EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPEMG00000012241 (Gene tree)
Gene ID: 102922528
Gene Symbol: Ddb1
Alias: -
Full Name: damage specific DNA binding protein 1
Gene Type: protein_coding
Species: Peromyscus_maniculatus_bairdii
Status: putative
Strand: Minus strand
Length: 26972 bases
Position: chrKI616004.1:625780-652751
Accession: 102922528
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPEMP00000011695	CPSF_A	PF03178.15	4.5e-86	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPEMT00000015885	-	4237	XM_006993844	ENSPEMP00000011695	1140 (aa)	XP_006993906	UPI000228D6BD

Gene Model

Click here to download ENSPEMG00000012241's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPEMG00000012241's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPEMG00000012241	Ddb1	100	99.825	ENSG00000167986	DDB1	100	100.000	Homo_sapiens
ENSPEMG00000012241	Ddb1	98	91.465	ENSAPOG00000005036	ddb1	99	91.531	Acanthochromis_polyacanthus
ENSPEMG00000012241	Ddb1	100	99.912	ENSAMEG00000016518	DDB1	100	99.912	Ailuropoda_melanoleuca
ENSPEMG00000012241	Ddb1	86	91.837	ENSACIG00000020624	ddb1	99	91.837	Amphilophus_citrinellus
ENSPEMG00000012241	Ddb1	100	91.140	ENSAOCG00000003066	ddb1	100	91.140	Amphiprion_ocellaris
ENSPEMG00000012241	Ddb1	100	91.228	ENSAPEG00000000092	ddb1	100	91.228	Amphiprion_percula
ENSPEMG00000012241	Ddb1	94	91.721	ENSATEG00000020571	ddb1	97	91.721	Anabas_testudineus
ENSPEMG00000012241	Ddb1	98	96.533	ENSAPLG00000007174	DDB1	99	96.533	Anas_platyrhynchos
ENSPEMG00000012241	Ddb1	100	97.018	ENSACAG00000017758	DDB1	100	97.018	Anolis_carolinensis
ENSPEMG00000012241	Ddb1	100	99.825	ENSANAG00000021878	DDB1	100	99.825	Aotus_nancymaae
ENSPEMG00000012241	Ddb1	100	91.491	ENSACLG00000012401	ddb1	100	91.491	Astatotilapia_calliptera
ENSPEMG00000012241	Ddb1	100	99.737	ENSBTAG00000021569	DDB1	93	99.737	Bos_taurus
ENSPEMG00000012241	Ddb1	100	37.211	WBGene00010890	ddb-1	100	37.126	Caenorhabditis_elegans
ENSPEMG00000012241	Ddb1	100	99.825	ENSCJAG00000019319	DDB1	100	99.825	Callithrix_jacchus
ENSPEMG00000012241	Ddb1	100	99.912	ENSCAFG00000016264	DDB1	100	99.912	Canis_familiaris
ENSPEMG00000012241	Ddb1	94	99.628	ENSCAFG00020012722	DDB1	99	99.628	Canis_lupus_dingo
ENSPEMG00000012241	Ddb1	100	99.737	ENSCHIG00000014969	DDB1	100	99.737	Capra_hircus
ENSPEMG00000012241	Ddb1	100	99.298	ENSTSYG00000008027	DDB1	100	99.298	Carlito_syrichta
ENSPEMG00000012241	Ddb1	98	99.285	ENSCAPG00000010786	DDB1	100	99.285	Cavia_aperea
ENSPEMG00000012241	Ddb1	100	99.298	ENSCPOG00000009956	DDB1	100	99.298	Cavia_porcellus
ENSPEMG00000012241	Ddb1	100	99.825	ENSCCAG00000035883	DDB1	100	99.825	Cebus_capucinus
ENSPEMG00000012241	Ddb1	100	97.309	ENSCATG00000044495	DDB1	100	97.309	Cercocebus_atys
