EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPEMG00000012133 (Gene tree)
Gene ID: 102915017
Gene Symbol: Rad54b
Alias: -
Full Name: RAD54 homolog B
Gene Type: protein_coding
Species: Peromyscus_maniculatus_bairdii
Status: putative
Strand: Plus strand
Length: 88994 bases
Position: chrKI615369.1:7311455-7400448
Accession: 102915017
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPEMP00000011506	ResIII	PF04851.15	7.2e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPEMT00000015693	-	2895	XM_006974939	ENSPEMP00000011506	891 (aa)	XP_006975001	UPI00042ACB23

Gene Model

Click here to download ENSPEMG00000012133's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPEMG00000012133's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPEMG00000012133	Rad54b	59	30.952	ENSPEMG00000021081	-	57	30.952
ENSPEMG00000012133	Rad54b	54	33.632	ENSPEMG00000022358	-	50	33.784
ENSPEMG00000012133	Rad54b	61	31.086	ENSPEMG00000006631	-	67	30.580
ENSPEMG00000012133	Rad54b	56	30.350	ENSPEMG00000013528	Chd1l	50	30.350
ENSPEMG00000012133	Rad54b	71	45.385	ENSPEMG00000011422	Rad54l	82	45.385

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPEMG00000012133	Rad54b	81	83.425	ENSG00000265817	FSBP	99	83.425	Homo_sapiens
ENSPEMG00000012133	Rad54b	99	79.868	ENSG00000197275	RAD54B	99	79.868	Homo_sapiens
ENSPEMG00000012133	Rad54b	100	79.737	ENSAMEG00000005834	-	100	79.737	Ailuropoda_melanoleuca
ENSPEMG00000012133	Rad54b	99	55.333	ENSACIG00000013005	rad54b	99	55.333	Amphilophus_citrinellus
ENSPEMG00000012133	Rad54b	99	54.185	ENSAOCG00000008523	rad54b	99	54.234	Amphiprion_ocellaris
ENSPEMG00000012133	Rad54b	99	54.454	ENSAPEG00000001673	rad54b	99	54.556	Amphiprion_percula
ENSPEMG00000012133	Rad54b	99	54.828	ENSATEG00000001527	rad54b	99	54.828	Anabas_testudineus
ENSPEMG00000012133	Rad54b	99	67.172	ENSAPLG00000014366	-	99	67.172	Anas_platyrhynchos
ENSPEMG00000012133	Rad54b	89	69.549	ENSACAG00000003671	-	99	69.549	Anolis_carolinensis
ENSPEMG00000012133	Rad54b	73	82.562	ENSANAG00000019528	-	99	82.562	Aotus_nancymaae
ENSPEMG00000012133	Rad54b	99	55.011	ENSACLG00000007826	rad54b	99	55.011	Astatotilapia_calliptera
ENSPEMG00000012133	Rad54b	87	57.975	ENSAMXG00000039985	rad54b	94	57.716	Astyanax_mexicanus
ENSPEMG00000012133	Rad54b	100	77.193	ENSBTAG00000000632	RAD54B	100	77.193	Bos_taurus
ENSPEMG00000012133	Rad54b	81	35.925	WBGene00013792	Y116A8C.13	98	33.487	Caenorhabditis_elegans
ENSPEMG00000012133	Rad54b	99	78.438	ENSCJAG00000000080	-	99	81.906	Callithrix_jacchus
ENSPEMG00000012133	Rad54b	100	77.218	ENSCAFG00000009179	RAD54B	99	77.218	Canis_familiaris
