EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPEMG00000013234 (Gene tree)
Gene ID: -
Gene Symbol: Slirp
Alias: -
Full Name: SRA stem-loop interacting RNA binding protein
Gene Type: protein_coding
Species: Peromyscus_maniculatus_bairdii
Status: putative
Strand: Plus strand
Length: 6466 bases
Position: chrKI615772.1:2044108-2050573
Accession: 102924055
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPEMP00000013090	RRM_1	PF00076.22	1e-14	1	1
ENSPEMP00000013097	RRM_1	PF00076.22	1.3e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPEMT00000017324	-	342	XM_006990321	ENSPEMP00000013097	114 (aa)	XP_006990383	-
ENSPEMT00000017317	-	452	-	ENSPEMP00000013090	102 (aa)	-	-

Gene Model

Click here to download ENSPEMG00000013234's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPEMG00000013234's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPEMG00000013234	Slirp	84	30.769	ENSPEMG00000023987	Hnrnpab	60	30.769
ENSPEMG00000013234	Slirp	63	32.812	ENSPEMG00000021793	-	57	32.812
ENSPEMG00000013234	Slirp	64	32.308	ENSPEMG00000014384	Hnrnpa2b1	51	31.707

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPEMG00000013234	Slirp	80	67.033	ENSG00000119705	SLIRP	95	75.000	Homo_sapiens
ENSPEMG00000013234	Slirp	69	52.857	ENSAPOG00000001298	slirp	71	54.930	Acanthochromis_polyacanthus
ENSPEMG00000013234	Slirp	89	73.626	ENSAMEG00000003975	SLIRP	88	75.000	Ailuropoda_melanoleuca
ENSPEMG00000013234	Slirp	69	52.857	ENSACIG00000023083	slirp	71	54.167	Amphilophus_citrinellus
ENSPEMG00000013234	Slirp	77	46.591	ENSAOCG00000006342	slirp	89	46.591	Amphiprion_ocellaris
ENSPEMG00000013234	Slirp	77	46.591	ENSAPEG00000015917	slirp	89	46.591	Amphiprion_percula
ENSPEMG00000013234	Slirp	77	46.591	ENSAPEG00000015719	-	90	46.591	Amphiprion_percula
ENSPEMG00000013234	Slirp	76	44.828	ENSATEG00000013525	slirp	87	44.828	Anabas_testudineus
ENSPEMG00000013234	Slirp	77	46.591	ENSAMXG00000018693	slirp	88	46.591	Astyanax_mexicanus
ENSPEMG00000013234	Slirp	96	69.091	ENSCJAG00000016946	SLIRP	83	80.519	Callithrix_jacchus
ENSPEMG00000013234	Slirp	96	67.273	ENSCAFG00020015876	-	88	70.707	Canis_lupus_dingo
ENSPEMG00000013234	Slirp	96	70.909	ENSCCAG00000030130	SLIRP	88	72.727	Cebus_capucinus
ENSPEMG00000013234	Slirp	96	66.055	ENSCATG00000036327	SLIRP	83	72.727	Cercocebus_atys
ENSPEMG00000013234	Slirp	96	68.807	ENSCSAG00000011736	SLIRP	86	70.408	Chlorocebus_sabaeus
ENSPEMG00000013234	Slirp	69	51.429	ENSCPBG00000026327	SLIRP	71	51.429	Chrysemys_picta_bellii
ENSPEMG00000013234	Slirp	70	77.465	ENSCANG00000032892	SLIRP	80	71.795	Colobus_angolensis_palliatus
ENSPEMG00000013234	Slirp	96	77.273	ENSCGRG00001024068	Slirp	88	76.768	Cricetulus_griseus_chok1gshd
ENSPEMG00000013234	Slirp	96	77.273	ENSCGRG00000017440	Slirp	88	76.768	Cricetulus_griseus_crigri
