EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: ENSPEMG00000012539 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Peromyscus_maniculatus_bairdii
Status: putative
Strand: Minus strand
Length: 3360 bases
Position: chrKI616320.1:174437-177796
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPEMP00000012105	GUCT	PF08152.12	4.8e-12	1	1
ENSPEMP00000012105	ResIII	PF04851.15	2.2e-09	1	1
ENSPEMP00000012105	DEAD	PF00270.29	5.1e-34	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPEMT00000016301	-	1833	-	ENSPEMP00000012105	610 (aa)	-	-

Gene Model

Click here to download ENSPEMG00000012539's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPEMG00000012539's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPEMG00000012539	-	57	30.189	ENSPEMG00000015978	-	55	30.458
ENSPEMG00000012539	-	52	31.722	ENSPEMG00000009746	Ddx47	70	31.722
ENSPEMG00000012539	-	56	31.445	ENSPEMG00000023986	Ddx43	62	31.445
ENSPEMG00000012539	-	88	62.456	ENSPEMG00000018513	Ddx21	73	62.697
ENSPEMG00000012539	-	52	31.532	ENSPEMG00000016502	Ddx5	53	31.832
ENSPEMG00000012539	-	99	86.458	ENSPEMG00000020899	-	91	86.458
ENSPEMG00000012539	-	64	30.806	ENSPEMG00000023215	Ddx27	52	30.622
ENSPEMG00000012539	-	60	32.648	ENSPEMG00000010438	-	57	32.648
ENSPEMG00000012539	-	57	31.967	ENSPEMG00000021115	Ddx17	55	31.967
ENSPEMG00000012539	-	56	30.194	ENSPEMG00000000049	Ddx41	57	30.194