ENSPEMG00000012133	Rad54b	100	77.108	ENSCAFG00020012084	-	99	77.108	Canis_lupus_dingo
ENSPEMG00000012133	Rad54b	100	77.303	ENSCHIG00000008230	-	100	77.303	Capra_hircus
ENSPEMG00000012133	Rad54b	100	79.628	ENSTSYG00000013234	-	100	79.628	Carlito_syrichta
ENSPEMG00000012133	Rad54b	100	78.690	ENSCPOG00000011643	-	99	78.690	Cavia_porcellus
ENSPEMG00000012133	Rad54b	99	78.658	ENSCCAG00000011754	-	99	81.931	Cebus_capucinus
ENSPEMG00000012133	Rad54b	99	79.868	ENSCATG00000030661	-	99	83.840	Cercocebus_atys
ENSPEMG00000012133	Rad54b	99	81.102	ENSCLAG00000010476	-	99	81.102	Chinchilla_lanigera
ENSPEMG00000012133	Rad54b	99	79.978	ENSCSAG00000012712	-	99	79.978	Chlorocebus_sabaeus
ENSPEMG00000012133	Rad54b	99	66.522	ENSCPBG00000003204	-	99	67.254	Chrysemys_picta_bellii
ENSPEMG00000012133	Rad54b	99	80.418	ENSCANG00000017939	-	99	84.254	Colobus_angolensis_palliatus
ENSPEMG00000012133	Rad54b	100	89.226	ENSCGRG00001020184	Rad54b	100	89.226	Cricetulus_griseus_chok1gshd
ENSPEMG00000012133	Rad54b	100	87.305	ENSCGRG00000016752	Rad54b	100	87.305	Cricetulus_griseus_crigri
ENSPEMG00000012133	Rad54b	99	54.770	ENSCSEG00000001601	rad54b	99	54.770	Cynoglossus_semilaevis
ENSPEMG00000012133	Rad54b	99	56.656	ENSCVAG00000009200	rad54b	99	56.656	Cyprinodon_variegatus
ENSPEMG00000012133	Rad54b	100	51.934	ENSDARG00000092134	rad54b	100	58.679	Danio_rerio
ENSPEMG00000012133	Rad54b	99	75.602	ENSDNOG00000015535	-	99	75.602	Dasypus_novemcinctus
ENSPEMG00000012133	Rad54b	100	80.359	ENSDORG00000002492	Rad54b	100	80.584	Dipodomys_ordii
ENSPEMG00000012133	Rad54b	86	76.786	ENSETEG00000010605	-	100	76.786	Echinops_telfairi
ENSPEMG00000012133	Rad54b	99	45.793	ENSEBUG00000009104	rad54b	99	45.793	Eptatretus_burgeri
ENSPEMG00000012133	Rad54b	97	78.143	ENSEASG00005004021	-	99	78.143	Equus_asinus_asinus
ENSPEMG00000012133	Rad54b	100	78.595	ENSECAG00000021949	-	99	78.595	Equus_caballus
ENSPEMG00000012133	Rad54b	81	80.745	ENSEEUG00000008056	-	80	80.745	Erinaceus_europaeus
ENSPEMG00000012133	Rad54b	99	53.560	ENSELUG00000009287	rad54b	99	53.666	Esox_lucius
ENSPEMG00000012133	Rad54b	100	79.189	ENSFCAG00000015513	-	100	83.219	Felis_catus
ENSPEMG00000012133	Rad54b	99	64.956	ENSFALG00000005467	-	99	64.956	Ficedula_albicollis
ENSPEMG00000012133	Rad54b	99	79.075	ENSFDAG00000020541	-	99	79.075	Fukomys_damarensis
ENSPEMG00000012133	Rad54b	88	58.764	ENSFHEG00000014382	rad54b	87	58.890	Fundulus_heteroclitus
ENSPEMG00000012133	Rad54b	88	56.571	ENSGMOG00000014774	rad54b	98	56.571	Gadus_morhua
ENSPEMG00000012133	Rad54b	99	66.703	ENSGALG00000043597	RAD54B	99	66.703	Gallus_gallus
