EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPEMG00000012828 (Gene tree)
Gene ID: 102926397
Gene Symbol: -
Alias: -
Full Name: signal recognition particle 72
Gene Type: protein_coding
Species: Peromyscus_maniculatus_bairdii
Status: putative
Strand: Minus strand
Length: 28219 bases
Position: chrKI616615.1:215325-243543
Accession: 102926397
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPEMP00000012521	SRP72	PF08492.12	3.7e-22	1	1
ENSPEMP00000012516	SRP72	PF08492.12	4.2e-22	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPEMT00000016723	-	3123	XM_006997349	ENSPEMP00000012516	674 (aa)	XP_006997411	UPI00042AC590
ENSPEMT00000016729	-	1842	-	ENSPEMP00000012521	613 (aa)	-	-

Gene Model

Click here to download ENSPEMG00000012828's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPEMG00000012828's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPEMG00000012828	-	100	96.439	ENSG00000174780	SRP72	100	96.439	Homo_sapiens
ENSPEMG00000012828	-	99	76.151	ENSAPOG00000019438	srp72	98	76.421	Acanthochromis_polyacanthus
ENSPEMG00000012828	-	100	96.736	ENSAMEG00000008469	SRP72	99	96.736	Ailuropoda_melanoleuca
ENSPEMG00000012828	-	99	76.942	ENSACIG00000000488	srp72	99	75.982	Amphilophus_citrinellus
ENSPEMG00000012828	-	99	76.012	ENSAOCG00000011256	srp72	99	76.328	Amphiprion_ocellaris
ENSPEMG00000012828	-	99	76.162	ENSAPEG00000001512	srp72	99	76.480	Amphiprion_percula
ENSPEMG00000012828	-	99	72.204	ENSATEG00000006781	srp72	98	77.558	Anabas_testudineus
ENSPEMG00000012828	-	98	83.939	ENSAPLG00000008751	SRP72	98	83.636	Anas_platyrhynchos
ENSPEMG00000012828	-	98	85.370	ENSACAG00000002381	SRP72	97	85.303	Anolis_carolinensis
ENSPEMG00000012828	-	97	95.477	ENSANAG00000020836	-	98	95.993	Aotus_nancymaae
ENSPEMG00000012828	-	99	76.497	ENSACLG00000014617	srp72	99	76.818	Astatotilapia_calliptera
ENSPEMG00000012828	-	99	76.762	ENSAMXG00000004011	srp72	99	77.086	Astyanax_mexicanus
ENSPEMG00000012828	-	100	96.588	ENSBTAG00000010593	SRP72	100	96.588	Bos_taurus
ENSPEMG00000012828	-	98	95.137	ENSCJAG00000017998	SRP72	98	95.606	Callithrix_jacchus
ENSPEMG00000012828	-	100	96.884	ENSCAFG00000002244	SRP72	100	96.884	Canis_familiaris
ENSPEMG00000012828	-	100	96.900	ENSCAFG00020027338	SRP72	100	96.900	Canis_lupus_dingo
ENSPEMG00000012828	-	98	94.394	ENSCHIG00000021465	SRP72	98	94.864	Capra_hircus
ENSPEMG00000012828	-	100	97.078	ENSTSYG00000010571	-	100	97.078	Carlito_syrichta
ENSPEMG00000012828	-	78	89.286	ENSCAPG00000016668	SRP72	93	95.876	Cavia_aperea
ENSPEMG00000012828	-	100	95.994	ENSCPOG00000000218	SRP72	100	95.994	Cavia_porcellus
ENSPEMG00000012828	-	98	93.465	ENSCCAG00000030830	-	98	94.242	Cebus_capucinus
ENSPEMG00000012828	-	95	95.164	ENSCCAG00000030683	-	95	95.164	Cebus_capucinus
ENSPEMG00000012828	-	100	96.291	ENSCATG00000008072	SRP72	100	96.291	Cercocebus_atys
