EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPEMG00000012132 (Gene tree)
Gene ID: 102924409
Gene Symbol: -
Alias: -
Full Name: Y-box binding protein 3
Gene Type: protein_coding
Species: Peromyscus_maniculatus_bairdii
Status: putative
Strand: Minus strand
Length: 23636 bases
Position: chrKI616239.1:503619-527254
Accession: 102924409
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPEMP00000011517	CSD	PF00313.22	1.5e-26	1	1
ENSPEMP00000011519	CSD	PF00313.22	2.7e-26	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPEMT00000015704	-	1531	XM_006995684	ENSPEMP00000011517	316 (aa)	XP_006995746	UPI00042ABECE
ENSPEMT00000015706	-	744	-	ENSPEMP00000011519	247 (aa)	-	-

Gene Model

Click here to download ENSPEMG00000012132's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPEMG00000012132's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPEMG00000012132	-	97	45.820	ENSPEMG00000011569	-	93	49.196
ENSPEMG00000012132	-	98	99.585	ENSPEMG00000010391	-	92	99.585

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPEMG00000012132	-	99	87.227	ENSG00000060138	YBX3	91	97.619	Homo_sapiens
ENSPEMG00000012132	-	99	90.506	ENSAMEG00000009393	YBX3	90	91.509	Ailuropoda_melanoleuca
ENSPEMG00000012132	-	86	98.077	ENSAPLG00000003147	YBX3	76	98.077	Anas_platyrhynchos
ENSPEMG00000012132	-	92	91.864	ENSANAG00000024492	-	100	89.557	Aotus_nancymaae
ENSPEMG00000012132	-	90	66.667	ENSANAG00000033366	-	77	79.268	Aotus_nancymaae
ENSPEMG00000012132	-	99	89.905	ENSBTAG00000009663	YBX3	84	87.147	Bos_taurus
ENSPEMG00000012132	-	92	91.525	ENSCJAG00000021660	-	88	89.198	Callithrix_jacchus
ENSPEMG00000012132	-	100	67.068	ENSCJAG00000033824	-	78	83.562	Callithrix_jacchus
ENSPEMG00000012132	-	90	93.380	ENSCAFG00000013401	YBX3	100	93.548	Canis_familiaris
ENSPEMG00000012132	-	92	90.753	ENSCAFG00020006412	YBX3	86	88.820	Canis_lupus_dingo
ENSPEMG00000012132	-	99	89.905	ENSCHIG00000010863	YBX3	89	89.969	Capra_hircus
ENSPEMG00000012132	-	90	93.380	ENSTSYG00000004204	-	96	87.937	Carlito_syrichta
ENSPEMG00000012132	-	99	77.016	ENSTSYG00000035821	-	80	83.051	Carlito_syrichta
ENSPEMG00000012132	-	90	88.112	ENSCAPG00000015039	YBX3	93	88.112	Cavia_aperea
ENSPEMG00000012132	-	92	89.041	ENSCPOG00000011329	YBX3	94	86.435	Cavia_porcellus
ENSPEMG00000012132	-	92	91.186	ENSCCAG00000016469	YBX3	87	88.580	Cebus_capucinus
ENSPEMG00000012132	-	99	86.604	ENSCATG00000034411	YBX3	87	88.580	Cercocebus_atys
ENSPEMG00000012132	-	90	90.210	ENSCLAG00000016030	YBX3	94	90.210	Chinchilla_lanigera
ENSPEMG00000012132	-	99	86.916	ENSCSAG00000008744	YBX3	87	88.889	Chlorocebus_sabaeus
ENSPEMG00000012132	-	88	84.091	ENSCPBG00000014147	YBX3	88	78.165	Chrysemys_picta_bellii
ENSPEMG00000012132	-	67	56.818	ENSCING00000010654	yb1/2/3	56	56.983	Ciona_intestinalis
ENSPEMG00000012132	-	92	91.186	ENSCANG00000036801	YBX3	100	88.889	Colobus_angolensis_palliatus
