EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPEMG00000012082 (Gene tree)
Gene ID: 102921915
Gene Symbol: -
Alias: -
Full Name: large 60S subunit nuclear export GTPase 1
Gene Type: protein_coding
Species: Peromyscus_maniculatus_bairdii
Status: putative
Strand: Minus strand
Length: 27020 bases
Position: chrKI615362.1:2967416-2994435
Accession: 102921915
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPEMP00000011438	MMR_HSR1	PF01926.23	1.6e-13	1	1
ENSPEMP00000011434	MMR_HSR1	PF01926.23	1.7e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPEMT00000015621	-	2285	XM_006974482	ENSPEMP00000011434	650 (aa)	XP_006974544	UPI00042ABB8F
ENSPEMT00000015625	-	1980	-	ENSPEMP00000011438	659 (aa)	-	-

Gene Model

Click here to download ENSPEMG00000012082's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPEMG00000012082's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPEMG00000012082	-	100	80.816	ENSG00000041802	LSG1	98	90.805	Homo_sapiens
ENSPEMG00000012082	-	99	63.609	ENSAPOG00000009694	lsg1	99	63.761	Acanthochromis_polyacanthus
ENSPEMG00000012082	-	99	79.607	ENSAMEG00000009343	LSG1	99	79.909	Ailuropoda_melanoleuca
ENSPEMG00000012082	-	98	63.580	ENSACIG00000012406	lsg1	99	63.485	Amphilophus_citrinellus
ENSPEMG00000012082	-	99	63.511	ENSAOCG00000016066	lsg1	99	63.511	Amphiprion_ocellaris
ENSPEMG00000012082	-	99	63.664	ENSAPEG00000003252	lsg1	99	63.511	Amphiprion_percula
ENSPEMG00000012082	-	98	64.186	ENSATEG00000011794	lsg1	99	64.516	Anabas_testudineus
ENSPEMG00000012082	-	95	65.710	ENSACAG00000004222	LSG1	99	65.869	Anolis_carolinensis
ENSPEMG00000012082	-	100	82.175	ENSANAG00000021153	LSG1	100	82.628	Aotus_nancymaae
ENSPEMG00000012082	-	99	62.519	ENSACLG00000000520	lsg1	99	63.415	Astatotilapia_calliptera
ENSPEMG00000012082	-	99	63.253	ENSAMXG00000008271	lsg1	99	63.487	Astyanax_mexicanus
ENSPEMG00000012082	-	100	80.734	ENSBTAG00000008461	LSG1	100	81.707	Bos_taurus
ENSPEMG00000012082	-	70	47.418	WBGene00016907	C53H9.2	89	51.777	Caenorhabditis_elegans
ENSPEMG00000012082	-	100	82.175	ENSCJAG00000013962	LSG1	100	82.628	Callithrix_jacchus
ENSPEMG00000012082	-	95	78.344	ENSCAFG00000013445	LSG1	99	78.822	Canis_familiaris
ENSPEMG00000012082	-	99	77.492	ENSCAFG00020002216	LSG1	99	78.686	Canis_lupus_dingo
ENSPEMG00000012082	-	99	80.092	ENSCHIG00000015769	LSG1	99	81.221	Capra_hircus
ENSPEMG00000012082	-	100	83.233	ENSTSYG00000001447	LSG1	100	83.686	Carlito_syrichta
ENSPEMG00000012082	-	95	77.331	ENSCAPG00000009856	LSG1	100	77.653	Cavia_aperea
ENSPEMG00000012082	-	100	81.420	ENSCCAG00000035744	LSG1	100	81.873	Cebus_capucinus
ENSPEMG00000012082	-	100	81.873	ENSCATG00000042060	LSG1	100	80.816	Cercocebus_atys
ENSPEMG00000012082	-	100	82.175	ENSCSAG00000008796	LSG1	92	82.477	Chlorocebus_sabaeus
ENSPEMG00000012082	-	99	68.694	ENSCPBG00000015941	LSG1	83	69.403	Chrysemys_picta_bellii
ENSPEMG00000012082	-	67	63.158	ENSCING00000007079	-	87	69.697	Ciona_intestinalis
ENSPEMG00000012082	-	85	48.301	ENSCSAVG00000002514	-	83	68.862	Ciona_savignyi
ENSPEMG00000012082	-	100	81.873	ENSCANG00000030709	LSG1	100	82.175	Colobus_angolensis_palliatus