ENSPEMG00000012828	-	97	76.560	ENSCATG00000045359	-	94	76.708	Cercocebus_atys
ENSPEMG00000012828	-	100	96.291	ENSCLAG00000003571	SRP72	100	96.291	Chinchilla_lanigera
ENSPEMG00000012828	-	100	90.504	ENSCSAG00000005079	SRP72	98	90.909	Chlorocebus_sabaeus
ENSPEMG00000012828	-	90	95.868	ENSCHOG00000013240	SRP72	90	95.868	Choloepus_hoffmanni
ENSPEMG00000012828	-	95	86.003	ENSCPBG00000015015	SRP72	98	86.212	Chrysemys_picta_bellii
ENSPEMG00000012828	-	94	42.553	ENSCING00000002417	-	98	41.813	Ciona_intestinalis
ENSPEMG00000012828	-	92	41.705	ENSCSAVG00000011288	-	98	41.374	Ciona_savignyi
ENSPEMG00000012828	-	100	96.291	ENSCANG00000041709	SRP72	100	96.291	Colobus_angolensis_palliatus
ENSPEMG00000012828	-	89	79.253	ENSCANG00000037920	-	96	79.661	Colobus_angolensis_palliatus
ENSPEMG00000012828	-	100	98.532	ENSCGRG00001013548	Srp72	100	98.532	Cricetulus_griseus_chok1gshd
ENSPEMG00000012828	-	94	99.054	ENSCGRG00000003013	Srp72	99	99.127	Cricetulus_griseus_crigri
ENSPEMG00000012828	-	99	76.981	ENSCSEG00000003616	srp72	99	76.667	Cynoglossus_semilaevis
ENSPEMG00000012828	-	89	78.529	ENSCVAG00000001520	srp72	99	77.371	Cyprinodon_variegatus
ENSPEMG00000012828	-	84	76.667	ENSDARG00000014139	srp72	99	75.926	Danio_rerio
ENSPEMG00000012828	-	99	91.220	ENSDNOG00000039012	SRP72	82	91.843	Dasypus_novemcinctus
ENSPEMG00000012828	-	98	95.764	ENSDORG00000000171	Srp72	98	95.758	Dipodomys_ordii
ENSPEMG00000012828	-	91	41.346	FBgn0038810	Srp72	94	41.961	Drosophila_melanogaster
ENSPEMG00000012828	-	96	95.342	ENSETEG00000005191	SRP72	98	95.303	Echinops_telfairi
ENSPEMG00000012828	-	73	61.789	ENSEBUG00000003696	srp72	96	62.041	Eptatretus_burgeri
ENSPEMG00000012828	-	100	96.439	ENSEASG00005017747	SRP72	100	96.439	Equus_asinus_asinus
ENSPEMG00000012828	-	100	96.439	ENSECAG00000006920	SRP72	100	96.439	Equus_caballus
ENSPEMG00000012828	-	100	75.110	ENSELUG00000022415	srp72	100	75.135	Esox_lucius
ENSPEMG00000012828	-	100	96.737	ENSFCAG00000027600	SRP72	100	96.737	Felis_catus
ENSPEMG00000012828	-	95	86.003	ENSFALG00000006713	SRP72	98	85.606	Ficedula_albicollis
ENSPEMG00000012828	-	98	95.593	ENSFDAG00000002014	-	98	96.061	Fukomys_damarensis
ENSPEMG00000012828	-	97	65.494	ENSFDAG00000009793	-	93	64.164	Fukomys_damarensis
ENSPEMG00000012828	-	99	75.187	ENSFHEG00000017652	srp72	91	76.248	Fundulus_heteroclitus
ENSPEMG00000012828	-	97	72.713	ENSGMOG00000005986	srp72	98	73.222	Gadus_morhua
ENSPEMG00000012828	-	95	86.293	ENSGALG00000011403	SRP72	98	86.191	Gallus_gallus
ENSPEMG00000012828	-	99	76.084	ENSGAFG00000017762	srp72	99	76.551	Gambusia_affinis
ENSPEMG00000012828	-	99	74.589	ENSGACG00000016749	srp72	98	75.492	Gasterosteus_aculeatus
ENSPEMG00000012828	-	88	86.050	ENSGAGG00000024611	SRP72	99	85.882	Gopherus_agassizii
ENSPEMG00000012828	-	100	96.142	ENSGGOG00000013234	-	100	96.142	Gorilla_gorilla
