EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPEMG00000013348 (Gene tree)
Gene ID: 102919996
Gene Symbol: Dkc1
Alias: -
Full Name: dyskerin pseudouridine synthase 1
Gene Type: protein_coding
Species: Peromyscus_maniculatus_bairdii
Status: putative
Strand: Minus strand
Length: 13124 bases
Position: chrKI616880.1:90225-103348
Accession: 102919996
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPEMP00000013272	TruB_N	PF01509.18	1.3e-19	1	1
ENSPEMP00000013281	TruB_N	PF01509.18	1.8e-19	1	1
ENSPEMP00000013272	PUA	PF01472.20	6.6e-18	1	1
ENSPEMP00000013272	DKCLD	PF08068.12	8.8e-32	1	1
ENSPEMP00000013281	DKCLD	PF08068.12	1.5e-31	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPEMT00000017512	-	1260	-	ENSPEMP00000013281	419 (aa)	-	-
ENSPEMT00000017503	-	1326	XM_015990832	ENSPEMP00000013272	441 (aa)	XP_015846318	-

Gene Model

Click here to download ENSPEMG00000013348's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPEMG00000013348's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPEMG00000013348	Dkc1	96	95.897	ENSG00000130826	DKC1	100	84.496	Homo_sapiens
ENSPEMG00000013348	Dkc1	83	85.393	ENSAPOG00000007799	dkc1	65	85.393	Acanthochromis_polyacanthus
ENSPEMG00000013348	Dkc1	88	56.156	ENSAMEG00000002776	DKC1	96	54.728	Ailuropoda_melanoleuca
ENSPEMG00000013348	Dkc1	83	46.953	ENSACIG00000022614	dkc1	81	81.203	Amphilophus_citrinellus
ENSPEMG00000013348	Dkc1	82	85.799	ENSAOCG00000013159	dkc1	67	84.444	Amphiprion_ocellaris
ENSPEMG00000013348	Dkc1	82	85.799	ENSAPEG00000002284	dkc1	66	86.207	Amphiprion_percula
ENSPEMG00000013348	Dkc1	75	80.319	ENSATEG00000013682	dkc1	72	79.558	Anabas_testudineus
ENSPEMG00000013348	Dkc1	83	90.230	ENSACAG00000015600	DKC1	59	90.230	Anolis_carolinensis
ENSPEMG00000013348	Dkc1	95	94.872	ENSANAG00000022732	DKC1	96	57.143	Aotus_nancymaae
ENSPEMG00000013348	Dkc1	73	83.908	ENSACLG00000015605	dkc1	65	83.908	Astatotilapia_calliptera
ENSPEMG00000013348	Dkc1	84	83.978	ENSAMXG00000017108	dkc1	73	83.978	Astyanax_mexicanus
ENSPEMG00000013348	Dkc1	95	95.385	ENSBTAG00000013045	DKC1	97	55.444	Bos_taurus
ENSPEMG00000013348	Dkc1	75	66.901	WBGene00010478	K01G5.5	73	67.403	Caenorhabditis_elegans
ENSPEMG00000013348	Dkc1	96	95.385	ENSCJAG00000004210	DKC1	63	94.949	Callithrix_jacchus
ENSPEMG00000013348	Dkc1	100	96.410	ENSCAFG00000019620	-	97	54.635	Canis_familiaris
ENSPEMG00000013348	Dkc1	81	84.795	ENSCAFG00000009311	-	73	79.487	Canis_familiaris
ENSPEMG00000013348	Dkc1	100	96.410	ENSCAFG00020008918	-	97	54.635	Canis_lupus_dingo
ENSPEMG00000013348	Dkc1	90	59.219	ENSCAFG00020009379	-	85	59.453	Canis_lupus_dingo
ENSPEMG00000013348	Dkc1	99	95.897	ENSCHIG00000017392	DKC1	97	55.444	Capra_hircus
ENSPEMG00000013348	Dkc1	95	95.833	ENSTSYG00000007681	DKC1	80	95.833	Carlito_syrichta