ENSPEMG00000013234	Slirp	73	51.351	ENSCSEG00000015766	slirp	72	54.930	Cynoglossus_semilaevis
ENSPEMG00000013234	Slirp	68	59.420	ENSCVAG00000012504	slirp	69	58.571	Cyprinodon_variegatus
ENSPEMG00000013234	Slirp	70	54.930	ENSDARG00000097753	slirp	69	57.746	Danio_rerio
ENSPEMG00000013234	Slirp	79	67.778	ENSDNOG00000007721	SLIRP	80	67.778	Dasypus_novemcinctus
ENSPEMG00000013234	Slirp	98	67.857	ENSDORG00000012379	Slirp	90	70.297	Dipodomys_ordii
ENSPEMG00000013234	Slirp	87	64.646	ENSETEG00000010345	SLIRP	98	63.636	Echinops_telfairi
ENSPEMG00000013234	Slirp	98	72.321	ENSEASG00005020193	SLIRP	90	73.267	Equus_asinus_asinus
ENSPEMG00000013234	Slirp	90	57.282	ENSEEUG00000007257	SLIRP	90	60.215	Erinaceus_europaeus
ENSPEMG00000013234	Slirp	69	50.000	ENSELUG00000016800	slirp	70	52.113	Esox_lucius
ENSPEMG00000013234	Slirp	93	75.789	ENSFCAG00000036326	SLIRP	86	76.190	Felis_catus
ENSPEMG00000013234	Slirp	69	47.143	ENSFALG00000012583	SLIRP	70	45.946	Ficedula_albicollis
ENSPEMG00000013234	Slirp	96	64.545	ENSFDAG00000008347	SLIRP	86	66.327	Fukomys_damarensis
ENSPEMG00000013234	Slirp	67	51.316	ENSFHEG00000004709	slirp	79	51.316	Fundulus_heteroclitus
ENSPEMG00000013234	Slirp	69	54.286	ENSGMOG00000016948	slirp	69	55.556	Gadus_morhua
ENSPEMG00000013234	Slirp	73	47.297	ENSGALG00000031238	SLIRP	78	47.297	Gallus_gallus
ENSPEMG00000013234	Slirp	70	56.338	ENSGAFG00000010998	slirp	72	58.333	Gambusia_affinis
ENSPEMG00000013234	Slirp	84	48.837	ENSGACG00000020137	slirp	84	52.778	Gasterosteus_aculeatus
ENSPEMG00000013234	Slirp	76	52.874	ENSGAGG00000009953	SLIRP	60	52.874	Gopherus_agassizii
ENSPEMG00000013234	Slirp	75	71.053	ENSGGOG00000011059	-	74	76.812	Gorilla_gorilla
ENSPEMG00000013234	Slirp	95	62.385	ENSHGLG00000018491	SLIRP	88	62.626	Heterocephalus_glaber_female
ENSPEMG00000013234	Slirp	95	62.385	ENSHGLG00100014153	SLIRP	88	62.626	Heterocephalus_glaber_male
ENSPEMG00000013234	Slirp	70	59.155	ENSHCOG00000006795	slirp	73	61.111	Hippocampus_comes
ENSPEMG00000013234	Slirp	69	51.429	ENSIPUG00000010214	SLIRP	74	51.351	Ictalurus_punctatus
ENSPEMG00000013234	Slirp	96	69.091	ENSSTOG00000034316	SLIRP	88	70.707	Ictidomys_tridecemlineatus
ENSPEMG00000013234	Slirp	70	46.479	ENSKMAG00000002038	slirp	69	48.611	Kryptolebias_marmoratus
ENSPEMG00000013234	Slirp	88	49.000	ENSLBEG00000007564	slirp	87	50.000	Labrus_bergylta
ENSPEMG00000013234	Slirp	76	48.315	ENSLACG00000013434	SLIRP	89	47.312	Latimeria_chalumnae
ENSPEMG00000013234	Slirp	96	68.807	ENSMFAG00000042960	SLIRP	83	72.727	Macaca_fascicularis
ENSPEMG00000013234	Slirp	96	66.972	ENSMMUG00000029256	SLIRP	83	72.727	Macaca_mulatta
ENSPEMG00000013234	Slirp	96	68.807	ENSMNEG00000028921	SLIRP	83	72.727	Macaca_nemestrina
ENSPEMG00000013234	Slirp	86	69.318	ENSMLEG00000043644	SLIRP	79	72.727	Mandrillus_leucophaeus