ENSPEMG00000012828	-	99	76.647	ENSHBUG00000020723	srp72	99	76.818	Haplochromis_burtoni
ENSPEMG00000012828	-	97	73.059	ENSHGLG00000018597	-	98	74.091	Heterocephalus_glaber_female
ENSPEMG00000012828	-	98	79.035	ENSHGLG00000010633	-	97	87.634	Heterocephalus_glaber_female
ENSPEMG00000012828	-	98	95.745	ENSHGLG00000009791	SRP72	98	96.364	Heterocephalus_glaber_female
ENSPEMG00000012828	-	86	91.379	ENSHGLG00000003950	-	98	92.661	Heterocephalus_glaber_female
ENSPEMG00000012828	-	55	76.176	ENSHGLG00000003496	-	97	76.176	Heterocephalus_glaber_female
ENSPEMG00000012828	-	98	89.970	ENSHGLG00000005029	-	96	90.217	Heterocephalus_glaber_female
ENSPEMG00000012828	-	98	95.745	ENSHGLG00100009021	SRP72	98	96.364	Heterocephalus_glaber_male
ENSPEMG00000012828	-	86	90.948	ENSHGLG00100017133	-	98	92.202	Heterocephalus_glaber_male
ENSPEMG00000012828	-	100	77.958	ENSHGLG00100009346	-	95	77.342	Heterocephalus_glaber_male
ENSPEMG00000012828	-	98	89.970	ENSHGLG00100011236	-	96	90.217	Heterocephalus_glaber_male
ENSPEMG00000012828	-	99	79.293	ENSHCOG00000013760	srp72	99	76.783	Hippocampus_comes
ENSPEMG00000012828	-	100	75.964	ENSIPUG00000000210	srp72	99	76.631	Ictalurus_punctatus
ENSPEMG00000012828	-	100	96.737	ENSSTOG00000007305	SRP72	100	96.737	Ictidomys_tridecemlineatus
ENSPEMG00000012828	-	95	96.579	ENSJJAG00000018324	Srp72	98	96.212	Jaculus_jaculus
ENSPEMG00000012828	-	99	74.963	ENSKMAG00000003776	srp72	99	74.887	Kryptolebias_marmoratus
ENSPEMG00000012828	-	97	77.863	ENSLOCG00000002628	srp72	95	78.037	Lepisosteus_oculatus
ENSPEMG00000012828	-	100	95.697	ENSLAFG00000018307	SRP72	100	95.697	Loxodonta_africana
ENSPEMG00000012828	-	100	96.291	ENSMFAG00000031065	SRP72	100	96.291	Macaca_fascicularis
ENSPEMG00000012828	-	97	78.067	ENSMFAG00000037164	-	96	78.037	Macaca_fascicularis
ENSPEMG00000012828	-	93	70.906	ENSMMUG00000021262	-	95	70.607	Macaca_mulatta
ENSPEMG00000012828	-	100	96.248	ENSMMUG00000016368	SRP72	100	96.248	Macaca_mulatta
ENSPEMG00000012828	-	100	96.291	ENSMNEG00000038065	-	100	96.291	Macaca_nemestrina
ENSPEMG00000012828	-	95	94.852	ENSMLEG00000030140	-	95	94.852	Mandrillus_leucophaeus
ENSPEMG00000012828	-	99	76.198	ENSMAMG00000014989	srp72	87	76.364	Mastacembelus_armatus
ENSPEMG00000012828	-	99	76.647	ENSMZEG00005003325	srp72	99	76.818	Maylandia_zebra
ENSPEMG00000012828	-	94	82.205	ENSMGAG00000008567	SRP72	100	85.043	Meleagris_gallopavo
ENSPEMG00000012828	-	100	98.532	ENSMAUG00000001237	Srp72	100	98.532	Mesocricetus_auratus
ENSPEMG00000012828	-	95	94.696	ENSMICG00000008507	-	95	94.696	Microcebus_murinus
ENSPEMG00000012828	-	100	98.665	ENSMOCG00000020309	Srp72	100	98.665	Microtus_ochrogaster
ENSPEMG00000012828	-	100	74.222	ENSMMOG00000002627	srp72	99	75.152	Mola_mola
ENSPEMG00000012828	-	97	86.634	ENSMODG00000020697	SRP72	98	85.736	Monodelphis_domestica
