EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPEMG00000013850 (Gene tree)
Gene ID: -
Gene Symbol: Ythdc1
Alias: -
Full Name: YTH domain containing 1
Gene Type: protein_coding
Species: Peromyscus_maniculatus_bairdii
Status: putative
Strand: Minus strand
Length: 21111 bases
Position: chrKI615527.1:676708-697818
Accession: 102905181
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPEMP00000013961	YTH	PF04146.15	9.9e-40	1	1
ENSPEMP00000013952	YTH	PF04146.15	1e-39	1	1
ENSPEMP00000013960	YTH	PF04146.15	1.1e-39	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPEMT00000018219	-	2100	-	ENSPEMP00000013961	699 (aa)	-	-
ENSPEMT00000018217	-	2202	-	ENSPEMP00000013960	733 (aa)	-	-
ENSPEMT00000018208	-	2909	XM_016002340	ENSPEMP00000013952	717 (aa)	XP_015857826	-

Gene Model

Click here to download ENSPEMG00000013850's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPEMG00000013850's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPEMG00000013850	Ythdc1	100	97.629	ENSG00000083896	YTHDC1	99	97.629	Homo_sapiens
ENSPEMG00000013850	Ythdc1	58	59.518	ENSAPOG00000013997	ythdc1	57	62.530	Acanthochromis_polyacanthus
ENSPEMG00000013850	Ythdc1	100	96.117	ENSAMEG00000005688	YTHDC1	99	96.117	Ailuropoda_melanoleuca
ENSPEMG00000013850	Ythdc1	70	58.333	ENSACIG00000019728	ythdc1	78	59.809	Amphilophus_citrinellus
ENSPEMG00000013850	Ythdc1	58	61.239	ENSAOCG00000000239	ythdc1	59	67.464	Amphiprion_ocellaris
ENSPEMG00000013850	Ythdc1	50	65.565	ENSAPEG00000000618	ythdc1	53	68.661	Amphiprion_percula
ENSPEMG00000013850	Ythdc1	92	84.337	ENSAPLG00000009921	YTHDC1	92	86.145	Anas_platyrhynchos
ENSPEMG00000013850	Ythdc1	92	84.187	ENSACAG00000009697	YTHDC1	91	84.187	Anolis_carolinensis
ENSPEMG00000013850	Ythdc1	100	97.493	ENSANAG00000001522	YTHDC1	99	97.524	Aotus_nancymaae
ENSPEMG00000013850	Ythdc1	92	51.407	ENSACLG00000019371	ythdc1	59	66.133	Astatotilapia_calliptera
ENSPEMG00000013850	Ythdc1	92	64.768	ENSAMXG00000006978	ythdc1	91	65.396	Astyanax_mexicanus
ENSPEMG00000013850	Ythdc1	92	92.922	ENSBTAG00000015572	YTHDC1	91	93.524	Bos_taurus
ENSPEMG00000013850	Ythdc1	100	97.632	ENSCJAG00000009934	YTHDC1	99	97.632	Callithrix_jacchus
ENSPEMG00000013850	Ythdc1	100	95.978	ENSCAFG00000002821	YTHDC1	99	95.978	Canis_familiaris
ENSPEMG00000013850	Ythdc1	100	95.978	ENSCAFG00020027112	YTHDC1	99	95.978	Canis_lupus_dingo
ENSPEMG00000013850	Ythdc1	92	87.156	ENSCHIG00000004810	YTHDC1	95	92.366	Capra_hircus
ENSPEMG00000013850	Ythdc1	100	97.629	ENSTSYG00000011668	YTHDC1	99	97.629	Carlito_syrichta
ENSPEMG00000013850	Ythdc1	91	70.423	ENSCAPG00000008722	YTHDC1	90	69.350	Cavia_aperea
ENSPEMG00000013850	Ythdc1	100	90.377	ENSCPOG00000010929	YTHDC1	99	90.377	Cavia_porcellus
