EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPEMG00000012279 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Peromyscus_maniculatus_bairdii
Status: putative
Strand: Minus strand
Length: 1885 bases
Position: chrKI615546.1:1227682-1229566
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPEMP00000011725	NOG1	PF06858.14	4.5e-10	1	1
ENSPEMP00000011725	MMR_HSR1	PF01926.23	2.3e-07	1	1
ENSPEMP00000011725	NOGCT	PF08155.11	4.6e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPEMT00000015915	-	1686	-	ENSPEMP00000011725	561 (aa)	-	-

Gene Model

Click here to download ENSPEMG00000012279's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPEMG00000012279's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPEMG00000012279	-	100	72.397	ENSPEMG00000015091	-	100	72.397

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPEMG00000012279	-	100	69.716	ENSG00000107937	GTPBP4	100	88.571	Homo_sapiens
ENSPEMG00000012279	-	100	61.417	ENSAPOG00000020433	gtpbp4	100	59.213	Acanthochromis_polyacanthus
ENSPEMG00000012279	-	100	69.291	ENSAMEG00000001845	GTPBP4	100	69.291	Ailuropoda_melanoleuca
ENSPEMG00000012279	-	100	57.165	ENSACIG00000018629	gtpbp4	100	57.571	Amphilophus_citrinellus
ENSPEMG00000012279	-	100	61.575	ENSAOCG00000000427	gtpbp4	93	61.830	Amphiprion_ocellaris
ENSPEMG00000012279	-	100	61.575	ENSAPEG00000002544	gtpbp4	100	61.830	Amphiprion_percula
ENSPEMG00000012279	-	100	61.732	ENSATEG00000012635	gtpbp4	95	61.987	Anabas_testudineus
ENSPEMG00000012279	-	50	53.799	ENSAPLG00000013790	-	100	53.799	Anas_platyrhynchos
ENSPEMG00000012279	-	100	62.461	ENSACAG00000002943	GTPBP4	100	62.461	Anolis_carolinensis
ENSPEMG00000012279	-	83	75.401	ENSANAG00000029209	-	100	75.401	Aotus_nancymaae
ENSPEMG00000012279	-	99	64.154	ENSANAG00000022188	-	98	63.844	Aotus_nancymaae
ENSPEMG00000012279	-	74	69.643	ENSACLG00000026330	gtpbp4	92	79.333	Astatotilapia_calliptera
ENSPEMG00000012279	-	100	60.883	ENSAMXG00000019771	gtpbp4	100	61.295	Astyanax_mexicanus
ENSPEMG00000012279	-	100	68.927	ENSBTAG00000014917	GTPBP4	100	68.927	Bos_taurus
ENSPEMG00000012279	-	99	43.279	WBGene00020297	nog-1	99	44.018	Caenorhabditis_elegans
ENSPEMG00000012279	-	100	69.497	ENSCJAG00000022962	-	100	69.969	Callithrix_jacchus
ENSPEMG00000012279	-	100	70.283	ENSCJAG00000008494	-	100	70.755	Callithrix_jacchus
ENSPEMG00000012279	-	94	70.187	ENSCAFG00000005536	GTPBP4	100	70.187	Canis_familiaris
ENSPEMG00000012279	-	100	69.558	ENSCAFG00020004307	GTPBP4	100	69.558	Canis_lupus_dingo
ENSPEMG00000012279	-	100	69.381	ENSCHIG00000018346	GTPBP4	100	69.381	Capra_hircus
ENSPEMG00000012279	-	100	69.243	ENSTSYG00000004977	GTPBP4	100	69.243	Carlito_syrichta
ENSPEMG00000012279	-	99	62.114	ENSCAPG00000002134	GTPBP4	96	62.114	Cavia_aperea
ENSPEMG00000012279	-	100	70.032	ENSCPOG00000013736	GTPBP4	100	70.032	Cavia_porcellus