ENSPEMG00000012828	-	99	75.898	ENSMALG00000003747	srp72	100	76.198	Monopterus_albus
ENSPEMG00000012828	-	100	97.626	MGP_CAROLIEiJ_G0027323	Srp72	100	97.626	Mus_caroli
ENSPEMG00000012828	-	100	97.626	ENSMUSG00000036323	Srp72	100	97.626	Mus_musculus
ENSPEMG00000012828	-	100	98.220	MGP_PahariEiJ_G0017103	Srp72	100	98.220	Mus_pahari
ENSPEMG00000012828	-	100	97.626	MGP_SPRETEiJ_G0028317	Srp72	100	97.626	Mus_spretus
ENSPEMG00000012828	-	100	96.291	ENSMPUG00000004828	SRP72	100	96.291	Mustela_putorius_furo
ENSPEMG00000012828	-	96	96.434	ENSMLUG00000007344	SRP72	98	96.369	Myotis_lucifugus
ENSPEMG00000012828	-	100	96.142	ENSNGAG00000012595	Srp72	98	96.818	Nannospalax_galili
ENSPEMG00000012828	-	99	73.353	ENSNBRG00000014492	srp72	99	73.485	Neolamprologus_brichardi
ENSPEMG00000012828	-	100	90.059	ENSNLEG00000008806	-	100	90.059	Nomascus_leucogenys
ENSPEMG00000012828	-	98	77.964	ENSMEUG00000005164	SRP72	88	91.818	Notamacropus_eugenii
ENSPEMG00000012828	-	95	94.548	ENSOPRG00000012521	SRP72	98	94.385	Ochotona_princeps
ENSPEMG00000012828	-	96	93.643	ENSODEG00000012214	SRP72	98	93.646	Octodon_degus
ENSPEMG00000012828	-	99	76.647	ENSONIG00000001446	srp72	98	76.818	Oreochromis_niloticus
ENSPEMG00000012828	-	98	70.934	ENSOANG00000008562	SRP72	95	70.462	Ornithorhynchus_anatinus
ENSPEMG00000012828	-	97	95.738	ENSOCUG00000012226	SRP72	98	96.061	Oryctolagus_cuniculus
ENSPEMG00000012828	-	99	74.813	ENSORLG00000020418	srp72	99	74.810	Oryzias_latipes
ENSPEMG00000012828	-	99	75.000	ENSORLG00020009138	srp72	97	73.596	Oryzias_latipes_hni
ENSPEMG00000012828	-	99	74.213	ENSORLG00015018251	srp72	99	74.203	Oryzias_latipes_hsok
ENSPEMG00000012828	-	99	73.763	ENSOMEG00000022008	srp72	98	74.507	Oryzias_melastigma
ENSPEMG00000012828	-	97	96.024	ENSOGAG00000003578	SRP72	98	96.364	Otolemur_garnettii
ENSPEMG00000012828	-	100	96.588	ENSOARG00000004329	SRP72	100	96.588	Ovis_aries
ENSPEMG00000012828	-	100	96.439	ENSPPAG00000042265	SRP72	100	96.439	Pan_paniscus
ENSPEMG00000012828	-	98	68.533	ENSPPAG00000011428	-	93	70.140	Pan_paniscus
ENSPEMG00000012828	-	80	75.933	ENSPPAG00000032490	-	91	75.000	Pan_paniscus
ENSPEMG00000012828	-	100	96.588	ENSPPRG00000015991	SRP72	100	96.588	Panthera_pardus
ENSPEMG00000012828	-	100	96.588	ENSPTIG00000018786	SRP72	100	96.588	Panthera_tigris_altaica
ENSPEMG00000012828	-	98	70.909	ENSPTRG00000048100	-	93	72.628	Pan_troglodytes
ENSPEMG00000012828	-	80	75.746	ENSPTRG00000043609	-	91	74.723	Pan_troglodytes
ENSPEMG00000012828	-	100	96.439	ENSPTRG00000048466	-	100	96.439	Pan_troglodytes
ENSPEMG00000012828	-	94	76.063	ENSPANG00000030230	-	97	76.715	Papio_anubis
ENSPEMG00000012828	-	100	96.291	ENSPANG00000005495	SRP72	100	96.291	Papio_anubis
ENSPEMG00000012828	-	93	85.783	ENSPSIG00000003003	SRP72	100	85.670	Pelodiscus_sinensis
ENSPEMG00000012828	-	96	89.628	ENSPCIG00000000732	SRP72	98	89.833	Phascolarctos_cinereus