ENSPEMG00000012132	-	100	99.051	ENSCGRG00001016148	Ybx3	88	99.051	Cricetulus_griseus_chok1gshd
ENSPEMG00000012132	-	90	97.232	ENSCGRG00000004563	Ybx3	98	97.232	Cricetulus_griseus_crigri
ENSPEMG00000012132	-	99	85.669	ENSDORG00000009103	Ybx3	89	86.032	Dipodomys_ordii
ENSPEMG00000012132	-	89	84.615	ENSETEG00000002557	YBX3	99	82.394	Echinops_telfairi
ENSPEMG00000012132	-	99	84.062	ENSEASG00005014726	YBX3	86	86.604	Equus_asinus_asinus
ENSPEMG00000012132	-	99	87.500	ENSECAG00000013777	YBX3	87	90.031	Equus_caballus
ENSPEMG00000012132	-	89	90.845	ENSEEUG00000010415	YBX3	100	91.197	Erinaceus_europaeus
ENSPEMG00000012132	-	99	87.850	ENSFCAG00000027748	YBX3	87	91.331	Felis_catus
ENSPEMG00000012132	-	86	94.444	ENSFALG00000003661	YBX3	71	98.837	Ficedula_albicollis
ENSPEMG00000012132	-	90	85.664	ENSFDAG00000021192	YBX3	92	85.664	Fukomys_damarensis
ENSPEMG00000012132	-	88	83.105	ENSGALG00000031890	YBX3	79	84.746	Gallus_gallus
ENSPEMG00000012132	-	88	80.543	ENSGAGG00000017780	YBX3	85	80.408	Gopherus_agassizii
ENSPEMG00000012132	-	99	87.227	ENSGGOG00000001352	YBX3	87	89.198	Gorilla_gorilla
ENSPEMG00000012132	-	95	77.303	ENSHGLG00000014798	-	90	77.303	Heterocephalus_glaber_female
ENSPEMG00000012132	-	86	80.515	ENSHGLG00000015495	-	88	77.288	Heterocephalus_glaber_female
ENSPEMG00000012132	-	87	91.743	ENSHGLG00100003589	YBX3	87	91.743	Heterocephalus_glaber_male
ENSPEMG00000012132	-	98	85.942	ENSSTOG00000032577	-	89	86.164	Ictidomys_tridecemlineatus
ENSPEMG00000012132	-	90	87.676	ENSSTOG00000002108	-	88	86.014	Ictidomys_tridecemlineatus
ENSPEMG00000012132	-	92	70.408	ENSJJAG00000014239	Ybx3	100	84.375	Jaculus_jaculus
ENSPEMG00000012132	-	92	94.218	ENSLAFG00000017247	YBX3	95	86.875	Loxodonta_africana
ENSPEMG00000012132	-	99	86.916	ENSMFAG00000039369	YBX3	87	88.889	Macaca_fascicularis
ENSPEMG00000012132	-	100	86.728	ENSMMUG00000022469	YBX3	99	88.272	Macaca_mulatta
ENSPEMG00000012132	-	99	86.916	ENSMNEG00000045109	YBX3	87	88.272	Macaca_nemestrina
ENSPEMG00000012132	-	90	91.958	ENSMLEG00000033618	YBX3	81	91.958	Mandrillus_leucophaeus
ENSPEMG00000012132	-	85	98.095	ENSMGAG00000014224	YBX3	93	100.000	Meleagris_gallopavo
ENSPEMG00000012132	-	100	98.418	ENSMAUG00000012185	Ybx3	99	98.418	Mesocricetus_auratus
ENSPEMG00000012132	-	92	95.205	ENSMICG00000038002	-	87	92.857	Microcebus_murinus
ENSPEMG00000012132	-	100	78.313	ENSMICG00000031459	-	88	76.305	Microcebus_murinus
ENSPEMG00000012132	-	98	97.411	ENSMOCG00000016291	Ybx3	100	99.149	Microtus_ochrogaster
ENSPEMG00000012132	-	90	84.266	ENSMODG00000018248	YBX3	91	83.972	Monodelphis_domestica
ENSPEMG00000012132	-	100	97.571	MGP_CAROLIEiJ_G0028947	Ybx3	88	97.468	Mus_caroli
ENSPEMG00000012132	-	100	97.468	ENSMUSG00000030189	Ybx3	88	97.468	Mus_musculus
ENSPEMG00000012132	-	100	98.101	MGP_PahariEiJ_G0022709	Ybx3	88	98.101	Mus_pahari
ENSPEMG00000012132	-	100	97.785	MGP_SPRETEiJ_G0029994	Ybx3	88	97.785	Mus_spretus