ENSPEMG00000013850	Ythdc1	100	97.768	ENSCCAG00000035754	YTHDC1	99	97.768	Cebus_capucinus
ENSPEMG00000013850	Ythdc1	100	97.571	ENSCATG00000036320	YTHDC1	99	97.571	Cercocebus_atys
ENSPEMG00000013850	Ythdc1	100	96.853	ENSCLAG00000005482	YTHDC1	99	96.966	Chinchilla_lanigera
ENSPEMG00000013850	Ythdc1	100	97.632	ENSCSAG00000005252	YTHDC1	99	97.632	Chlorocebus_sabaeus
ENSPEMG00000013850	Ythdc1	92	86.898	ENSCPBG00000021965	YTHDC1	94	87.037	Chrysemys_picta_bellii
ENSPEMG00000013850	Ythdc1	100	97.632	ENSCANG00000004769	YTHDC1	99	97.662	Colobus_angolensis_palliatus
ENSPEMG00000013850	Ythdc1	100	99.428	ENSCGRG00001000816	Ythdc1	99	99.428	Cricetulus_griseus_chok1gshd
ENSPEMG00000013850	Ythdc1	100	99.442	ENSCGRG00000009807	Ythdc1	99	99.442	Cricetulus_griseus_crigri
ENSPEMG00000013850	Ythdc1	58	60.132	ENSCSEG00000020404	ythdc1	59	66.667	Cynoglossus_semilaevis
ENSPEMG00000013850	Ythdc1	58	59.202	ENSCVAG00000022349	ythdc1	59	65.542	Cyprinodon_variegatus
ENSPEMG00000013850	Ythdc1	92	63.526	ENSDARG00000051953	ythdc1	58	78.133	Danio_rerio
ENSPEMG00000013850	Ythdc1	92	93.524	ENSDNOG00000004949	YTHDC1	91	94.127	Dasypus_novemcinctus
ENSPEMG00000013850	Ythdc1	100	97.218	ENSDORG00000013045	Ythdc1	100	97.218	Dipodomys_ordii
ENSPEMG00000013850	Ythdc1	78	100.000	ENSETEG00000001878	YTHDC1	77	100.000	Echinops_telfairi
ENSPEMG00000013850	Ythdc1	100	96.533	ENSEASG00005018383	YTHDC1	100	96.471	Equus_asinus_asinus
ENSPEMG00000013850	Ythdc1	100	95.978	ENSECAG00000018303	YTHDC1	100	95.882	Equus_caballus
ENSPEMG00000013850	Ythdc1	92	92.319	ENSEEUG00000015466	YTHDC1	91	92.922	Erinaceus_europaeus
ENSPEMG00000013850	Ythdc1	92	62.038	ENSELUG00000014029	ythdc1	91	63.050	Esox_lucius
ENSPEMG00000013850	Ythdc1	100	96.111	ENSFCAG00000026791	YTHDC1	99	96.111	Felis_catus
ENSPEMG00000013850	Ythdc1	68	89.450	ENSFALG00000006581	YTHDC1	85	93.674	Ficedula_albicollis
ENSPEMG00000013850	Ythdc1	100	96.653	ENSFDAG00000018560	YTHDC1	100	96.653	Fukomys_damarensis
ENSPEMG00000013850	Ythdc1	65	69.811	ENSFHEG00000001286	ythdc1	60	56.024	Fundulus_heteroclitus
ENSPEMG00000013850	Ythdc1	64	63.475	ENSGMOG00000018815	ythdc1	78	63.475	Gadus_morhua
ENSPEMG00000013850	Ythdc1	92	86.295	ENSGALG00000035906	YTHDC1	85	85.994	Gallus_gallus
ENSPEMG00000013850	Ythdc1	51	64.875	ENSGAFG00000001759	ythdc1	54	67.029	Gambusia_affinis
ENSPEMG00000013850	Ythdc1	58	62.150	ENSGACG00000015486	ythdc1	57	62.530	Gasterosteus_aculeatus
ENSPEMG00000013850	Ythdc1	92	87.202	ENSGAGG00000007108	YTHDC1	91	86.905	Gopherus_agassizii
ENSPEMG00000013850	Ythdc1	100	97.429	ENSGGOG00000021958	YTHDC1	99	97.521	Gorilla_gorilla
ENSPEMG00000013850	Ythdc1	92	51.556	ENSHBUG00000019288	ythdc1	59	66.133	Haplochromis_burtoni
ENSPEMG00000013850	Ythdc1	100	96.567	ENSHGLG00000006319	-	99	96.567	Heterocephalus_glaber_female