ENSPEMG00000012828	-	99	76.084	ENSPFOG00000003480	srp72	99	76.702	Poecilia_formosa
ENSPEMG00000012828	-	99	76.233	ENSPLAG00000020122	srp72	99	76.702	Poecilia_latipinna
ENSPEMG00000012828	-	99	75.785	ENSPMEG00000019988	srp72	99	76.399	Poecilia_mexicana
ENSPEMG00000012828	-	99	75.934	ENSPREG00000006218	srp72	99	76.399	Poecilia_reticulata
ENSPEMG00000012828	-	100	96.439	ENSPPYG00000014752	-	78	96.439	Pongo_abelii
ENSPEMG00000012828	-	62	79.843	ENSPPYG00000009152	-	95	78.534	Pongo_abelii
ENSPEMG00000012828	-	98	94.681	ENSPVAG00000005590	SRP72	98	95.152	Pteropus_vampyrus
ENSPEMG00000012828	-	99	76.946	ENSPNYG00000001916	srp72	99	77.121	Pundamilia_nyererei
ENSPEMG00000012828	-	99	76.912	ENSPNAG00000022424	srp72	99	77.238	Pygocentrus_nattereri
ENSPEMG00000012828	-	100	95.994	ENSRNOG00000002100	LOC108348180	100	95.994	Rattus_norvegicus
ENSPEMG00000012828	-	98	74.849	ENSRBIG00000029328	-	96	75.311	Rhinopithecus_bieti
ENSPEMG00000012828	-	98	89.970	ENSRBIG00000042069	SRP72	98	90.758	Rhinopithecus_bieti
ENSPEMG00000012828	-	100	96.291	ENSRROG00000035704	SRP72	100	96.291	Rhinopithecus_roxellana
ENSPEMG00000012828	-	95	89.498	ENSSHAG00000000614	SRP72	95	89.498	Sarcophilus_harrisii
ENSPEMG00000012828	-	99	78.111	ENSSFOG00015002026	srp72	96	78.072	Scleropages_formosus
ENSPEMG00000012828	-	99	74.589	ENSSMAG00000007639	srp72	99	75.264	Scophthalmus_maximus
ENSPEMG00000012828	-	99	78.086	ENSSDUG00000007345	srp72	97	77.273	Seriola_dumerili
ENSPEMG00000012828	-	98	78.086	ENSSLDG00000021819	srp72	99	77.005	Seriola_lalandi_dorsalis
ENSPEMG00000012828	-	82	91.316	ENSSARG00000005804	SRP72	75	91.414	Sorex_araneus
ENSPEMG00000012828	-	95	85.358	ENSSPUG00000009740	SRP72	98	85.281	Sphenodon_punctatus
ENSPEMG00000012828	-	99	75.599	ENSSPAG00000011565	srp72	99	76.515	Stegastes_partitus
ENSPEMG00000012828	-	100	94.065	ENSSSCG00000008900	SRP72	100	94.065	Sus_scrofa
ENSPEMG00000012828	-	95	85.870	ENSTGUG00000004767	SRP72	98	85.477	Taeniopygia_guttata
ENSPEMG00000012828	-	99	75.262	ENSTRUG00000009831	srp72	99	75.417	Takifugu_rubripes
ENSPEMG00000012828	-	98	78.841	ENSTNIG00000013073	srp72	98	77.121	Tetraodon_nigroviridis
ENSPEMG00000012828	-	90	90.625	ENSTBEG00000007394	SRP72	89	83.178	Tupaia_belangeri
ENSPEMG00000012828	-	94	95.899	ENSTTRG00000010945	SRP72	100	95.899	Tursiops_truncatus
ENSPEMG00000012828	-	65	96.465	ENSUAMG00000001701	SRP72	100	96.316	Ursus_americanus
ENSPEMG00000012828	-	100	96.736	ENSUMAG00000008151	SRP72	100	96.736	Ursus_maritimus
ENSPEMG00000012828	-	97	94.801	ENSVPAG00000000458	SRP72	98	95.152	Vicugna_pacos
ENSPEMG00000012828	-	100	96.736	ENSVVUG00000006020	SRP72	100	96.736	Vulpes_vulpes
ENSPEMG00000012828	-	94	78.493	ENSXETG00000010205	srp72	100	78.493	Xenopus_tropicalis
ENSPEMG00000012828	-	99	75.785	ENSXMAG00000018000	srp72	98	76.097	Xiphophorus_maculatus