ENSPEMG00000012133	Rad54b	99	56.062	ENSGAFG00000007901	rad54b	99	56.062	Gambusia_affinis
ENSPEMG00000012133	Rad54b	99	53.614	ENSGACG00000009128	rad54b	100	53.614	Gasterosteus_aculeatus
ENSPEMG00000012133	Rad54b	100	66.197	ENSGAGG00000018747	-	99	66.197	Gopherus_agassizii
ENSPEMG00000012133	Rad54b	100	79.605	ENSGGOG00000023516	-	100	79.605	Gorilla_gorilla
ENSPEMG00000012133	Rad54b	99	52.972	ENSHBUG00000016017	rad54b	99	52.760	Haplochromis_burtoni
ENSPEMG00000012133	Rad54b	100	78.190	ENSHGLG00000008263	RAD54B	99	78.190	Heterocephalus_glaber_female
ENSPEMG00000012133	Rad54b	100	77.356	ENSHGLG00100008108	-	99	77.356	Heterocephalus_glaber_male
ENSPEMG00000012133	Rad54b	99	53.260	ENSHCOG00000004764	rad54b	100	53.260	Hippocampus_comes
ENSPEMG00000012133	Rad54b	100	51.688	ENSIPUG00000018531	rad54b	99	51.688	Ictalurus_punctatus
ENSPEMG00000012133	Rad54b	99	79.134	ENSSTOG00000010791	-	99	79.134	Ictidomys_tridecemlineatus
ENSPEMG00000012133	Rad54b	100	80.900	ENSJJAG00000010314	Rad54b	100	80.900	Jaculus_jaculus
ENSPEMG00000012133	Rad54b	99	53.803	ENSKMAG00000004744	rad54b	99	53.803	Kryptolebias_marmoratus
ENSPEMG00000012133	Rad54b	83	68.302	ENSLACG00000000859	-	100	68.302	Latimeria_chalumnae
ENSPEMG00000012133	Rad54b	89	63.283	ENSLOCG00000010100	rad54b	93	63.590	Lepisosteus_oculatus
ENSPEMG00000012133	Rad54b	91	79.357	ENSLAFG00000015315	-	100	79.357	Loxodonta_africana
ENSPEMG00000012133	Rad54b	99	79.978	ENSMFAG00000031629	-	99	83.840	Macaca_fascicularis
ENSPEMG00000012133	Rad54b	99	79.978	ENSMMUG00000005659	-	99	79.978	Macaca_mulatta
ENSPEMG00000012133	Rad54b	99	80.066	ENSMNEG00000016408	-	99	80.066	Macaca_nemestrina
ENSPEMG00000012133	Rad54b	99	79.978	ENSMLEG00000006946	-	99	79.978	Mandrillus_leucophaeus
ENSPEMG00000012133	Rad54b	99	55.507	ENSMAMG00000012269	rad54b	99	55.507	Mastacembelus_armatus
ENSPEMG00000012133	Rad54b	99	52.972	ENSMZEG00005005281	rad54b	95	58.816	Maylandia_zebra
ENSPEMG00000012133	Rad54b	99	66.484	ENSMGAG00000012024	-	99	66.484	Meleagris_gallopavo
ENSPEMG00000012133	Rad54b	100	88.777	ENSMAUG00000013586	Rad54b	100	88.777	Mesocricetus_auratus
ENSPEMG00000012133	Rad54b	99	78.723	ENSMICG00000000754	-	99	78.723	Microcebus_murinus
ENSPEMG00000012133	Rad54b	100	87.879	ENSMOCG00000020035	Rad54b	99	87.879	Microtus_ochrogaster
ENSPEMG00000012133	Rad54b	99	54.535	ENSMMOG00000003394	rad54b	99	54.535	Mola_mola
ENSPEMG00000012133	Rad54b	90	75.652	ENSMODG00000007343	-	99	75.652	Monodelphis_domestica
ENSPEMG00000012133	Rad54b	72	59.161	ENSMALG00000001520	rad54b	99	59.161	Monopterus_albus
ENSPEMG00000012133	Rad54b	100	85.859	MGP_CAROLIEiJ_G0025810	Rad54b	100	85.859	Mus_caroli