ENSPEMG00000013850	Ythdc1	95	70.147	ENSHGLG00000003239	-	57	78.708	Heterocephalus_glaber_female
ENSPEMG00000013850	Ythdc1	95	68.668	ENSHGLG00100008060	-	57	76.247	Heterocephalus_glaber_male
ENSPEMG00000013850	Ythdc1	99	95.730	ENSHGLG00100001556	-	100	95.730	Heterocephalus_glaber_male
ENSPEMG00000013850	Ythdc1	53	67.568	ENSHCOG00000001520	ythdc1	82	67.568	Hippocampus_comes
ENSPEMG00000013850	Ythdc1	92	67.208	ENSIPUG00000018136	ythdc1	61	83.527	Ictalurus_punctatus
ENSPEMG00000013850	Ythdc1	100	96.419	ENSSTOG00000013652	YTHDC1	99	97.387	Ictidomys_tridecemlineatus
ENSPEMG00000013850	Ythdc1	92	91.667	ENSJJAG00000010268	Ythdc1	93	93.006	Jaculus_jaculus
ENSPEMG00000013850	Ythdc1	58	60.502	ENSKMAG00000006483	ythdc1	85	65.306	Kryptolebias_marmoratus
ENSPEMG00000013850	Ythdc1	63	62.990	ENSLBEG00000020831	ythdc1	71	73.529	Labrus_bergylta
ENSPEMG00000013850	Ythdc1	88	73.783	ENSLACG00000004893	YTHDC1	92	73.865	Latimeria_chalumnae
ENSPEMG00000013850	Ythdc1	92	72.973	ENSLOCG00000003045	ythdc1	90	88.462	Lepisosteus_oculatus
ENSPEMG00000013850	Ythdc1	92	92.411	ENSLAFG00000021592	YTHDC1	93	93.979	Loxodonta_africana
ENSPEMG00000013850	Ythdc1	100	97.571	ENSMFAG00000031927	YTHDC1	99	97.662	Macaca_fascicularis
ENSPEMG00000013850	Ythdc1	100	97.632	ENSMMUG00000002265	YTHDC1	99	97.658	Macaca_mulatta
ENSPEMG00000013850	Ythdc1	100	97.632	ENSMNEG00000033751	YTHDC1	99	97.662	Macaca_nemestrina
ENSPEMG00000013850	Ythdc1	100	97.632	ENSMLEG00000042147	YTHDC1	99	97.662	Mandrillus_leucophaeus
ENSPEMG00000013850	Ythdc1	56	61.631	ENSMAMG00000013122	ythdc1	58	66.587	Mastacembelus_armatus
ENSPEMG00000013850	Ythdc1	92	51.407	ENSMZEG00005023173	ythdc1	59	66.133	Maylandia_zebra
ENSPEMG00000013850	Ythdc1	92	84.187	ENSMGAG00000010391	YTHDC1	91	85.994	Meleagris_gallopavo
ENSPEMG00000013850	Ythdc1	100	98.999	ENSMAUG00000001286	Ythdc1	99	98.999	Mesocricetus_auratus
ENSPEMG00000013850	Ythdc1	100	97.079	ENSMICG00000034640	YTHDC1	99	96.978	Microcebus_murinus
ENSPEMG00000013850	Ythdc1	100	98.856	ENSMOCG00000020201	Ythdc1	99	98.898	Microtus_ochrogaster
ENSPEMG00000013850	Ythdc1	92	88.688	ENSMODG00000020754	-	91	87.934	Monodelphis_domestica
ENSPEMG00000013850	Ythdc1	96	51.014	ENSMODG00000010076	-	95	51.584	Monodelphis_domestica
ENSPEMG00000013850	Ythdc1	65	57.660	ENSMODG00000009173	-	88	61.353	Monodelphis_domestica
ENSPEMG00000013850	Ythdc1	86	69.248	ENSMODG00000014337	-	94	69.586	Monodelphis_domestica
ENSPEMG00000013850	Ythdc1	57	71.429	ENSMALG00000013412	ythdc1	56	68.768	Monopterus_albus
ENSPEMG00000013850	Ythdc1	100	98.331	MGP_CAROLIEiJ_G0027347	Ythdc1	99	98.331	Mus_caroli
ENSPEMG00000013850	Ythdc1	100	98.192	ENSMUSG00000035851	Ythdc1	99	98.192	Mus_musculus
ENSPEMG00000013850	Ythdc1	100	98.609	MGP_PahariEiJ_G0017126	Ythdc1	99	98.609	Mus_pahari