ENSPEMG00000012279	-	99	69.668	ENSCCAG00000021627	-	92	70.300	Cebus_capucinus
ENSPEMG00000012279	-	100	59.797	ENSCCAG00000030115	-	100	59.797	Cebus_capucinus
ENSPEMG00000012279	-	100	70.505	ENSCATG00000004303	GTPBP4	100	70.505	Cercocebus_atys
ENSPEMG00000012279	-	100	69.874	ENSCLAG00000011323	GTPBP4	100	69.874	Chinchilla_lanigera
ENSPEMG00000012279	-	100	70.662	ENSCSAG00000014097	GTPBP4	100	70.662	Chlorocebus_sabaeus
ENSPEMG00000012279	-	97	76.471	ENSCHOG00000012602	GTPBP4	88	76.471	Choloepus_hoffmanni
ENSPEMG00000012279	-	100	64.038	ENSCPBG00000008398	GTPBP4	100	64.038	Chrysemys_picta_bellii
ENSPEMG00000012279	-	100	48.826	ENSCING00000001957	-	100	49.609	Ciona_intestinalis
ENSPEMG00000012279	-	100	48.769	ENSCSAVG00000009793	-	99	63.192	Ciona_savignyi
ENSPEMG00000012279	-	100	68.102	ENSCANG00000014168	GTPBP4	100	68.102	Colobus_angolensis_palliatus
ENSPEMG00000012279	-	100	72.555	ENSCGRG00001013765	Gtpbp4	100	72.555	Cricetulus_griseus_chok1gshd
ENSPEMG00000012279	-	100	72.555	ENSCGRG00000012171	Gtpbp4	100	72.555	Cricetulus_griseus_crigri
ENSPEMG00000012279	-	100	57.165	ENSCSEG00000007352	gtpbp4	100	57.413	Cynoglossus_semilaevis
ENSPEMG00000012279	-	100	60.472	ENSCVAG00000008993	gtpbp4	100	60.726	Cyprinodon_variegatus
ENSPEMG00000012279	-	100	60.918	ENSDARG00000018961	gtpbp4	100	61.331	Danio_rerio
ENSPEMG00000012279	-	66	63.765	ENSDNOG00000006746	GTPBP4	100	63.765	Dasypus_novemcinctus
ENSPEMG00000012279	-	81	81.905	ENSDORG00000010884	Gtpbp4	97	81.905	Dipodomys_ordii
ENSPEMG00000012279	-	100	46.012	FBgn0028473	Non1	100	46.933	Drosophila_melanogaster
ENSPEMG00000012279	-	75	73.469	ENSETEG00000016840	-	69	73.469	Echinops_telfairi
ENSPEMG00000012279	-	99	49.829	ENSEBUG00000010311	gtpbp4	96	49.829	Eptatretus_burgeri
ENSPEMG00000012279	-	100	69.936	ENSEASG00005019082	GTPBP4	100	69.874	Equus_asinus_asinus
ENSPEMG00000012279	-	100	69.874	ENSECAG00000001700	GTPBP4	93	81.818	Equus_caballus
ENSPEMG00000012279	-	97	77.429	ENSEEUG00000009889	GTPBP4	88	77.429	Erinaceus_europaeus
ENSPEMG00000012279	-	100	61.164	ENSELUG00000008578	gtpbp4	100	57.076	Esox_lucius
ENSPEMG00000012279	-	100	69.716	ENSFCAG00000026213	GTPBP4	100	69.716	Felis_catus
ENSPEMG00000012279	-	99	64.070	ENSFALG00000006971	GTPBP4	87	64.082	Ficedula_albicollis
ENSPEMG00000012279	-	100	70.662	ENSFDAG00000000998	GTPBP4	100	70.662	Fukomys_damarensis
ENSPEMG00000012279	-	100	61.732	ENSFHEG00000012922	gtpbp4	100	61.987	Fundulus_heteroclitus
ENSPEMG00000012279	-	100	59.843	ENSGMOG00000016090	gtpbp4	100	59.937	Gadus_morhua
ENSPEMG00000012279	-	100	63.924	ENSGALG00000006703	GTPBP4	100	63.924	Gallus_gallus
ENSPEMG00000012279	-	100	61.260	ENSGAFG00000002075	gtpbp4	100	61.514	Gambusia_affinis
ENSPEMG00000012279	-	100	60.630	ENSGACG00000017481	gtpbp4	100	60.883	Gasterosteus_aculeatus