ENSPEMG00000012241	Ddb1	100	99.386	ENSCLAG00000004126	DDB1	100	99.386	Chinchilla_lanigera
ENSPEMG00000012241	Ddb1	100	99.825	ENSCSAG00000006392	DDB1	100	99.825	Chlorocebus_sabaeus
ENSPEMG00000012241	Ddb1	88	92.803	ENSCHOG00000011377	DDB1	90	92.803	Choloepus_hoffmanni
ENSPEMG00000012241	Ddb1	100	97.719	ENSCPBG00000017728	DDB1	100	97.719	Chrysemys_picta_bellii
ENSPEMG00000012241	Ddb1	100	61.979	ENSCING00000007437	-	100	61.892	Ciona_intestinalis
ENSPEMG00000012241	Ddb1	94	60.276	ENSCSAVG00000004783	-	100	60.276	Ciona_savignyi
ENSPEMG00000012241	Ddb1	100	99.825	ENSCANG00000019948	DDB1	100	99.825	Colobus_angolensis_palliatus
ENSPEMG00000012241	Ddb1	100	100.000	ENSCGRG00001016599	Ddb1	100	100.000	Cricetulus_griseus_chok1gshd
ENSPEMG00000012241	Ddb1	100	100.000	ENSCGRG00000013427	Ddb1	100	100.000	Cricetulus_griseus_crigri
ENSPEMG00000012241	Ddb1	93	91.235	ENSCSEG00000012499	ddb1	99	89.676	Cynoglossus_semilaevis
ENSPEMG00000012241	Ddb1	94	91.426	ENSCVAG00000019531	ddb1	99	91.426	Cyprinodon_variegatus
ENSPEMG00000012241	Ddb1	100	88.441	ENSDARG00000074431	ddb1	100	88.559	Danio_rerio
ENSPEMG00000012241	Ddb1	94	99.256	ENSDNOG00000014884	DDB1	97	99.256	Dasypus_novemcinctus
ENSPEMG00000012241	Ddb1	84	100.000	ENSDORG00000000127	Ddb1	100	100.000	Dipodomys_ordii
ENSPEMG00000012241	Ddb1	100	61.048	FBgn0260962	pic	100	60.839	Drosophila_melanogaster
ENSPEMG00000012241	Ddb1	71	100.000	ENSETEG00000001053	-	71	100.000	Echinops_telfairi
ENSPEMG00000012241	Ddb1	78	84.927	ENSEBUG00000014593	ddb1	97	84.927	Eptatretus_burgeri
ENSPEMG00000012241	Ddb1	100	99.737	ENSEASG00005008184	DDB1	100	99.737	Equus_asinus_asinus
ENSPEMG00000012241	Ddb1	100	99.649	ENSECAG00000012136	DDB1	100	99.649	Equus_caballus
ENSPEMG00000012241	Ddb1	85	97.643	ENSEEUG00000003194	DDB1	85	97.643	Erinaceus_europaeus
ENSPEMG00000012241	Ddb1	100	91.228	ENSELUG00000023868	ddb1	100	91.228	Esox_lucius
ENSPEMG00000012241	Ddb1	100	99.912	ENSFCAG00000029716	DDB1	100	99.912	Felis_catus
ENSPEMG00000012241	Ddb1	100	96.938	ENSFALG00000011981	DDB1	100	96.938	Ficedula_albicollis
ENSPEMG00000012241	Ddb1	100	99.298	ENSFDAG00000005128	DDB1	100	99.298	Fukomys_damarensis
ENSPEMG00000012241	Ddb1	90	90.588	ENSFHEG00000022133	ddb1	98	90.670	Fundulus_heteroclitus
ENSPEMG00000012241	Ddb1	79	94.649	ENSGMOG00000019386	ddb1	94	94.649	Gadus_morhua
ENSPEMG00000012241	Ddb1	100	97.105	ENSGALG00000042333	DDB1	100	97.105	Gallus_gallus
ENSPEMG00000012241	Ddb1	94	91.240	ENSGAFG00000013142	ddb1	99	91.240	Gambusia_affinis
ENSPEMG00000012241	Ddb1	96	90.651	ENSGACG00000017182	ddb1	100	90.651	Gasterosteus_aculeatus
ENSPEMG00000012241	Ddb1	95	97.786	ENSGAGG00000014124	DDB1	100	97.786	Gopherus_agassizii