ENSPEMG00000012133	Rad54b	100	85.746	ENSMUSG00000078773	Rad54b	100	85.746	Mus_musculus
ENSPEMG00000012133	Rad54b	100	85.746	MGP_PahariEiJ_G0023933	Rad54b	100	85.746	Mus_pahari
ENSPEMG00000012133	Rad54b	100	85.971	MGP_SPRETEiJ_G0026758	Rad54b	100	85.971	Mus_spretus
ENSPEMG00000012133	Rad54b	91	81.504	ENSMPUG00000008878	-	100	81.504	Mustela_putorius_furo
ENSPEMG00000012133	Rad54b	99	78.180	ENSMLUG00000008953	-	99	78.180	Myotis_lucifugus
ENSPEMG00000012133	Rad54b	100	84.257	ENSNGAG00000017537	Rad54b	100	84.257	Nannospalax_galili
ENSPEMG00000012133	Rad54b	99	55.568	ENSNBRG00000013394	rad54b	99	55.568	Neolamprologus_brichardi
ENSPEMG00000012133	Rad54b	99	80.088	ENSNLEG00000003062	-	99	83.149	Nomascus_leucogenys
ENSPEMG00000012133	Rad54b	73	71.891	ENSMEUG00000012426	-	71	71.891	Notamacropus_eugenii
ENSPEMG00000012133	Rad54b	100	77.876	ENSODEG00000019564	-	100	77.876	Octodon_degus
ENSPEMG00000012133	Rad54b	81	82.462	ENSODEG00000002650	-	96	82.462	Octodon_degus
ENSPEMG00000012133	Rad54b	99	54.664	ENSONIG00000006067	rad54b	99	54.664	Oreochromis_niloticus
ENSPEMG00000012133	Rad54b	84	72.679	ENSOANG00000011348	-	100	72.679	Ornithorhynchus_anatinus
ENSPEMG00000012133	Rad54b	100	77.827	ENSOCUG00000016478	-	99	77.827	Oryctolagus_cuniculus
ENSPEMG00000012133	Rad54b	99	54.149	ENSORLG00000008918	rad54b	99	62.112	Oryzias_latipes
ENSPEMG00000012133	Rad54b	72	62.112	ENSORLG00020012171	rad54b	99	62.112	Oryzias_latipes_hni
ENSPEMG00000012133	Rad54b	99	54.207	ENSORLG00015018536	rad54b	99	54.207	Oryzias_latipes_hsok
ENSPEMG00000012133	Rad54b	86	59.638	ENSOMEG00000004345	rad54b	99	59.638	Oryzias_melastigma
ENSPEMG00000012133	Rad54b	99	77.936	ENSOGAG00000007854	-	99	77.936	Otolemur_garnettii
ENSPEMG00000012133	Rad54b	91	81.181	ENSOARG00000007691	-	100	81.181	Ovis_aries
ENSPEMG00000012133	Rad54b	99	78.218	ENSPPAG00000029572	-	99	78.218	Pan_paniscus
ENSPEMG00000012133	Rad54b	100	79.409	ENSPPRG00000007571	-	100	83.356	Panthera_pardus
ENSPEMG00000012133	Rad54b	81	83.356	ENSPTIG00000012670	-	100	83.356	Panthera_tigris_altaica
ENSPEMG00000012133	Rad54b	99	79.648	ENSPTRG00000020427	-	99	83.287	Pan_troglodytes
ENSPEMG00000012133	Rad54b	99	80.088	ENSPANG00000019566	-	99	80.088	Papio_anubis
ENSPEMG00000012133	Rad54b	99	57.002	ENSPKIG00000014974	rad54b	99	57.002	Paramormyrops_kingsleyae
ENSPEMG00000012133	Rad54b	99	64.776	ENSPSIG00000002383	-	98	69.240	Pelodiscus_sinensis
ENSPEMG00000012133	Rad54b	88	57.286	ENSPMAG00000002916	rad54b	98	57.663	Petromyzon_marinus
ENSPEMG00000012133	Rad54b	91	74.815	ENSPCIG00000020151	-	94	75.031	Phascolarctos_cinereus
