00000009518	RBM42	100	97.321	Capra_hircus
ENSPEMG00000012065	Rbm42	99	97.280	ENSTSYG00000014688	RBM42	100	100.000	Carlito_syrichta
ENSPEMG00000012065	Rbm42	81	98.446	ENSCAPG00000009566	RBM42	99	98.446	Cavia_aperea
ENSPEMG00000012065	Rbm42	100	96.903	ENSCPOG00000012365	RBM42	100	96.903	Cavia_porcellus
ENSPEMG00000012065	Rbm42	99	98.113	ENSCCAG00000034440	RBM42	100	100.000	Cebus_capucinus
ENSPEMG00000012065	Rbm42	99	97.479	ENSCATG00000041924	RBM42	100	100.000	Cercocebus_atys
ENSPEMG00000012065	Rbm42	100	96.903	ENSCLAG00000012865	RBM42	100	96.903	Chinchilla_lanigera
ENSPEMG00000012065	Rbm42	99	97.118	ENSCSAG00000004422	RBM42	100	97.118	Chlorocebus_sabaeus
ENSPEMG00000012065	Rbm42	99	88.608	ENSCANG00000030272	RBM42	100	88.608	Colobus_angolensis_palliatus
ENSPEMG00000012065	Rbm42	100	98.954	ENSCGRG00001018540	Rbm42	100	98.954	Cricetulus_griseus_chok1gshd
ENSPEMG00000012065	Rbm42	99	96.667	ENSDNOG00000037397	RBM42	100	96.667	Dasypus_novemcinctus
ENSPEMG00000012065	Rbm42	100	97.550	ENSDORG00000013001	Rbm42	100	97.550	Dipodomys_ordii
ENSPEMG00000012065	Rbm42	75	89.394	ENSETEG00000007878	RBM42	73	89.394	Echinops_telfairi
ENSPEMG00000012065	Rbm42	99	98.652	ENSEASG00005001074	RBM42	100	98.652	Equus_asinus_asinus
ENSPEMG00000012065	Rbm42	99	98.652	ENSECAG00000018215	RBM42	100	98.652	Equus_caballus
ENSPEMG00000012065	Rbm42	99	97.904	ENSFCAG00000006376	RBM42	100	100.000	Felis_catus
ENSPEMG00000012065	Rbm42	100	96.896	ENSFDAG00000007440	RBM42	100	96.896	Fukomys_damarensis
ENSPEMG00000012065	Rbm42	99	97.689	ENSGGOG00000009972	RBM42	100	100.000	Gorilla_gorilla
ENSPEMG00000012065	Rbm42	97	96.101	ENSHGLG00000008418	RBM42	99	95.982	Heterocephalus_glaber_female
ENSPEMG00000012065	Rbm42	97	96.101	ENSHGLG00100018667	RBM42	99	95.982	Heterocephalus_glaber_male
ENSPEMG00000012065	Rbm42	100	97.788	ENSSTOG00000013050	RBM42	100	97.788	Ictidomys_tridecemlineatus
ENSPEMG00000012065	Rbm42	100	97.327	ENSJJAG00000010421	Rbm42	100	97.327	Jaculus_jaculus
ENSPEMG00000012065	Rbm42	97	92.934	ENSLAFG00000014993	RBM42	100	91.250	Loxodonta_africana
ENSPEMG00000012065	Rbm42	99	97.479	ENSMFAG00000002758	RBM42	100	100.000	Macaca_fascicularis
ENSPEMG00000012065	Rbm42	99	97.315	ENSMMUG00000018954	RBM42	100	100.000	Macaca_mulatta
ENSPEMG00000012065	Rbm42	100	97.071	ENSMNEG00000030009	RBM42	100	100.000	Macaca_nemestrina
ENSPEMG00000012065	Rbm42	99	97.479	ENSMLEG00000036119	RBM42	100	100.000	Mandrillus_leucophaeus
ENSPEMG00000012065	Rbm42	99	98.323	ENSMICG00000009880	RBM42	100	100.000	Microcebus_murinus
ENSPEMG00000012065	Rbm42	100	98.745	ENSMOCG00000000405	Rbm42	100	98.745	Microtus_ochrogaster
ENSPEMG00000012065	Rbm42	99	99.161	MGP_CAROLIEiJ_G0029536	Rbm42	99	99.161	Mus_caroli
ENSPEMG00000012065	Rbm42	99	99.161	ENSMUSG00000036733	Rbm42	99	99.161	Mus_musculus