ENSPEMG00000012082	-	100	92.166	ENSCGRG00001019846	Lsg1	100	92.627	Cricetulus_griseus_chok1gshd
ENSPEMG00000012082	-	100	92.166	ENSCGRG00000014617	Lsg1	100	92.627	Cricetulus_griseus_crigri
ENSPEMG00000012082	-	98	63.497	ENSCSEG00000008522	lsg1	99	62.857	Cynoglossus_semilaevis
ENSPEMG00000012082	-	97	64.899	ENSCVAG00000002484	lsg1	99	65.145	Cyprinodon_variegatus
ENSPEMG00000012082	-	99	66.718	ENSDARG00000015352	lsg1	99	66.565	Danio_rerio
ENSPEMG00000012082	-	100	81.155	ENSDNOG00000006224	LSG1	100	81.155	Dasypus_novemcinctus
ENSPEMG00000012082	-	99	47.713	FBgn0266284	Ns3	99	48.176	Drosophila_melanogaster
ENSPEMG00000012082	-	88	89.333	ENSETEG00000003888	LSG1	89	89.333	Echinops_telfairi
ENSPEMG00000012082	-	88	56.197	ENSEBUG00000003119	lsg1	85	56.734	Eptatretus_burgeri
ENSPEMG00000012082	-	100	81.873	ENSEASG00005000678	LSG1	100	82.326	Equus_asinus_asinus
ENSPEMG00000012082	-	100	82.024	ENSECAG00000017659	LSG1	100	82.477	Equus_caballus
ENSPEMG00000012082	-	87	80.342	ENSEEUG00000015217	LSG1	87	80.342	Erinaceus_europaeus
ENSPEMG00000012082	-	99	62.021	ENSELUG00000023973	lsg1	99	62.595	Esox_lucius
ENSPEMG00000012082	-	99	80.333	ENSFCAG00000024957	LSG1	99	80.787	Felis_catus
ENSPEMG00000012082	-	92	64.984	ENSFALG00000007210	LSG1	94	65.260	Ficedula_albicollis
ENSPEMG00000012082	-	100	78.626	ENSFDAG00000017373	LSG1	100	78.931	Fukomys_damarensis
ENSPEMG00000012082	-	97	62.928	ENSFHEG00000003680	lsg1	99	62.273	Fundulus_heteroclitus
ENSPEMG00000012082	-	82	71.915	ENSGMOG00000015834	lsg1	99	60.153	Gadus_morhua
ENSPEMG00000012082	-	99	64.857	ENSGALG00000007058	LSG1	87	65.564	Gallus_gallus
ENSPEMG00000012082	-	97	63.780	ENSGAFG00000015831	lsg1	99	64.264	Gambusia_affinis
ENSPEMG00000012082	-	98	62.888	ENSGACG00000009323	lsg1	99	62.557	Gasterosteus_aculeatus
ENSPEMG00000012082	-	100	81.118	ENSGGOG00000000520	LSG1	100	81.420	Gorilla_gorilla
ENSPEMG00000012082	-	99	63.126	ENSHBUG00000005659	lsg1	99	63.804	Haplochromis_burtoni
ENSPEMG00000012082	-	100	77.252	ENSHGLG00000017390	LSG1	100	77.252	Heterocephalus_glaber_female
ENSPEMG00000012082	-	100	77.099	ENSHGLG00100018587	LSG1	100	77.099	Heterocephalus_glaber_male
ENSPEMG00000012082	-	97	63.396	ENSHCOG00000016848	lsg1	99	63.222	Hippocampus_comes
ENSPEMG00000012082	-	99	64.679	ENSIPUG00000008631	lsg1	99	65.291	Ictalurus_punctatus
ENSPEMG00000012082	-	81	78.788	ENSSTOG00000010234	LSG1	99	78.788	Ictidomys_tridecemlineatus
ENSPEMG00000012082	-	100	81.887	ENSJJAG00000015513	Lsg1	100	82.192	Jaculus_jaculus
ENSPEMG00000012082	-	98	62.871	ENSKMAG00000009681	lsg1	99	62.538	Kryptolebias_marmoratus
ENSPEMG00000012082	-	98	62.853	ENSLBEG00000024261	lsg1	99	62.712	Labrus_bergylta
ENSPEMG00000012082	-	99	65.517	ENSLACG00000013399	LSG1	99	66.267	Latimeria_chalumnae
ENSPEMG00000012082	-	98	66.359	ENSLOCG00000004918	lsg1	99	66.767	Lepisosteus_oculatus
ENSPEMG00000012082	-	100	79.847	ENSLAFG00000012919	-	100	80.305	Loxodonta_africana
ENSPEMG00000012082	-	100	81.722	ENSMFAG00000039903	LSG1	100	80.665	Macaca_fascicularis