ENSPEMG00000013348	Dkc1	81	99.275	ENSCAPG00000003342	DKC1	99	53.547	Cavia_aperea
ENSPEMG00000013348	Dkc1	100	97.949	ENSCPOG00000008825	DKC1	96	58.954	Cavia_porcellus
ENSPEMG00000013348	Dkc1	96	85.588	ENSCCAG00000027418	DKC1	96	85.588	Cebus_capucinus
ENSPEMG00000013348	Dkc1	96	95.897	ENSCATG00000033602	DKC1	96	57.948	Cercocebus_atys
ENSPEMG00000013348	Dkc1	99	97.884	ENSCLAG00000000720	DKC1	80	97.884	Chinchilla_lanigera
ENSPEMG00000013348	Dkc1	96	95.897	ENSCSAG00000006706	DKC1	96	57.948	Chlorocebus_sabaeus
ENSPEMG00000013348	Dkc1	85	89.080	ENSCPBG00000005858	DKC1	65	89.080	Chrysemys_picta_bellii
ENSPEMG00000013348	Dkc1	82	76.571	ENSCING00000004599	-	69	76.404	Ciona_intestinalis
ENSPEMG00000013348	Dkc1	73	82.069	ENSCSAVG00000010047	-	72	82.069	Ciona_savignyi
ENSPEMG00000013348	Dkc1	96	95.897	ENSCANG00000027987	DKC1	96	57.948	Colobus_angolensis_palliatus
ENSPEMG00000013348	Dkc1	100	98.974	ENSCGRG00001014574	-	100	64.272	Cricetulus_griseus_chok1gshd
ENSPEMG00000013348	Dkc1	100	61.088	ENSCGRG00001016789	-	90	61.088	Cricetulus_griseus_chok1gshd
ENSPEMG00000013348	Dkc1	100	98.974	ENSCGRG00000016075	-	100	64.272	Cricetulus_griseus_crigri
ENSPEMG00000013348	Dkc1	98	61.088	ENSCGRG00000014809	-	79	70.792	Cricetulus_griseus_crigri
ENSPEMG00000013348	Dkc1	84	85.484	ENSCSEG00000012633	dkc1	67	86.207	Cynoglossus_semilaevis
ENSPEMG00000013348	Dkc1	84	83.425	ENSCVAG00000010155	dkc1	63	82.759	Cyprinodon_variegatus
ENSPEMG00000013348	Dkc1	74	84.932	ENSDARG00000016484	dkc1	72	84.530	Danio_rerio
ENSPEMG00000013348	Dkc1	100	95.385	ENSDNOG00000004218	DKC1	96	57.344	Dasypus_novemcinctus
ENSPEMG00000013348	Dkc1	52	84.615	ENSDORG00000013566	-	100	84.615	Dipodomys_ordii
ENSPEMG00000013348	Dkc1	73	60.515	FBgn0259937	Nop60B	88	69.802	Drosophila_melanogaster
ENSPEMG00000013348	Dkc1	89	51.805	ENSETEG00000016095	DKC1	85	54.394	Echinops_telfairi
ENSPEMG00000013348	Dkc1	60	83.333	ENSEBUG00000015962	dkc1	77	54.694	Eptatretus_burgeri
ENSPEMG00000013348	Dkc1	100	96.410	ENSEASG00005007484	DKC1	97	56.126	Equus_asinus_asinus
ENSPEMG00000013348	Dkc1	100	96.410	ENSECAG00000023524	DKC1	97	56.126	Equus_caballus
ENSPEMG00000013348	Dkc1	80	51.282	ENSEEUG00000003323	DKC1	99	51.896	Erinaceus_europaeus
ENSPEMG00000013348	Dkc1	87	78.462	ENSELUG00000014538	dkc1	72	84.358	Esox_lucius
ENSPEMG00000013348	Dkc1	100	95.385	ENSFCAG00000006577	DKC1	96	55.131	Felis_catus
ENSPEMG00000013348	Dkc1	83	49.327	ENSFALG00000011496	DKC1	81	62.868	Ficedula_albicollis
ENSPEMG00000013348	Dkc1	93	97.906	ENSFDAG00000002516	DKC1	95	97.906	Fukomys_damarensis
ENSPEMG00000013348	Dkc1	82	85.057	ENSFHEG00000004627	dkc1	69	82.873	Fundulus_heteroclitus
ENSPEMG00000013348	Dkc1	72	84.828	ENSGMOG00000017277	dkc1	82	84.828	Gadus_morhua
ENSPEMG00000013348	Dkc1	82	51.025	ENSGALG00000005054	DKC1	83	65.038	Gallus_gallus