ENSPEMG00000012133	Rad54b	99	54.863	ENSPFOG00000023411	rad54b	99	54.863	Poecilia_formosa
ENSPEMG00000012133	Rad54b	99	55.074	ENSPLAG00000010430	rad54b	99	55.074	Poecilia_latipinna
ENSPEMG00000012133	Rad54b	99	56.125	ENSPMEG00000016873	rad54b	99	56.125	Poecilia_mexicana
ENSPEMG00000012133	Rad54b	99	57.397	ENSPREG00000018443	rad54b	99	57.397	Poecilia_reticulata
ENSPEMG00000012133	Rad54b	99	79.648	ENSPPYG00000018750	-	99	79.648	Pongo_abelii
ENSPEMG00000012133	Rad54b	99	80.022	ENSPCOG00000026845	-	99	83.196	Propithecus_coquereli
ENSPEMG00000012133	Rad54b	83	81.536	ENSPVAG00000000261	-	86	81.536	Pteropus_vampyrus
ENSPEMG00000012133	Rad54b	88	58.291	ENSPNYG00000018303	rad54b	96	58.291	Pundamilia_nyererei
ENSPEMG00000012133	Rad54b	99	53.813	ENSPNAG00000000295	rad54b	99	53.813	Pygocentrus_nattereri
ENSPEMG00000012133	Rad54b	100	83.502	ENSRNOG00000039949	Rad54b	100	83.502	Rattus_norvegicus
ENSPEMG00000012133	Rad54b	99	79.868	ENSRBIG00000020419	-	99	79.868	Rhinopithecus_bieti
ENSPEMG00000012133	Rad54b	99	79.868	ENSRROG00000039897	-	99	79.868	Rhinopithecus_roxellana
ENSPEMG00000012133	Rad54b	79	37.852	YBR073W	RDH54	65	41.385	Saccharomyces_cerevisiae
ENSPEMG00000012133	Rad54b	99	78.375	ENSSBOG00000028501	-	99	78.375	Saimiri_boliviensis_boliviensis
ENSPEMG00000012133	Rad54b	99	70.350	ENSSHAG00000017038	-	99	70.350	Sarcophilus_harrisii
ENSPEMG00000012133	Rad54b	64	64.965	ENSSFOG00015008483	rad54b	88	64.965	Scleropages_formosus
ENSPEMG00000012133	Rad54b	99	54.709	ENSSMAG00000018659	rad54b	99	54.821	Scophthalmus_maximus
ENSPEMG00000012133	Rad54b	93	59.137	ENSSDUG00000001122	rad54b	98	53.185	Seriola_dumerili
ENSPEMG00000012133	Rad54b	93	59.217	ENSSLDG00000013787	rad54b	99	53.277	Seriola_lalandi_dorsalis
ENSPEMG00000012133	Rad54b	99	66.330	ENSSPUG00000016497	-	99	66.330	Sphenodon_punctatus
ENSPEMG00000012133	Rad54b	99	55.494	ENSSPAG00000012800	rad54b	99	55.494	Stegastes_partitus
ENSPEMG00000012133	Rad54b	99	78.232	ENSSSCG00000006101	-	99	82.478	Sus_scrofa
ENSPEMG00000012133	Rad54b	99	64.770	ENSTGUG00000011880	-	99	64.770	Taeniopygia_guttata
ENSPEMG00000012133	Rad54b	88	59.316	ENSTRUG00000010015	rad54b	99	53.545	Takifugu_rubripes
ENSPEMG00000012133	Rad54b	100	75.000	ENSTTRG00000006312	-	100	75.000	Tursiops_truncatus
ENSPEMG00000012133	Rad54b	100	78.970	ENSUMAG00000016401	-	100	78.970	Ursus_maritimus
ENSPEMG00000012133	Rad54b	100	77.143	ENSVPAG00000003157	-	100	77.143	Vicugna_pacos
ENSPEMG00000012133	Rad54b	99	53.548	ENSXETG00000025924	rad54b	99	57.410	Xenopus_tropicalis
ENSPEMG00000012133	Rad54b	99	56.236	ENSXMAG00000013141	rad54b	99	56.236	Xiphophorus_maculatus