ENSPEMG00000012082	-	100	81.873	ENSMMUG00000010708	LSG1	100	82.175	Macaca_mulatta
ENSPEMG00000012082	-	100	81.873	ENSMNEG00000031538	LSG1	100	80.816	Macaca_nemestrina
ENSPEMG00000012082	-	100	81.722	ENSMLEG00000041184	LSG1	100	82.024	Mandrillus_leucophaeus
ENSPEMG00000012082	-	99	61.504	ENSMAMG00000000470	lsg1	99	62.121	Mastacembelus_armatus
ENSPEMG00000012082	-	99	63.278	ENSMZEG00005017865	lsg1	99	63.957	Maylandia_zebra
ENSPEMG00000012082	-	89	64.815	ENSMGAG00000007050	LSG1	99	65.932	Meleagris_gallopavo
ENSPEMG00000012082	-	91	88.870	ENSMAUG00000016976	Lsg1	93	90.219	Mesocricetus_auratus
ENSPEMG00000012082	-	100	80.425	ENSMICG00000049087	LSG1	100	80.880	Microcebus_murinus
ENSPEMG00000012082	-	100	88.821	ENSMOCG00000022136	Lsg1	100	89.602	Microtus_ochrogaster
ENSPEMG00000012082	-	83	74.892	ENSMMOG00000008884	lsg1	99	63.174	Mola_mola
ENSPEMG00000012082	-	99	58.657	ENSMODG00000019828	LSG1	99	58.806	Monodelphis_domestica
ENSPEMG00000012082	-	100	85.933	MGP_CAROLIEiJ_G0020648	Lsg1	100	86.391	Mus_caroli
ENSPEMG00000012082	-	100	86.391	ENSMUSG00000022538	Lsg1	100	86.850	Mus_musculus
ENSPEMG00000012082	-	98	86.335	MGP_PahariEiJ_G0016352	Lsg1	100	86.718	Mus_pahari
ENSPEMG00000012082	-	100	86.239	MGP_SPRETEiJ_G0021544	Lsg1	100	86.697	Mus_spretus
ENSPEMG00000012082	-	99	78.820	ENSMPUG00000003734	LSG1	99	79.123	Mustela_putorius_furo
ENSPEMG00000012082	-	99	83.664	ENSMLUG00000012548	LSG1	99	84.122	Myotis_lucifugus
ENSPEMG00000012082	-	100	84.709	ENSNGAG00000021872	Lsg1	100	85.168	Nannospalax_galili
ENSPEMG00000012082	-	100	82.175	ENSNLEG00000008293	LSG1	100	82.477	Nomascus_leucogenys
ENSPEMG00000012082	-	70	72.165	ENSMEUG00000009041	-	84	72.165	Notamacropus_eugenii
ENSPEMG00000012082	-	99	62.651	ENSONIG00000002635	lsg1	99	63.817	Oreochromis_niloticus
ENSPEMG00000012082	-	95	71.704	ENSOANG00000012742	LSG1	99	71.543	Ornithorhynchus_anatinus
ENSPEMG00000012082	-	100	81.364	ENSOCUG00000004817	LSG1	100	82.477	Oryctolagus_cuniculus
ENSPEMG00000012082	-	98	63.994	ENSORLG00000007695	lsg1	99	63.636	Oryzias_latipes
ENSPEMG00000012082	-	98	63.101	ENSORLG00020016286	lsg1	99	63.070	Oryzias_latipes_hni
ENSPEMG00000012082	-	98	64.151	ENSORLG00015012025	lsg1	99	63.482	Oryzias_latipes_hsok
ENSPEMG00000012082	-	98	63.323	ENSOMEG00000022379	lsg1	99	63.344	Oryzias_melastigma
ENSPEMG00000012082	-	100	80.631	ENSOGAG00000003475	LSG1	100	81.081	Otolemur_garnettii
ENSPEMG00000012082	-	99	79.817	ENSOARG00000020403	LSG1	99	80.945	Ovis_aries
ENSPEMG00000012082	-	100	81.269	ENSPPAG00000029271	LSG1	100	81.269	Pan_paniscus
ENSPEMG00000012082	-	99	79.790	ENSPPRG00000010281	LSG1	99	80.090	Panthera_pardus
ENSPEMG00000012082	-	99	80.484	ENSPTIG00000010789	LSG1	99	80.787	Panthera_tigris_altaica
ENSPEMG00000012082	-	100	81.118	ENSPTRG00000015760	LSG1	100	81.118	Pan_troglodytes
ENSPEMG00000012082	-	100	82.175	ENSPANG00000018249	LSG1	100	81.118	Papio_anubis
ENSPEMG00000012082	-	98	63.736	ENSPKIG00000002895	lsg1	100	63.939	Paramormyrops_kingsleyae
ENSPEMG00000012082	-	96	66.250	ENSPSIG00000009821	LSG1	99	66.197	Pelodiscus_sinensis