ENSPEMG00000013348	Dkc1	82	84.211	ENSGAFG00000011486	dkc1	55	84.211	Gambusia_affinis
ENSPEMG00000013348	Dkc1	74	49.500	ENSGACG00000004373	dkc1	96	49.500	Gasterosteus_aculeatus
ENSPEMG00000013348	Dkc1	85	89.655	ENSGAGG00000011330	DKC1	66	89.655	Gopherus_agassizii
ENSPEMG00000013348	Dkc1	96	95.897	ENSGGOG00000001045	DKC1	96	58.551	Gorilla_gorilla
ENSPEMG00000013348	Dkc1	88	78.462	ENSHBUG00000012436	dkc1	67	78.462	Haplochromis_burtoni
ENSPEMG00000013348	Dkc1	96	97.436	ENSHGLG00000000649	DKC1	81	97.436	Heterocephalus_glaber_female
ENSPEMG00000013348	Dkc1	94	97.354	ENSHGLG00100001153	DKC1	80	97.354	Heterocephalus_glaber_male
ENSPEMG00000013348	Dkc1	83	86.550	ENSHCOG00000021099	dkc1	69	86.550	Hippocampus_comes
ENSPEMG00000013348	Dkc1	89	79.703	ENSIPUG00000010309	dkc1	74	79.703	Ictalurus_punctatus
ENSPEMG00000013348	Dkc1	96	62.633	ENSSTOG00000011904	-	93	62.420	Ictidomys_tridecemlineatus
ENSPEMG00000013348	Dkc1	100	69.734	ENSSTOG00000020149	-	100	69.734	Ictidomys_tridecemlineatus
ENSPEMG00000013348	Dkc1	94	96.410	ENSSTOG00000001074	-	100	59.100	Ictidomys_tridecemlineatus
ENSPEMG00000013348	Dkc1	52	85.000	ENSJJAG00000010086	-	100	85.000	Jaculus_jaculus
ENSPEMG00000013348	Dkc1	82	84.795	ENSKMAG00000008010	dkc1	68	83.978	Kryptolebias_marmoratus
ENSPEMG00000013348	Dkc1	82	84.118	ENSLBEG00000019122	dkc1	71	84.000	Labrus_bergylta
ENSPEMG00000013348	Dkc1	84	87.931	ENSLACG00000014025	DKC1	72	87.931	Latimeria_chalumnae
ENSPEMG00000013348	Dkc1	85	48.458	ENSLOCG00000013713	dkc1	64	89.441	Lepisosteus_oculatus
ENSPEMG00000013348	Dkc1	95	93.814	ENSLAFG00000000221	DKC1	81	93.814	Loxodonta_africana
ENSPEMG00000013348	Dkc1	96	95.897	ENSMFAG00000032398	DKC1	69	95.897	Macaca_fascicularis
ENSPEMG00000013348	Dkc1	96	95.897	ENSMMUG00000005768	DKC1	79	94.764	Macaca_mulatta
ENSPEMG00000013348	Dkc1	96	95.897	ENSMNEG00000034503	DKC1	96	57.948	Macaca_nemestrina
ENSPEMG00000013348	Dkc1	96	95.897	ENSMLEG00000034422	DKC1	96	57.948	Mandrillus_leucophaeus
ENSPEMG00000013348	Dkc1	76	84.699	ENSMAMG00000005427	dkc1	74	85.083	Mastacembelus_armatus
ENSPEMG00000013348	Dkc1	88	78.974	ENSMZEG00005014503	dkc1	67	78.974	Maylandia_zebra
ENSPEMG00000013348	Dkc1	74	48.259	ENSMGAG00000009238	DKC1	69	91.304	Meleagris_gallopavo
ENSPEMG00000013348	Dkc1	52	86.923	ENSMAUG00000016454	-	100	86.923	Mesocricetus_auratus
ENSPEMG00000013348	Dkc1	83	97.122	ENSMICG00000002818	-	99	72.093	Microcebus_murinus
ENSPEMG00000013348	Dkc1	96	56.436	ENSMICG00000038751	-	65	94.737	Microcebus_murinus
ENSPEMG00000013348	Dkc1	52	87.795	ENSMOCG00000001169	-	100	87.795	Microtus_ochrogaster
ENSPEMG00000013348	Dkc1	73	83.333	ENSMMOG00000020348	dkc1	69	83.333	Mola_mola
ENSPEMG00000013348	Dkc1	87	51.860	ENSMODG00000009243	DKC1	63	87.179	Monodelphis_domestica
ENSPEMG00000013348	Dkc1	73	82.184	ENSMALG00000009454	dkc1	63	82.184	Monopterus_albus