ENSPEMG00000012241	Ddb1	100	99.825	ENSGGOG00000004052	DDB1	100	99.825	Gorilla_gorilla
ENSPEMG00000012241	Ddb1	100	91.491	ENSHBUG00000008873	ddb1	100	91.491	Haplochromis_burtoni
ENSPEMG00000012241	Ddb1	100	99.211	ENSHGLG00000018430	DDB1	100	99.211	Heterocephalus_glaber_female
ENSPEMG00000012241	Ddb1	100	98.158	ENSHGLG00100014475	DDB1	100	98.158	Heterocephalus_glaber_male
ENSPEMG00000012241	Ddb1	94	90.985	ENSHCOG00000018670	ddb1	98	90.985	Hippocampus_comes
ENSPEMG00000012241	Ddb1	100	90.526	ENSIPUG00000005612	DDB1	100	90.526	Ictalurus_punctatus
ENSPEMG00000012241	Ddb1	100	99.825	ENSSTOG00000007552	DDB1	100	99.825	Ictidomys_tridecemlineatus
ENSPEMG00000012241	Ddb1	100	99.649	ENSJJAG00000017769	Ddb1	100	99.649	Jaculus_jaculus
ENSPEMG00000012241	Ddb1	94	91.333	ENSKMAG00000002315	ddb1	99	91.333	Kryptolebias_marmoratus
ENSPEMG00000012241	Ddb1	85	91.503	ENSLBEG00000017065	ddb1	99	91.503	Labrus_bergylta
ENSPEMG00000012241	Ddb1	100	93.608	ENSLACG00000017611	DDB1	100	93.608	Latimeria_chalumnae
ENSPEMG00000012241	Ddb1	92	83.333	ENSLOCG00000000012	ddb1	100	83.333	Lepisosteus_oculatus
ENSPEMG00000012241	Ddb1	100	99.649	ENSLAFG00000011513	DDB1	100	99.649	Loxodonta_africana
ENSPEMG00000012241	Ddb1	100	99.825	ENSMFAG00000042035	DDB1	100	99.825	Macaca_fascicularis
ENSPEMG00000012241	Ddb1	99	99.823	ENSMMUG00000002691	DDB1	99	99.823	Macaca_mulatta
ENSPEMG00000012241	Ddb1	100	99.825	ENSMNEG00000031559	DDB1	100	99.825	Macaca_nemestrina
ENSPEMG00000012241	Ddb1	100	99.825	ENSMLEG00000044136	DDB1	100	99.825	Mandrillus_leucophaeus
ENSPEMG00000012241	Ddb1	100	91.491	ENSMAMG00000014372	ddb1	100	91.491	Mastacembelus_armatus
ENSPEMG00000012241	Ddb1	100	91.404	ENSMZEG00005013835	ddb1	100	91.404	Maylandia_zebra
ENSPEMG00000012241	Ddb1	94	96.462	ENSMGAG00000004990	DDB1	100	96.462	Meleagris_gallopavo
ENSPEMG00000012241	Ddb1	100	100.000	ENSMAUG00000012926	Ddb1	100	100.000	Mesocricetus_auratus
ENSPEMG00000012241	Ddb1	100	99.825	ENSMICG00000013703	DDB1	100	99.825	Microcebus_murinus
ENSPEMG00000012241	Ddb1	100	99.737	ENSMOCG00000020499	Ddb1	100	99.737	Microtus_ochrogaster
ENSPEMG00000012241	Ddb1	86	91.837	ENSMMOG00000001758	ddb1	99	91.837	Mola_mola
ENSPEMG00000012241	Ddb1	100	89.273	ENSMODG00000020353	DDB1	100	89.273	Monodelphis_domestica
ENSPEMG00000012241	Ddb1	100	91.491	ENSMALG00000014071	ddb1	100	91.491	Monopterus_albus
ENSPEMG00000012241	Ddb1	100	99.912	MGP_CAROLIEiJ_G0022695	Ddb1	100	99.912	Mus_caroli
ENSPEMG00000012241	Ddb1	100	99.737	ENSMUSG00000024740	Ddb1	100	99.737	Mus_musculus
ENSPEMG00000012241	Ddb1	100	99.912	MGP_PahariEiJ_G0014189	Ddb1	100	99.912	Mus_pahari
ENSPEMG00000012241	Ddb1	100	99.825	MGP_SPRETEiJ_G0023609	Ddb1	100	99.825	Mus_spretus