ENSPEMG00000013234	Slirp	69	52.857	ENSMZEG00005004617	slirp	72	54.930	Maylandia_zebra
ENSPEMG00000013234	Slirp	96	76.364	ENSMAUG00000003857	Slirp	88	76.768	Mesocricetus_auratus
ENSPEMG00000013234	Slirp	96	61.818	ENSMICG00000012080	SLIRP	88	64.646	Microcebus_murinus
ENSPEMG00000013234	Slirp	100	81.373	ENSMOCG00000016019	Slirp	89	81.319	Microtus_ochrogaster
ENSPEMG00000013234	Slirp	78	44.944	ENSMMOG00000018268	slirp	88	44.944	Mola_mola
ENSPEMG00000013234	Slirp	69	65.714	ENSMODG00000005207	-	99	65.714	Monodelphis_domestica
ENSPEMG00000013234	Slirp	69	50.000	ENSMALG00000012581	slirp	87	43.529	Monopterus_albus
ENSPEMG00000013234	Slirp	99	72.566	MGP_CAROLIEiJ_G0017995	Slirp	90	76.531	Mus_caroli
ENSPEMG00000013234	Slirp	98	76.000	ENSMUSG00000021040	Slirp	89	79.775	Mus_musculus
ENSPEMG00000013234	Slirp	99	74.336	MGP_SPRETEiJ_G0018840	Slirp	90	77.451	Mus_spretus
ENSPEMG00000013234	Slirp	83	67.368	ENSMLUG00000024998	-	88	65.657	Myotis_lucifugus
ENSPEMG00000013234	Slirp	87	69.697	ENSMLUG00000029544	-	88	69.697	Myotis_lucifugus
ENSPEMG00000013234	Slirp	96	67.890	ENSNGAG00000016363	Slirp	86	73.333	Nannospalax_galili
ENSPEMG00000013234	Slirp	97	57.576	ENSNLEG00000032459	-	83	66.234	Nomascus_leucogenys
ENSPEMG00000013234	Slirp	89	56.436	ENSNLEG00000027238	-	93	61.728	Nomascus_leucogenys
ENSPEMG00000013234	Slirp	99	63.717	ENSODEG00000012580	SLIRP	92	67.308	Octodon_degus
ENSPEMG00000013234	Slirp	69	52.857	ENSONIG00000011692	slirp	72	54.930	Oreochromis_niloticus
ENSPEMG00000013234	Slirp	71	63.889	ENSOANG00000022366	SLIRP	70	64.103	Ornithorhynchus_anatinus
ENSPEMG00000013234	Slirp	69	51.429	ENSORLG00000010761	slirp	55	53.521	Oryzias_latipes
ENSPEMG00000013234	Slirp	69	52.857	ENSORLG00020022188	slirp	71	54.930	Oryzias_latipes_hni
ENSPEMG00000013234	Slirp	89	43.956	ENSORLG00015020171	slirp	70	53.521	Oryzias_latipes_hsok
ENSPEMG00000013234	Slirp	69	54.286	ENSOMEG00000019321	slirp	71	56.338	Oryzias_melastigma
ENSPEMG00000013234	Slirp	75	71.053	ENSPPAG00000040710	-	74	76.812	Pan_paniscus
ENSPEMG00000013234	Slirp	86	80.682	ENSPPRG00000014350	SLIRP	79	81.818	Panthera_pardus
ENSPEMG00000013234	Slirp	86	80.682	ENSPTIG00000014196	SLIRP	79	81.818	Panthera_tigris_altaica
ENSPEMG00000013234	Slirp	75	71.053	ENSPTRG00000030691	SLIRP	74	76.812	Pan_troglodytes
ENSPEMG00000013234	Slirp	96	67.890	ENSPANG00000026323	SLIRP	84	73.077	Papio_anubis
ENSPEMG00000013234	Slirp	60	55.738	ENSPKIG00000008831	slirp	67	52.941	Paramormyrops_kingsleyae
ENSPEMG00000013234	Slirp	68	62.319	ENSPMGG00000010541	slirp	79	62.319	Periophthalmus_magnuspinnatus
ENSPEMG00000013234	Slirp	65	46.970	ENSPMAG00000009355	slirp	76	47.059	Petromyzon_marinus
ENSPEMG00000013234	Slirp	79	62.651	ENSPCIG00000026842	-	87	62.963	Phascolarctos_cinereus
ENSPEMG00000013234	Slirp	69	54.286	ENSPFOG00000006758	slirp	72	55.556	Poecilia_formosa