ENSPEMG00000013348	Dkc1	100	79.418	MGP_CAROLIEiJ_G0033191	Dkc1	100	97.973	Mus_caroli
ENSPEMG00000013348	Dkc1	100	98.462	ENSMUSG00000031403	Dkc1	100	86.897	Mus_musculus
ENSPEMG00000013348	Dkc1	99	99.487	MGP_PahariEiJ_G0031735	Dkc1	100	87.308	Mus_pahari
ENSPEMG00000013348	Dkc1	100	98.462	MGP_SPRETEiJ_G0034351	Dkc1	100	86.538	Mus_spretus
ENSPEMG00000013348	Dkc1	87	94.872	ENSMPUG00000016136	DKC1	93	54.438	Mustela_putorius_furo
ENSPEMG00000013348	Dkc1	52	85.385	ENSNGAG00000015724	-	100	85.385	Nannospalax_galili
ENSPEMG00000013348	Dkc1	73	87.586	ENSNBRG00000005638	dkc1	64	83.908	Neolamprologus_brichardi
ENSPEMG00000013348	Dkc1	96	95.897	ENSNLEG00000014323	DKC1	96	58.350	Nomascus_leucogenys
ENSPEMG00000013348	Dkc1	95	80.711	ENSOPRG00000005248	DKC1	82	80.303	Ochotona_princeps
ENSPEMG00000013348	Dkc1	52	86.154	ENSODEG00000000549	-	100	86.154	Octodon_degus
ENSPEMG00000013348	Dkc1	82	94.872	ENSODEG00000011816	-	72	94.872	Octodon_degus
ENSPEMG00000013348	Dkc1	84	86.034	ENSONIG00000013889	dkc1	71	86.034	Oreochromis_niloticus
ENSPEMG00000013348	Dkc1	88	95.238	ENSOANG00000008713	-	81	95.238	Ornithorhynchus_anatinus
ENSPEMG00000013348	Dkc1	57	96.774	ENSOANG00000022295	-	75	96.774	Ornithorhynchus_anatinus
ENSPEMG00000013348	Dkc1	96	94.872	ENSOCUG00000012646	DKC1	96	57.344	Oryctolagus_cuniculus
ENSPEMG00000013348	Dkc1	81	85.030	ENSORLG00000018748	dkc1	62	83.041	Oryzias_latipes
ENSPEMG00000013348	Dkc1	82	83.140	ENSOMEG00000005786	dkc1	62	83.799	Oryzias_melastigma
ENSPEMG00000013348	Dkc1	96	95.897	ENSOGAG00000003399	DKC1	96	56.213	Otolemur_garnettii
ENSPEMG00000013348	Dkc1	99	93.333	ENSOARG00000003047	DKC1	81	93.333	Ovis_aries
ENSPEMG00000013348	Dkc1	96	95.897	ENSPPAG00000023820	DKC1	81	95.897	Pan_paniscus
ENSPEMG00000013348	Dkc1	87	95.385	ENSPPRG00000009104	DKC1	96	54.930	Panthera_pardus
ENSPEMG00000013348	Dkc1	86	95.789	ENSPTIG00000017469	DKC1	95	53.049	Panthera_tigris_altaica
ENSPEMG00000013348	Dkc1	96	95.897	ENSPTRG00000043416	-	70	95.897	Pan_troglodytes
ENSPEMG00000013348	Dkc1	96	95.897	ENSPTRG00000022449	DKC1	96	58.551	Pan_troglodytes
ENSPEMG00000013348	Dkc1	96	95.897	ENSPANG00000011978	DKC1	96	57.948	Papio_anubis
ENSPEMG00000013348	Dkc1	82	85.380	ENSPKIG00000008443	dkc1	66	85.380	Paramormyrops_kingsleyae
ENSPEMG00000013348	Dkc1	66	92.174	ENSPSIG00000013765	DKC1	66	91.617	Pelodiscus_sinensis
ENSPEMG00000013348	Dkc1	73	50.000	ENSPMGG00000004097	dkc1	73	49.745	Periophthalmus_magnuspinnatus
ENSPEMG00000013348	Dkc1	85	52.655	ENSPCIG00000016706	DKC1	61	87.692	Phascolarctos_cinereus
ENSPEMG00000013348	Dkc1	83	84.916	ENSPFOG00000018653	dkc1	65	85.135	Poecilia_formosa
ENSPEMG00000013348	Dkc1	83	84.916	ENSPLAG00000003272	dkc1	59	85.135	Poecilia_latipinna
ENSPEMG00000013348	Dkc1	83	84.916	ENSPMEG00000010413	dkc1	65	85.135	Poecilia_mexicana