ENSPEMG00000012241	Ddb1	100	96.579	ENSMPUG00000014200	DDB1	100	96.579	Mustela_putorius_furo
ENSPEMG00000012241	Ddb1	100	99.386	ENSMLUG00000013232	DDB1	100	99.386	Myotis_lucifugus
ENSPEMG00000012241	Ddb1	100	99.561	ENSNGAG00000009384	Ddb1	100	99.561	Nannospalax_galili
ENSPEMG00000012241	Ddb1	100	91.579	ENSNBRG00000019581	ddb1	100	91.579	Neolamprologus_brichardi
ENSPEMG00000012241	Ddb1	100	96.701	ENSNLEG00000002022	DDB1	100	96.701	Nomascus_leucogenys
ENSPEMG00000012241	Ddb1	91	99.648	ENSMEUG00000001099	DDB1	93	99.648	Notamacropus_eugenii
ENSPEMG00000012241	Ddb1	90	91.174	ENSOPRG00000008254	DDB1	90	91.174	Ochotona_princeps
ENSPEMG00000012241	Ddb1	100	99.211	ENSODEG00000002419	DDB1	100	99.211	Octodon_degus
ENSPEMG00000012241	Ddb1	100	91.491	ENSONIG00000005804	ddb1	100	91.491	Oreochromis_niloticus
ENSPEMG00000012241	Ddb1	91	98.062	ENSOANG00000004897	DDB1	100	98.062	Ornithorhynchus_anatinus
ENSPEMG00000012241	Ddb1	100	99.825	ENSOCUG00000001667	DDB1	100	99.825	Oryctolagus_cuniculus
ENSPEMG00000012241	Ddb1	96	89.918	ENSORLG00000001399	ddb1	98	91.162	Oryzias_latipes
ENSPEMG00000012241	Ddb1	96	89.826	ENSORLG00020001277	ddb1	97	89.826	Oryzias_latipes_hni
ENSPEMG00000012241	Ddb1	94	90.977	ENSORLG00015002080	ddb1	99	90.977	Oryzias_latipes_hsok
ENSPEMG00000012241	Ddb1	96	89.790	ENSOMEG00000006181	ddb1	99	89.790	Oryzias_melastigma
ENSPEMG00000012241	Ddb1	100	99.649	ENSOGAG00000016103	DDB1	100	99.649	Otolemur_garnettii
ENSPEMG00000012241	Ddb1	99	99.733	ENSOARG00000011716	DDB1	98	99.733	Ovis_aries
ENSPEMG00000012241	Ddb1	100	99.825	ENSPPAG00000035343	DDB1	100	99.825	Pan_paniscus
ENSPEMG00000012241	Ddb1	100	99.912	ENSPPRG00000013300	DDB1	100	99.912	Panthera_pardus
ENSPEMG00000012241	Ddb1	98	99.911	ENSPTIG00000006909	DDB1	98	99.911	Panthera_tigris_altaica
ENSPEMG00000012241	Ddb1	100	99.825	ENSPTRG00000003737	DDB1	100	99.825	Pan_troglodytes
ENSPEMG00000012241	Ddb1	100	99.825	ENSPANG00000000242	DDB1	100	99.825	Papio_anubis
ENSPEMG00000012241	Ddb1	94	91.333	ENSPKIG00000019213	ddb1	94	91.333	Paramormyrops_kingsleyae
ENSPEMG00000012241	Ddb1	98	97.064	ENSPSIG00000013275	DDB1	100	97.064	Pelodiscus_sinensis
ENSPEMG00000012241	Ddb1	86	91.531	ENSPMGG00000021179	ddb1	99	91.531	Periophthalmus_magnuspinnatus
ENSPEMG00000012241	Ddb1	89	86.837	ENSPMAG00000008479	ddb1	100	86.837	Petromyzon_marinus
ENSPEMG00000012241	Ddb1	100	99.123	ENSPCIG00000002643	DDB1	100	99.123	Phascolarctos_cinereus
ENSPEMG00000012241	Ddb1	100	90.885	ENSPFOG00000002768	ddb1	100	90.885	Poecilia_formosa
ENSPEMG00000012241	Ddb1	100	90.702	ENSPLAG00000017227	ddb1	100	90.702	Poecilia_latipinna
ENSPEMG00000012241	Ddb1	100	90.702	ENSPMEG00000011398	ddb1	100	90.702	Poecilia_mexicana