ENSPEMG00000013850	Ythdc1	100	98.470	MGP_SPRETEiJ_G0028339	Ythdc1	99	98.470	Mus_spretus
ENSPEMG00000013850	Ythdc1	100	96.374	ENSMLUG00000016300	YTHDC1	100	96.374	Myotis_lucifugus
ENSPEMG00000013850	Ythdc1	60	95.952	ENSNGAG00000024000	Ythdc1	93	95.724	Nannospalax_galili
ENSPEMG00000013850	Ythdc1	60	62.121	ENSNBRG00000007663	ythdc1	70	66.355	Neolamprologus_brichardi
ENSPEMG00000013850	Ythdc1	99	96.836	ENSNLEG00000009202	YTHDC1	99	96.836	Nomascus_leucogenys
ENSPEMG00000013850	Ythdc1	83	81.605	ENSMEUG00000007128	YTHDC1	81	81.605	Notamacropus_eugenii
ENSPEMG00000013850	Ythdc1	76	98.300	ENSOPRG00000008986	YTHDC1	74	98.300	Ochotona_princeps
ENSPEMG00000013850	Ythdc1	100	96.374	ENSODEG00000001715	YTHDC1	99	96.374	Octodon_degus
ENSPEMG00000013850	Ythdc1	92	51.852	ENSONIG00000012651	ythdc1	59	66.590	Oreochromis_niloticus
ENSPEMG00000013850	Ythdc1	89	77.217	ENSOANG00000014398	YTHDC1	55	97.215	Ornithorhynchus_anatinus
ENSPEMG00000013850	Ythdc1	93	81.081	ENSOCUG00000015886	YTHDC1	57	95.477	Oryctolagus_cuniculus
ENSPEMG00000013850	Ythdc1	57	60.870	ENSORLG00000030544	ythdc1	60	66.747	Oryzias_latipes
ENSPEMG00000013850	Ythdc1	57	60.145	ENSORLG00020019316	ythdc1	60	66.747	Oryzias_latipes_hni
ENSPEMG00000013850	Ythdc1	57	61.275	ENSOMEG00000000551	ythdc1	60	65.281	Oryzias_melastigma
ENSPEMG00000013850	Ythdc1	100	97.071	ENSOGAG00000003362	YTHDC1	99	97.071	Otolemur_garnettii
ENSPEMG00000013850	Ythdc1	92	92.922	ENSOARG00000008633	YTHDC1	91	93.524	Ovis_aries
ENSPEMG00000013850	Ythdc1	100	97.568	ENSPPAG00000041315	YTHDC1	99	97.655	Pan_paniscus
ENSPEMG00000013850	Ythdc1	100	96.154	ENSPPRG00000011979	YTHDC1	99	96.159	Panthera_pardus
ENSPEMG00000013850	Ythdc1	100	95.869	ENSPTIG00000015527	YTHDC1	100	96.016	Panthera_tigris_altaica
ENSPEMG00000013850	Ythdc1	100	97.568	ENSPTRG00000016105	YTHDC1	99	97.655	Pan_troglodytes
ENSPEMG00000013850	Ythdc1	100	97.571	ENSPANG00000021590	YTHDC1	99	97.571	Papio_anubis
ENSPEMG00000013850	Ythdc1	92	68.195	ENSPKIG00000018497	ythdc1	91	67.847	Paramormyrops_kingsleyae
ENSPEMG00000013850	Ythdc1	92	86.596	ENSPSIG00000002782	YTHDC1	92	86.295	Pelodiscus_sinensis
ENSPEMG00000013850	Ythdc1	92	88.537	ENSPCIG00000006870	YTHDC1	91	87.783	Phascolarctos_cinereus
ENSPEMG00000013850	Ythdc1	58	59.318	ENSPFOG00000013404	ythdc1	60	65.385	Poecilia_formosa
ENSPEMG00000013850	Ythdc1	58	59.318	ENSPLAG00000011079	ythdc1	85	65.385	Poecilia_latipinna
ENSPEMG00000013850	Ythdc1	58	59.318	ENSPMEG00000009238	ythdc1	60	65.385	Poecilia_mexicana
ENSPEMG00000013850	Ythdc1	70	58.894	ENSPREG00000016973	ythdc1	59	59.799	Poecilia_reticulata
ENSPEMG00000013850	Ythdc1	88	97.785	ENSPPYG00000014726	YTHDC1	100	97.785	Pongo_abelii