ENSPEMG00000013348	Dkc1	83	84.916	ENSPREG00000004100	dkc1	65	80.000	Poecilia_reticulata
ENSPEMG00000013348	Dkc1	95	95.789	ENSPPYG00000020892	DKC1	96	58.130	Pongo_abelii
ENSPEMG00000013348	Dkc1	68	50.265	ENSPCAG00000015034	DKC1	73	50.532	Procavia_capensis
ENSPEMG00000013348	Dkc1	96	95.897	ENSPCOG00000026874	DKC1	97	58.116	Propithecus_coquereli
ENSPEMG00000013348	Dkc1	99	94.359	ENSPVAG00000009222	DKC1	96	52.410	Pteropus_vampyrus
ENSPEMG00000013348	Dkc1	83	84.884	ENSPNYG00000020063	dkc1	65	86.207	Pundamilia_nyererei
ENSPEMG00000013348	Dkc1	89	80.198	ENSPNAG00000005780	dkc1	74	80.198	Pygocentrus_nattereri
ENSPEMG00000013348	Dkc1	96	50.898	ENSRNOG00000055562	Dkc1	97	51.102	Rattus_norvegicus
ENSPEMG00000013348	Dkc1	96	95.897	ENSRBIG00000028457	DKC1	69	95.897	Rhinopithecus_bieti
ENSPEMG00000013348	Dkc1	96	95.897	ENSRROG00000044780	DKC1	96	57.948	Rhinopithecus_roxellana
ENSPEMG00000013348	Dkc1	71	78.824	YLR175W	-	70	78.824	Saccharomyces_cerevisiae
ENSPEMG00000013348	Dkc1	96	95.385	ENSSBOG00000033746	DKC1	96	58.753	Saimiri_boliviensis_boliviensis
ENSPEMG00000013348	Dkc1	89	52.248	ENSSHAG00000002463	DKC1	77	88.205	Sarcophilus_harrisii
ENSPEMG00000013348	Dkc1	88	81.026	ENSSFOG00015009585	dkc1	77	67.194	Scleropages_formosus
ENSPEMG00000013348	Dkc1	84	87.425	ENSSMAG00000002552	dkc1	66	87.425	Scophthalmus_maximus
ENSPEMG00000013348	Dkc1	82	86.391	ENSSDUG00000009963	dkc1	69	85.135	Seriola_dumerili
ENSPEMG00000013348	Dkc1	73	86.932	ENSSLDG00000019342	dkc1	68	86.207	Seriola_lalandi_dorsalis
ENSPEMG00000013348	Dkc1	91	52.083	ENSSARG00000001822	DKC1	93	52.311	Sorex_araneus
ENSPEMG00000013348	Dkc1	80	90.230	ENSSPUG00000018907	DKC1	75	73.276	Sphenodon_punctatus
ENSPEMG00000013348	Dkc1	84	87.079	ENSSPAG00000002585	dkc1	63	87.079	Stegastes_partitus
ENSPEMG00000013348	Dkc1	100	95.918	ENSSSCG00000012823	DKC1	81	95.918	Sus_scrofa
ENSPEMG00000013348	Dkc1	73	91.304	ENSTGUG00000006781	DKC1	69	91.304	Taeniopygia_guttata
ENSPEMG00000013348	Dkc1	83	85.876	ENSTRUG00000004413	dkc1	65	86.207	Takifugu_rubripes
ENSPEMG00000013348	Dkc1	82	72.973	ENSTNIG00000002582	dkc1	64	85.034	Tetraodon_nigroviridis
ENSPEMG00000013348	Dkc1	62	100.000	ENSTBEG00000011262	DKC1	85	98.113	Tupaia_belangeri
ENSPEMG00000013348	Dkc1	94	94.737	ENSUAMG00000022721	DKC1	64	94.924	Ursus_americanus
ENSPEMG00000013348	Dkc1	94	54.890	ENSUMAG00000016899	DKC1	64	93.909	Ursus_maritimus
ENSPEMG00000013348	Dkc1	99	96.316	ENSVVUG00000020734	-	72	96.316	Vulpes_vulpes
ENSPEMG00000013348	Dkc1	96	58.495	ENSVVUG00000021671	-	91	57.419	Vulpes_vulpes
ENSPEMG00000013348	Dkc1	87	89.503	ENSXETG00000032517	DKC1	68	89.503	Xenopus_tropicalis
ENSPEMG00000013348	Dkc1	83	84.302	ENSXCOG00000005498	dkc1	67	84.302	Xiphophorus_couchianus
ENSPEMG00000013348	Dkc1	83	84.302	ENSXMAG00000004919	dkc1	66	85.235	Xiphophorus_maculatus