ENSPEMG00000012065	Rbm42	99	99.161	MGP_PahariEiJ_G0012770	Rbm42	99	99.161	Mus_pahari
ENSPEMG00000012065	Rbm42	99	99.161	MGP_SPRETEiJ_G0030632	Rbm42	99	99.161	Mus_spretus
ENSPEMG00000012065	Rbm42	99	97.991	ENSMPUG00000006288	RBM42	100	97.991	Mustela_putorius_furo
ENSPEMG00000012065	Rbm42	99	96.226	ENSMLUG00000011334	RBM42	100	96.226	Myotis_lucifugus
ENSPEMG00000012065	Rbm42	100	97.071	ENSNGAG00000019698	Rbm42	100	97.071	Nannospalax_galili
ENSPEMG00000012065	Rbm42	70	99.102	ENSNLEG00000011272	-	94	92.179	Nomascus_leucogenys
ENSPEMG00000012065	Rbm42	95	83.224	ENSMEUG00000016300	RBM42	100	82.195	Notamacropus_eugenii
ENSPEMG00000012065	Rbm42	99	93.711	ENSOPRG00000001229	RBM42	100	91.824	Ochotona_princeps
ENSPEMG00000012065	Rbm42	100	97.124	ENSODEG00000013705	RBM42	99	97.124	Octodon_degus
ENSPEMG00000012065	Rbm42	99	96.674	ENSOCUG00000003337	RBM42	100	96.674	Oryctolagus_cuniculus
ENSPEMG00000012065	Rbm42	99	96.855	ENSOGAG00000004144	RBM42	100	96.855	Otolemur_garnettii
ENSPEMG00000012065	Rbm42	97	88.651	ENSOARG00000004926	RBM42	99	91.649	Ovis_aries
ENSPEMG00000012065	Rbm42	99	97.904	ENSPPAG00000037315	RBM42	100	100.000	Pan_paniscus
ENSPEMG00000012065	Rbm42	99	97.904	ENSPPRG00000016784	RBM42	100	100.000	Panthera_pardus
ENSPEMG00000012065	Rbm42	99	97.484	ENSPTIG00000019270	RBM42	100	100.000	Panthera_tigris_altaica
ENSPEMG00000012065	Rbm42	99	97.689	ENSPTRG00000010852	RBM42	100	100.000	Pan_troglodytes
ENSPEMG00000012065	Rbm42	99	97.679	ENSPANG00000017032	RBM42	100	100.000	Papio_anubis
ENSPEMG00000012065	Rbm42	99	96.495	ENSPPYG00000009871	RBM42	100	96.495	Pongo_abelii
ENSPEMG00000012065	Rbm42	88	96.721	ENSPCAG00000013053	RBM42	100	84.067	Procavia_capensis
ENSPEMG00000012065	Rbm42	99	98.323	ENSPCOG00000026433	-	100	100.000	Propithecus_coquereli
ENSPEMG00000012065	Rbm42	70	99.399	ENSPCOG00000020672	RBM42	81	99.399	Propithecus_coquereli
ENSPEMG00000012065	Rbm42	99	97.275	ENSPVAG00000012815	RBM42	100	97.275	Pteropus_vampyrus
ENSPEMG00000012065	Rbm42	99	99.371	ENSRNOG00000024278	Rbm42	99	99.371	Rattus_norvegicus
ENSPEMG00000012065	Rbm42	99	97.479	ENSRBIG00000007566	RBM42	100	100.000	Rhinopithecus_bieti
ENSPEMG00000012065	Rbm42	99	97.904	ENSRROG00000042313	RBM42	100	100.000	Rhinopithecus_roxellana
ENSPEMG00000012065	Rbm42	85	99.261	ENSSBOG00000030666	RBM42	100	99.261	Saimiri_boliviensis_boliviensis
ENSPEMG00000012065	Rbm42	99	87.500	ENSSARG00000010724	RBM42	100	87.500	Sorex_araneus
ENSPEMG00000012065	Rbm42	99	96.875	ENSSSCG00000002905	RBM42	100	96.875	Sus_scrofa
ENSPEMG00000012065	Rbm42	99	97.694	ENSUAMG00000020711	RBM42	100	97.694	Ursus_americanus
ENSPEMG00000012065	Rbm42	99	97.694	ENSUMAG00000020223	RBM42	100	97.694	Ursus_maritimus
ENSPEMG00000012065	Rbm42	99	97.768	ENSVVUG00000015117	RBM42	100	97.768	Vulpes_vulpes