ENSPEMG00000013850	Ythdc1	77	89.091	ENSPCAG00000009607	YTHDC1	75	88.636	Procavia_capensis
ENSPEMG00000013850	Ythdc1	92	89.286	ENSPCOG00000019105	YTHDC1	92	90.015	Propithecus_coquereli
ENSPEMG00000013850	Ythdc1	92	91.454	ENSPVAG00000015551	YTHDC1	93	89.343	Pteropus_vampyrus
ENSPEMG00000013850	Ythdc1	92	51.407	ENSPNYG00000011687	ythdc1	59	66.133	Pundamilia_nyererei
ENSPEMG00000013850	Ythdc1	92	69.853	ENSPNAG00000028365	ythdc1	91	69.208	Pygocentrus_nattereri
ENSPEMG00000013850	Ythdc1	100	96.708	ENSRNOG00000001996	Ythdc1	99	97.671	Rattus_norvegicus
ENSPEMG00000013850	Ythdc1	99	96.561	ENSRBIG00000028279	YTHDC1	99	96.561	Rhinopithecus_bieti
ENSPEMG00000013850	Ythdc1	100	97.632	ENSRROG00000035028	YTHDC1	99	97.662	Rhinopithecus_roxellana
ENSPEMG00000013850	Ythdc1	100	97.571	ENSSBOG00000022353	YTHDC1	99	97.662	Saimiri_boliviensis_boliviensis
ENSPEMG00000013850	Ythdc1	92	88.688	ENSSHAG00000002538	YTHDC1	91	87.934	Sarcophilus_harrisii
ENSPEMG00000013850	Ythdc1	92	68.538	ENSSFOG00015003298	ythdc1	60	85.782	Scleropages_formosus
ENSPEMG00000013850	Ythdc1	57	60.090	ENSSMAG00000009086	ythdc1	92	52.983	Scophthalmus_maximus
ENSPEMG00000013850	Ythdc1	56	60.775	ENSSDUG00000022008	ythdc1	59	67.048	Seriola_dumerili
ENSPEMG00000013850	Ythdc1	56	60.775	ENSSLDG00000007926	ythdc1	59	67.048	Seriola_lalandi_dorsalis
ENSPEMG00000013850	Ythdc1	80	97.232	ENSSARG00000010960	YTHDC1	100	97.232	Sorex_araneus
ENSPEMG00000013850	Ythdc1	92	82.309	ENSSPUG00000009357	YTHDC1	91	84.301	Sphenodon_punctatus
ENSPEMG00000013850	Ythdc1	58	62.156	ENSSPAG00000011449	ythdc1	59	67.464	Stegastes_partitus
ENSPEMG00000013850	Ythdc1	100	95.574	ENSSSCG00000035505	YTHDC1	100	95.507	Sus_scrofa
ENSPEMG00000013850	Ythdc1	92	86.145	ENSTGUG00000004452	-	91	85.843	Taeniopygia_guttata
ENSPEMG00000013850	Ythdc1	63	69.231	ENSTRUG00000010142	ythdc1	69	69.231	Takifugu_rubripes
ENSPEMG00000013850	Ythdc1	86	59.870	ENSTNIG00000013243	ythdc1	88	65.349	Tetraodon_nigroviridis
ENSPEMG00000013850	Ythdc1	92	87.576	ENSTBEG00000011546	YTHDC1	91	87.424	Tupaia_belangeri
ENSPEMG00000013850	Ythdc1	92	92.643	ENSTTRG00000005083	YTHDC1	91	93.093	Tursiops_truncatus
ENSPEMG00000013850	Ythdc1	94	96.171	ENSUAMG00000010388	YTHDC1	100	96.171	Ursus_americanus
ENSPEMG00000013850	Ythdc1	100	83.543	ENSUMAG00000013668	YTHDC1	99	82.627	Ursus_maritimus
ENSPEMG00000013850	Ythdc1	100	96.567	ENSVPAG00000009040	YTHDC1	99	96.567	Vicugna_pacos
ENSPEMG00000013850	Ythdc1	100	95.062	ENSVVUG00000005387	YTHDC1	100	96.029	Vulpes_vulpes
ENSPEMG00000013850	Ythdc1	92	73.842	ENSXETG00000017960	ythdc1	91	73.204	Xenopus_tropicalis
ENSPEMG00000013850	Ythdc1	50	52.206	ENSXCOG00000000530	ythdc1	78	55.785	Xiphophorus_couchianus
ENSPEMG00000013850	Ythdc1	57	59.762	ENSXMAG00000005196	ythdc1	61	64.908	Xiphophorus_maculatus