ENSPEMG00000012241	Ddb1	94	91.349	ENSPREG00000004440	ddb1	98	91.349	Poecilia_reticulata
ENSPEMG00000012241	Ddb1	100	94.852	ENSPPYG00000003193	DDB1	100	94.852	Pongo_abelii
ENSPEMG00000012241	Ddb1	85	99.552	ENSPCAG00000011040	DDB1	85	99.552	Procavia_capensis
ENSPEMG00000012241	Ddb1	100	98.249	ENSPCOG00000015176	DDB1	100	98.249	Propithecus_coquereli
ENSPEMG00000012241	Ddb1	100	99.737	ENSPVAG00000003847	DDB1	100	99.737	Pteropus_vampyrus
ENSPEMG00000012241	Ddb1	94	91.333	ENSPNAG00000006635	ddb1	97	91.333	Pygocentrus_nattereri
ENSPEMG00000012241	Ddb1	100	99.912	ENSRNOG00000020715	Ddb1	100	99.912	Rattus_norvegicus
ENSPEMG00000012241	Ddb1	100	99.825	ENSRBIG00000033611	DDB1	100	99.825	Rhinopithecus_bieti
ENSPEMG00000012241	Ddb1	100	99.825	ENSRROG00000041407	DDB1	100	99.825	Rhinopithecus_roxellana
ENSPEMG00000012241	Ddb1	100	99.737	ENSSBOG00000019775	DDB1	100	99.737	Saimiri_boliviensis_boliviensis
ENSPEMG00000012241	Ddb1	94	97.009	ENSSHAG00000011600	DDB1	100	97.009	Sarcophilus_harrisii
ENSPEMG00000012241	Ddb1	94	91.450	ENSSFOG00015011151	ddb1	97	91.450	Scleropages_formosus
ENSPEMG00000012241	Ddb1	100	91.053	ENSSMAG00000009495	ddb1	100	91.053	Scophthalmus_maximus
ENSPEMG00000012241	Ddb1	100	91.404	ENSSDUG00000004642	ddb1	100	91.404	Seriola_dumerili
ENSPEMG00000012241	Ddb1	100	91.404	ENSSLDG00000015804	ddb1	100	91.404	Seriola_lalandi_dorsalis
ENSPEMG00000012241	Ddb1	70	100.000	ENSSARG00000003290	-	72	100.000	Sorex_araneus
ENSPEMG00000012241	Ddb1	100	97.895	ENSSPUG00000019338	DDB1	100	97.895	Sphenodon_punctatus
ENSPEMG00000012241	Ddb1	94	91.628	ENSSPAG00000009888	ddb1	99	91.628	Stegastes_partitus
ENSPEMG00000012241	Ddb1	100	98.860	ENSSSCG00000013094	DDB1	100	98.860	Sus_scrofa
ENSPEMG00000012241	Ddb1	100	97.105	ENSTGUG00000006414	DDB1	100	97.105	Taeniopygia_guttata
ENSPEMG00000012241	Ddb1	94	90.308	ENSTRUG00000016682	ddb1	98	90.308	Takifugu_rubripes
ENSPEMG00000012241	Ddb1	88	85.030	ENSTNIG00000009565	ddb1	99	85.030	Tetraodon_nigroviridis
ENSPEMG00000012241	Ddb1	92	94.778	ENSTTRG00000011055	DDB1	94	94.778	Tursiops_truncatus
ENSPEMG00000012241	Ddb1	94	99.628	ENSUAMG00000017793	DDB1	93	99.628	Ursus_americanus
ENSPEMG00000012241	Ddb1	94	99.628	ENSUMAG00000011788	DDB1	98	99.628	Ursus_maritimus
ENSPEMG00000012241	Ddb1	90	100.000	ENSVPAG00000007963	DDB1	92	100.000	Vicugna_pacos
ENSPEMG00000012241	Ddb1	100	99.825	ENSVVUG00000004987	DDB1	100	99.825	Vulpes_vulpes
ENSPEMG00000012241	Ddb1	100	93.269	ENSXETG00000008820	ddb1	100	93.269	Xenopus_tropicalis
ENSPEMG00000012241	Ddb1	86	91.327	ENSXCOG00000013956	ddb1	99	91.327	Xiphophorus_couchianus
ENSPEMG00000012241	Ddb1	94	91.240	ENSXMAG00000000022	ddb1	99	91.240	Xiphophorus_maculatus