ENSPEMG00000012279	-	94	65.758	ENSGAGG00000018689	GTPBP4	100	65.758	Gopherus_agassizii
ENSPEMG00000012279	-	100	69.558	ENSGGOG00000013372	GTPBP4	100	70.505	Gorilla_gorilla
ENSPEMG00000012279	-	100	61.732	ENSHBUG00000000192	gtpbp4	100	61.987	Haplochromis_burtoni
ENSPEMG00000012279	-	100	70.505	ENSHGLG00000013071	GTPBP4	100	70.505	Heterocephalus_glaber_female
ENSPEMG00000012279	-	100	64.567	ENSHGLG00100002964	-	100	64.567	Heterocephalus_glaber_male
ENSPEMG00000012279	-	100	70.505	ENSHGLG00100017850	GTPBP4	100	70.505	Heterocephalus_glaber_male
ENSPEMG00000012279	-	100	61.102	ENSHCOG00000011543	gtpbp4	100	61.102	Hippocampus_comes
ENSPEMG00000012279	-	100	60.410	ENSIPUG00000014417	GTPBP4	100	60.410	Ictalurus_punctatus
ENSPEMG00000012279	-	100	67.000	ENSSTOG00000023023	-	100	67.000	Ictidomys_tridecemlineatus
ENSPEMG00000012279	-	100	71.136	ENSSTOG00000010042	-	100	71.136	Ictidomys_tridecemlineatus
ENSPEMG00000012279	-	100	68.927	ENSJJAG00000010021	Gtpbp4	100	68.927	Jaculus_jaculus
ENSPEMG00000012279	-	100	59.213	ENSKMAG00000021705	gtpbp4	100	59.621	Kryptolebias_marmoratus
ENSPEMG00000012279	-	100	56.132	ENSLBEG00000021419	gtpbp4	100	60.374	Labrus_bergylta
ENSPEMG00000012279	-	100	61.514	ENSLACG00000001449	GTPBP4	100	61.514	Latimeria_chalumnae
ENSPEMG00000012279	-	100	58.129	ENSLOCG00000012279	gtpbp4	100	60.308	Lepisosteus_oculatus
ENSPEMG00000012279	-	100	70.032	ENSLAFG00000018578	GTPBP4	100	70.032	Loxodonta_africana
ENSPEMG00000012279	-	100	70.505	ENSMFAG00000046251	GTPBP4	100	70.505	Macaca_fascicularis
ENSPEMG00000012279	-	100	68.463	ENSMMUG00000010813	GTPBP4	100	68.463	Macaca_mulatta
ENSPEMG00000012279	-	100	70.662	ENSMNEG00000044366	GTPBP4	100	70.662	Macaca_nemestrina
ENSPEMG00000012279	-	100	70.347	ENSMLEG00000039605	GTPBP4	100	70.347	Mandrillus_leucophaeus
ENSPEMG00000012279	-	100	61.732	ENSMAMG00000013763	gtpbp4	92	61.987	Mastacembelus_armatus
ENSPEMG00000012279	-	100	61.890	ENSMZEG00005006621	gtpbp4	100	62.145	Maylandia_zebra
ENSPEMG00000012279	-	100	72.871	ENSMAUG00000000571	Gtpbp4	100	72.871	Mesocricetus_auratus
ENSPEMG00000012279	-	100	70.347	ENSMICG00000013332	GTPBP4	100	70.347	Microcebus_murinus
ENSPEMG00000012279	-	100	72.555	ENSMOCG00000002209	Gtpbp4	100	72.555	Microtus_ochrogaster
ENSPEMG00000012279	-	100	57.953	ENSMMOG00000011257	gtpbp4	100	58.202	Mola_mola
ENSPEMG00000012279	-	100	67.035	ENSMODG00000005978	GTPBP4	100	67.035	Monodelphis_domestica
ENSPEMG00000012279	-	100	60.410	ENSMALG00000012488	gtpbp4	100	61.041	Monopterus_albus
ENSPEMG00000012279	-	99	71.044	MGP_CAROLIEiJ_G0018215	Gtpbp4	100	71.196	Mus_caroli
ENSPEMG00000012279	-	100	72.240	ENSMUSG00000021149	Gtpbp4	93	82.353	Mus_musculus
ENSPEMG00000012279	-	100	72.082	MGP_PahariEiJ_G0019265	Gtpbp4	100	72.082	Mus_pahari
ENSPEMG00000012279	-	99	72.152	MGP_SPRETEiJ_G0019073	Gtpbp4	100	72.152	Mus_spretus