ENSPEMG00000012132	-	99	71.125	ENSMPUG00000011810	YBX3	87	75.227	Mustela_putorius_furo
ENSPEMG00000012132	-	83	91.078	ENSMLUG00000007476	YBX3	100	88.848	Myotis_lucifugus
ENSPEMG00000012132	-	92	89.796	ENSNGAG00000000710	Ybx3	100	86.992	Nannospalax_galili
ENSPEMG00000012132	-	99	84.735	ENSNLEG00000034844	YBX3	92	85.494	Nomascus_leucogenys
ENSPEMG00000012132	-	55	78.035	ENSMEUG00000002507	-	81	78.035	Notamacropus_eugenii
ENSPEMG00000012132	-	99	81.505	ENSODEG00000017957	YBX3	94	83.386	Octodon_degus
ENSPEMG00000012132	-	92	88.776	ENSOCUG00000001889	YBX3	88	88.411	Oryctolagus_cuniculus
ENSPEMG00000012132	-	89	98.230	ENSOGAG00000013245	YBX3	87	89.666	Otolemur_garnettii
ENSPEMG00000012132	-	83	98.969	ENSOARG00000020919	YBX3	99	81.605	Ovis_aries
ENSPEMG00000012132	-	92	91.468	ENSPPAG00000039068	YBX3	82	91.892	Pan_paniscus
ENSPEMG00000012132	-	99	88.162	ENSPPRG00000005859	YBX3	87	91.641	Panthera_pardus
ENSPEMG00000012132	-	89	94.014	ENSPTIG00000005322	YBX3	81	93.706	Panthera_tigris_altaica
ENSPEMG00000012132	-	99	87.227	ENSPTRG00000004681	YBX3	87	89.198	Pan_troglodytes
ENSPEMG00000012132	-	99	86.604	ENSPANG00000010280	YBX3	87	88.580	Papio_anubis
ENSPEMG00000012132	-	86	85.581	ENSPSIG00000009247	YBX3	90	100.000	Pelodiscus_sinensis
ENSPEMG00000012132	-	81	81.853	ENSPCIG00000029949	YBX3	100	81.853	Phascolarctos_cinereus
ENSPEMG00000012132	-	99	86.916	ENSPPYG00000004279	YBX3	87	88.889	Pongo_abelii
ENSPEMG00000012132	-	67	93.953	ENSPCAG00000001397	YBX3	82	91.139	Procavia_capensis
ENSPEMG00000012132	-	58	92.350	ENSPCOG00000011663	YBX3	82	88.095	Propithecus_coquereli
ENSPEMG00000012132	-	94	79.333	ENSPVAG00000006740	YBX3	64	94.538	Pteropus_vampyrus
ENSPEMG00000012132	-	100	98.734	ENSRNOG00000005480	Ybx3	88	98.734	Rattus_norvegicus
ENSPEMG00000012132	-	92	91.126	ENSRBIG00000039208	YBX3	87	87.654	Rhinopithecus_bieti
ENSPEMG00000012132	-	99	86.916	ENSRROG00000029638	YBX3	87	88.272	Rhinopithecus_roxellana
ENSPEMG00000012132	-	91	92.042	ENSSBOG00000030573	YBX3	87	89.189	Saimiri_boliviensis_boliviensis
ENSPEMG00000012132	-	79	98.837	ENSSHAG00000003262	YBX3	98	82.474	Sarcophilus_harrisii
ENSPEMG00000012132	-	55	89.928	ENSSPUG00000009911	-	74	84.906	Sphenodon_punctatus
ENSPEMG00000012132	-	99	87.037	ENSSSCG00000000633	YBX3	86	90.798	Sus_scrofa
ENSPEMG00000012132	-	85	97.143	ENSTGUG00000012047	YBX3	75	97.143	Taeniopygia_guttata
ENSPEMG00000012132	-	100	84.969	ENSTBEG00000012570	YBX3	90	85.276	Tupaia_belangeri
ENSPEMG00000012132	-	82	82.707	ENSTTRG00000008045	YBX3	100	83.459	Tursiops_truncatus
ENSPEMG00000012132	-	87	90.614	ENSUAMG00000016662	YBX3	100	90.614	Ursus_americanus
ENSPEMG00000012132	-	89	94.014	ENSUMAG00000016118	YBX3	94	93.706	Ursus_maritimus
ENSPEMG00000012132	-	69	100.000	ENSVPAG00000000876	YBX3	100	70.423	Vicugna_pacos
ENSPEMG00000012132	-	87	89.892	ENSVVUG00000004956	YBX3	100	89.892	Vulpes_vulpes
ENSPEMG00000012132	-	87	72.273	ENSXETG00000016239	ybx3	94	69.787	Xenopus_tropicalis