ENSPEMG00000012082	-	95	65.056	ENSPMGG00000000931	lsg1	99	65.056	Periophthalmus_magnuspinnatus
ENSPEMG00000012082	-	99	59.559	ENSPMAG00000007451	lsg1	99	59.821	Petromyzon_marinus
ENSPEMG00000012082	-	99	67.914	ENSPCIG00000013890	LSG1	81	67.914	Phascolarctos_cinereus
ENSPEMG00000012082	-	97	64.587	ENSPFOG00000021882	lsg1	99	64.536	Poecilia_formosa
ENSPEMG00000012082	-	97	64.119	ENSPLAG00000019536	lsg1	99	64.079	Poecilia_latipinna
ENSPEMG00000012082	-	97	63.919	ENSPMEG00000017281	lsg1	99	63.885	Poecilia_mexicana
ENSPEMG00000012082	-	97	55.453	ENSPREG00000006048	lsg1	99	55.322	Poecilia_reticulata
ENSPEMG00000012082	-	92	80.492	ENSPPYG00000014425	LSG1	100	80.492	Pongo_abelii
ENSPEMG00000012082	-	90	86.667	ENSPCAG00000005511	LSG1	90	86.667	Procavia_capensis
ENSPEMG00000012082	-	100	81.420	ENSPCOG00000012360	LSG1	100	81.873	Propithecus_coquereli
ENSPEMG00000012082	-	99	62.369	ENSPNYG00000021994	lsg1	99	63.262	Pundamilia_nyererei
ENSPEMG00000012082	-	99	65.309	ENSPNAG00000015533	lsg1	99	65.309	Pygocentrus_nattereri
ENSPEMG00000012082	-	100	87.842	ENSRNOG00000001727	Lsg1	100	88.298	Rattus_norvegicus
ENSPEMG00000012082	-	100	80.967	ENSRBIG00000029053	LSG1	100	81.269	Rhinopithecus_bieti
ENSPEMG00000012082	-	100	80.967	ENSRROG00000037702	LSG1	100	81.269	Rhinopithecus_roxellana
ENSPEMG00000012082	-	61	58.084	YGL099W	LSG1	63	58.084	Saccharomyces_cerevisiae
ENSPEMG00000012082	-	100	82.175	ENSSBOG00000034938	LSG1	100	82.628	Saimiri_boliviensis_boliviensis
ENSPEMG00000012082	-	78	65.970	ENSSHAG00000003487	LSG1	99	66.226	Sarcophilus_harrisii
ENSPEMG00000012082	-	98	63.790	ENSSFOG00015008955	lsg1	99	63.348	Scleropages_formosus
ENSPEMG00000012082	-	98	64.375	ENSSDUG00000004622	lsg1	99	63.293	Seriola_dumerili
ENSPEMG00000012082	-	98	64.099	ENSSLDG00000010869	lsg1	99	63.788	Seriola_lalandi_dorsalis
ENSPEMG00000012082	-	82	79.532	ENSSARG00000012981	LSG1	84	79.778	Sorex_araneus
ENSPEMG00000012082	-	99	67.608	ENSSPUG00000016347	LSG1	99	67.608	Sphenodon_punctatus
ENSPEMG00000012082	-	99	62.577	ENSSPAG00000005508	lsg1	99	62.538	Stegastes_partitus
ENSPEMG00000012082	-	99	79.847	ENSSSCG00000011827	LSG1	99	80.305	Sus_scrofa
ENSPEMG00000012082	-	89	64.393	ENSTGUG00000009068	LSG1	99	64.842	Taeniopygia_guttata
ENSPEMG00000012082	-	97	61.406	ENSTRUG00000017380	lsg1	99	60.976	Takifugu_rubripes
ENSPEMG00000012082	-	97	63.893	ENSTNIG00000015570	lsg1	99	63.706	Tetraodon_nigroviridis
ENSPEMG00000012082	-	99	74.351	ENSTTRG00000000559	LSG1	99	74.351	Tursiops_truncatus
ENSPEMG00000012082	-	99	79.279	ENSUAMG00000012454	LSG1	99	80.787	Ursus_americanus
ENSPEMG00000012082	-	99	79.279	ENSUMAG00000000855	LSG1	99	80.787	Ursus_maritimus
ENSPEMG00000012082	-	95	75.159	ENSVPAG00000012400	LSG1	99	75.159	Vicugna_pacos
ENSPEMG00000012082	-	95	77.796	ENSVVUG00000008956	LSG1	97	78.275	Vulpes_vulpes
ENSPEMG00000012082	-	99	66.867	ENSXETG00000003451	lsg1	99	66.769	Xenopus_tropicalis
ENSPEMG00000012082	-	97	63.707	ENSXCOG00000003239	lsg1	99	63.470	Xiphophorus_couchianus
ENSPEMG00000012082	-	97	63.339	ENSXMAG00000005536	lsg1	99	63.846	Xiphophorus_maculatus