ENSPEMG00000012279	-	94	69.898	ENSMPUG00000016221	GTPBP4	100	69.898	Mustela_putorius_furo
ENSPEMG00000012279	-	100	69.401	ENSMLUG00000028192	GTPBP4	100	69.401	Myotis_lucifugus
ENSPEMG00000012279	-	100	70.032	ENSNGAG00000015364	Gtpbp4	100	70.032	Nannospalax_galili
ENSPEMG00000012279	-	88	80.000	ENSNBRG00000019965	gtpbp4	86	80.000	Neolamprologus_brichardi
ENSPEMG00000012279	-	100	69.558	ENSNLEG00000013495	GTPBP4	100	70.505	Nomascus_leucogenys
ENSPEMG00000012279	-	55	69.697	ENSMEUG00000016215	-	52	69.697	Notamacropus_eugenii
ENSPEMG00000012279	-	98	80.337	ENSOPRG00000008671	GTPBP4	88	80.337	Ochotona_princeps
ENSPEMG00000012279	-	100	70.347	ENSODEG00000019152	-	100	70.347	Octodon_degus
ENSPEMG00000012279	-	100	71.136	ENSODEG00000000962	-	100	71.136	Octodon_degus
ENSPEMG00000012279	-	100	61.890	ENSONIG00000017707	gtpbp4	100	62.145	Oreochromis_niloticus
ENSPEMG00000012279	-	99	67.323	ENSOANG00000006095	-	96	67.323	Ornithorhynchus_anatinus
ENSPEMG00000012279	-	100	69.243	ENSOCUG00000016120	-	100	69.243	Oryctolagus_cuniculus
ENSPEMG00000012279	-	59	74.302	ENSOCUG00000014716	-	95	74.302	Oryctolagus_cuniculus
ENSPEMG00000012279	-	100	60.945	ENSORLG00000006151	gtpbp4	100	61.041	Oryzias_latipes
ENSPEMG00000012279	-	100	60.945	ENSORLG00020020899	gtpbp4	100	61.041	Oryzias_latipes_hni
ENSPEMG00000012279	-	100	61.041	ENSORLG00015020562	gtpbp4	100	61.041	Oryzias_latipes_hsok
ENSPEMG00000012279	-	100	60.945	ENSOMEG00000019684	gtpbp4	100	61.199	Oryzias_melastigma
ENSPEMG00000012279	-	100	70.662	ENSOGAG00000011941	GTPBP4	100	70.978	Otolemur_garnettii
ENSPEMG00000012279	-	100	67.555	ENSOARG00000015047	GTPBP4	100	68.446	Ovis_aries
ENSPEMG00000012279	-	100	69.558	ENSPPAG00000042066	GTPBP4	100	70.505	Pan_paniscus
ENSPEMG00000012279	-	100	70.032	ENSPPRG00000009895	GTPBP4	100	70.032	Panthera_pardus
ENSPEMG00000012279	-	100	69.874	ENSPTIG00000008569	GTPBP4	100	69.874	Panthera_tigris_altaica
ENSPEMG00000012279	-	75	76.380	ENSPTRG00000002236	GTPBP4	92	73.849	Pan_troglodytes
ENSPEMG00000012279	-	100	70.347	ENSPANG00000023543	GTPBP4	100	70.347	Papio_anubis
ENSPEMG00000012279	-	100	60.743	ENSPKIG00000012301	gtpbp4	100	62.255	Paramormyrops_kingsleyae
ENSPEMG00000012279	-	62	71.018	ENSPSIG00000005442	GTPBP4	100	71.018	Pelodiscus_sinensis
ENSPEMG00000012279	-	100	59.554	ENSPMGG00000001462	gtpbp4	100	59.968	Periophthalmus_magnuspinnatus
ENSPEMG00000012279	-	100	56.804	ENSPMAG00000000905	gtpbp4	100	56.804	Petromyzon_marinus
ENSPEMG00000012279	-	100	67.350	ENSPCIG00000026082	GTPBP4	100	67.350	Phascolarctos_cinereus
ENSPEMG00000012279	-	100	61.260	ENSPFOG00000000026	gtpbp4	100	61.514	Poecilia_formosa
ENSPEMG00000012279	-	91	60.580	ENSPLAG00000002898	gtpbp4	97	60.855	Poecilia_latipinna
ENSPEMG00000012279	-	100	61.102	ENSPMEG00000016422	gtpbp4	100	61.356	Poecilia_mexicana
ENSPEMG00000012279	-	100	57.795	ENSPREG00000019870	gtpbp4	100	58.044	Poecilia_reticulata