ENSPEMG00000013234	Slirp	69	54.286	ENSPLAG00000011140	slirp	72	55.556	Poecilia_latipinna
ENSPEMG00000013234	Slirp	69	54.286	ENSPMEG00000019535	slirp	72	55.556	Poecilia_mexicana
ENSPEMG00000013234	Slirp	69	54.286	ENSPREG00000011673	slirp	72	55.556	Poecilia_reticulata
ENSPEMG00000013234	Slirp	96	60.000	ENSPPYG00000006030	SLIRP	87	60.606	Pongo_abelii
ENSPEMG00000013234	Slirp	96	65.455	ENSPCOG00000015159	SLIRP	88	66.667	Propithecus_coquereli
ENSPEMG00000013234	Slirp	77	51.136	ENSPNAG00000008633	slirp	89	51.136	Pygocentrus_nattereri
ENSPEMG00000013234	Slirp	75	72.727	ENSRBIG00000032998	-	71	72.727	Rhinopithecus_bieti
ENSPEMG00000013234	Slirp	96	63.303	ENSRBIG00000035817	-	80	68.889	Rhinopithecus_bieti
ENSPEMG00000013234	Slirp	91	66.667	ENSRBIG00000031396	-	82	68.293	Rhinopithecus_bieti
ENSPEMG00000013234	Slirp	96	67.890	ENSRBIG00000032222	-	83	74.026	Rhinopithecus_bieti
ENSPEMG00000013234	Slirp	91	68.817	ENSRROG00000017133	-	80	74.026	Rhinopithecus_roxellana
ENSPEMG00000013234	Slirp	93	66.316	ENSRROG00000041312	-	81	74.390	Rhinopithecus_roxellana
ENSPEMG00000013234	Slirp	91	65.591	ENSRROG00000035604	-	82	67.073	Rhinopithecus_roxellana
ENSPEMG00000013234	Slirp	96	67.890	ENSRROG00000036656	-	83	74.026	Rhinopithecus_roxellana
ENSPEMG00000013234	Slirp	93	72.632	ENSSBOG00000020014	SLIRP	83	80.519	Saimiri_boliviensis_boliviensis
ENSPEMG00000013234	Slirp	87	49.438	ENSSFOG00015011165	slirp	89	51.136	Scleropages_formosus
ENSPEMG00000013234	Slirp	87	40.449	ENSSMAG00000012930	slirp	74	41.333	Scophthalmus_maximus
ENSPEMG00000013234	Slirp	78	50.562	ENSSDUG00000021883	slirp	58	50.562	Seriola_dumerili
ENSPEMG00000013234	Slirp	78	50.562	ENSSLDG00000023136	slirp	80	50.562	Seriola_lalandi_dorsalis
ENSPEMG00000013234	Slirp	72	47.945	ENSSPUG00000009346	SLIRP	78	51.316	Sphenodon_punctatus
ENSPEMG00000013234	Slirp	69	50.000	ENSSPAG00000013477	slirp	74	48.649	Stegastes_partitus
ENSPEMG00000013234	Slirp	96	67.273	ENSSSCG00000028167	SLIRP	88	70.707	Sus_scrofa
ENSPEMG00000013234	Slirp	69	48.571	ENSTGUG00000012337	SLIRP	72	48.684	Taeniopygia_guttata
ENSPEMG00000013234	Slirp	95	42.857	ENSTRUG00000020127	slirp	88	42.697	Takifugu_rubripes
ENSPEMG00000013234	Slirp	96	69.091	ENSUAMG00000022445	SLIRP	88	69.697	Ursus_americanus
ENSPEMG00000013234	Slirp	96	70.000	ENSUMAG00000007166	SLIRP	88	70.707	Ursus_maritimus
ENSPEMG00000013234	Slirp	96	69.091	ENSVPAG00000001781	SLIRP	88	69.697	Vicugna_pacos
ENSPEMG00000013234	Slirp	83	70.588	ENSVVUG00000004436	SLIRP	88	70.707	Vulpes_vulpes
ENSPEMG00000013234	Slirp	69	55.714	ENSXETG00000030343	SLIRP	79	55.714	Xenopus_tropicalis
ENSPEMG00000013234	Slirp	69	52.857	ENSXCOG00000009422	slirp	72	54.167	Xiphophorus_couchianus
ENSPEMG00000013234	Slirp	69	54.286	ENSXMAG00000015655	slirp	72	55.556	Xiphophorus_maculatus