EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: ENSPEMG00000012225 (Gene tree)
Gene ID: 102925099
Gene Symbol: Snai3
Alias: -
Full Name: snail family transcriptional repressor 3
Gene Type: protein_coding
Species: Peromyscus_maniculatus_bairdii
Status: putative
Strand: Minus strand
Length: 8660 bases
Position: chrKI615644.1:258425-267084
Accession: 102925099
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPEMP00000011630	zf-C2H2	PF00096.26	6.2e-25	1	4
ENSPEMP00000011630	zf-C2H2	PF00096.26	6.2e-25	2	4
ENSPEMP00000011630	zf-C2H2	PF00096.26	6.2e-25	3	4
ENSPEMP00000011630	zf-C2H2	PF00096.26	6.2e-25	4	4
ENSPEMP00000011630	zf-met	PF12874.7	1.3e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPEMT00000015820	-	3409	XM_006987387	ENSPEMP00000011630	287 (aa)	XP_006987449	UPI00042AE506

Gene Model

Click here to download ENSPEMG00000012225's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPEMG00000012225's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPEMG00000012225	Snai3	55	41.606	ENSPEMG00000016757	Zfp408	50	41.606
ENSPEMG00000012225	Snai3	55	42.105	ENSPEMG00000023883	-	69	42.105
ENSPEMG00000012225	Snai3	54	43.421	ENSPEMG00000020736	Zfp672	89	43.421
ENSPEMG00000012225	Snai3	72	40.659	ENSPEMG00000014980	Zfp64	60	40.659
ENSPEMG00000012225	Snai3	53	43.396	ENSPEMG00000024167	Zfp354a	66	43.396
ENSPEMG00000012225	Snai3	71	41.772	ENSPEMG00000000870	Repin1	71	41.772
ENSPEMG00000012225	Snai3	53	44.444	ENSPEMG00000007237	Zfp865	59	44.444
ENSPEMG00000012225	Snai3	100	40.523	ENSPEMG00000023213	Snai1	99	41.176
ENSPEMG00000012225	Snai3	74	37.313	ENSPEMG00000010242	-	61	37.313
ENSPEMG00000012225	Snai3	93	39.259	ENSPEMG00000008173	-	93	39.259
ENSPEMG00000012225	Snai3	54	41.096	ENSPEMG00000023329	-	74	41.096
ENSPEMG00000012225	Snai3	52	44.776	ENSPEMG00000000403	-	61	44.776
ENSPEMG00000012225	Snai3	99	49.650	ENSPEMG00000011739	Snai2	99	48.601
ENSPEMG00000012225	Snai3	52	46.429	ENSPEMG00000007461	-	85	46.429
ENSPEMG00000012225	Snai3	52	47.297	ENSPEMG00000021548	Zfp712	87	47.297
ENSPEMG00000012225	Snai3	69	36.232	ENSPEMG00000008817	-	87	36.232
ENSPEMG00000012225	Snai3	52	36.296	ENSPEMG00000007241	-	73	36.296
ENSPEMG00000012225	Snai3	61	42.963	ENSPEMG00000016507	Zfp26	72	42.963
ENSPEMG00000012225	Snai3	50	50.000	ENSPEMG00000016975	Zfp940	56	50.000
ENSPEMG00000012225	Snai3	57	39.706	ENSPEMG00000017339	2610008E11Rik	59	39.706
ENSPEMG00000012225	Snai3	56	42.466	ENSPEMG00000021937	-	80	42.466
ENSPEMG00000012225	Snai3	67	48.193	ENSPEMG00000022834	Zfp709	76	48.193
ENSPEMG00000012225	Snai3	69	37.931	ENSPEMG00000011776	-	74	37.931
ENSPEMG00000012225	Snai3	60	44.762	ENSPEMG00000022945	-	75	44.762
ENSPEMG00000012225	Snai3	51	38.346	ENSPEMG00000023566	Zfp768	60	37.500