ENSPEMG00000012279	-	100	69.716	ENSPPYG00000002037	GTPBP4	100	70.662	Pongo_abelii
ENSPEMG00000012279	-	64	77.181	ENSPCAG00000006152	-	57	77.181	Procavia_capensis
ENSPEMG00000012279	-	100	68.710	ENSPCOG00000014382	-	100	68.710	Propithecus_coquereli
ENSPEMG00000012279	-	97	69.360	ENSPCOG00000014602	-	100	69.360	Propithecus_coquereli
ENSPEMG00000012279	-	93	80.769	ENSPVAG00000005882	GTPBP4	84	80.769	Pteropus_vampyrus
ENSPEMG00000012279	-	100	53.228	ENSPNYG00000024251	gtpbp4	100	53.470	Pundamilia_nyererei
ENSPEMG00000012279	-	100	60.945	ENSPNAG00000019977	gtpbp4	100	61.356	Pygocentrus_nattereri
ENSPEMG00000012279	-	100	71.069	ENSRNOG00000016217	Gtpbp4	100	71.698	Rattus_norvegicus
ENSPEMG00000012279	-	100	70.505	ENSRBIG00000028875	GTPBP4	100	70.505	Rhinopithecus_bieti
ENSPEMG00000012279	-	100	70.505	ENSRROG00000030798	GTPBP4	100	70.505	Rhinopithecus_roxellana
ENSPEMG00000012279	-	73	43.619	YPL093W	-	68	43.836	Saccharomyces_cerevisiae
ENSPEMG00000012279	-	100	70.597	ENSSBOG00000028421	GTPBP4	100	70.597	Saimiri_boliviensis_boliviensis
ENSPEMG00000012279	-	99	66.879	ENSSHAG00000014713	GTPBP4	94	66.879	Sarcophilus_harrisii
ENSPEMG00000012279	-	100	60.726	ENSSFOG00015003167	gtpbp4	100	61.356	Scleropages_formosus
ENSPEMG00000012279	-	100	60.945	ENSSMAG00000005863	gtpbp4	100	61.199	Scophthalmus_maximus
ENSPEMG00000012279	-	100	60.945	ENSSDUG00000006534	gtpbp4	100	61.199	Seriola_dumerili
ENSPEMG00000012279	-	100	60.945	ENSSLDG00000020688	gtpbp4	100	61.199	Seriola_lalandi_dorsalis
ENSPEMG00000012279	-	59	82.474	ENSSARG00000003409	-	78	82.474	Sorex_araneus
ENSPEMG00000012279	-	100	63.091	ENSSPUG00000002153	GTPBP4	100	63.091	Sphenodon_punctatus
ENSPEMG00000012279	-	61	51.302	ENSSPAG00000014583	gtpbp4	100	51.697	Stegastes_partitus
ENSPEMG00000012279	-	100	67.823	ENSSSCG00000028602	GTPBP4	100	67.823	Sus_scrofa
ENSPEMG00000012279	-	99	64.426	ENSTGUG00000000820	GTPBP4	97	64.590	Taeniopygia_guttata
ENSPEMG00000012279	-	100	60.945	ENSTRUG00000003900	gtpbp4	100	61.199	Takifugu_rubripes
ENSPEMG00000012279	-	100	61.732	ENSTNIG00000007992	gtpbp4	100	61.987	Tetraodon_nigroviridis
ENSPEMG00000012279	-	89	70.489	ENSTBEG00000003613	GTPBP4	88	70.489	Tupaia_belangeri
ENSPEMG00000012279	-	100	69.307	ENSTTRG00000011163	GTPBP4	100	69.307	Tursiops_truncatus
ENSPEMG00000012279	-	100	69.874	ENSUAMG00000013191	GTPBP4	100	69.874	Ursus_americanus
ENSPEMG00000012279	-	94	70.358	ENSUMAG00000016138	GTPBP4	100	70.358	Ursus_maritimus
ENSPEMG00000012279	-	100	69.558	ENSVVUG00000008608	GTPBP4	98	69.558	Vulpes_vulpes
ENSPEMG00000012279	-	100	55.024	ENSXETG00000018097	gtpbp4	100	55.502	Xenopus_tropicalis
ENSPEMG00000012279	-	99	59.054	ENSXCOG00000019953	gtpbp4	94	59.314	Xiphophorus_couchianus
ENSPEMG00000012279	-	100	61.129	ENSXMAG00000006719	gtpbp4	100	61.381	Xiphophorus_maculatus