EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPEMG00000013920 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Peromyscus_maniculatus_bairdii
Status: putative
Strand: Minus strand
Length: 724 bases
Position: chrKI615346.1:1946637-1947360
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPEMP00000014006	LSM	PF01423.22	6e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPEMT00000018266	-	669	-	ENSPEMP00000014006	222 (aa)	-	-

Gene Model

Click here to download ENSPEMG00000013920's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPEMG00000013920's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPEMG00000013920	-	88	82.710	ENSPEMG00000020979	-	89	84.038
ENSPEMG00000013920	-	100	89.583	ENSPEMG00000012911	-	100	89.583
ENSPEMG00000013920	-	91	80.543	ENSPEMG00000007948	Snrpb	96	80.090

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPEMG00000013920	-	100	89.583	ENSG00000128739	SNRPN	100	100.000	Homo_sapiens
ENSPEMG00000013920	-	91	86.818	ENSAMEG00000007034	SNRPN	90	86.364	Ailuropoda_melanoleuca
ENSPEMG00000013920	-	100	89.583	ENSANAG00000034241	SNRPN	100	89.583	Aotus_nancymaae
ENSPEMG00000013920	-	91	85.973	ENSBTAG00000008251	SNRPN	96	84.977	Bos_taurus
ENSPEMG00000013920	-	100	89.583	ENSCJAG00000003759	-	100	89.583	Callithrix_jacchus
ENSPEMG00000013920	-	88	86.385	ENSCJAG00000042622	-	89	85.915	Callithrix_jacchus
ENSPEMG00000013920	-	91	86.878	ENSCAFG00000010127	SNRPN	92	86.425	Canis_familiaris
ENSPEMG00000013920	-	91	86.878	ENSCAFG00020024075	SNRPN	92	86.425	Canis_lupus_dingo
ENSPEMG00000013920	-	95	86.463	ENSCHIG00000017477	SNRPN	96	85.520	Capra_hircus
ENSPEMG00000013920	-	100	89.583	ENSTSYG00000005248	SNRPN	100	89.583	Carlito_syrichta
ENSPEMG00000013920	-	100	89.583	ENSCAPG00000003047	SNRPN	100	89.583	Cavia_aperea
ENSPEMG00000013920	-	100	89.583	ENSCPOG00000020270	SNRPN	100	89.583	Cavia_porcellus
ENSPEMG00000013920	-	100	89.583	ENSCCAG00000024231	SNRPN	100	89.583	Cebus_capucinus
ENSPEMG00000013920	-	100	89.583	ENSCATG00000032518	SNRPN	100	89.583	Cercocebus_atys
ENSPEMG00000013920	-	100	89.583	ENSCLAG00000011376	SNRPN	100	89.583	Chinchilla_lanigera
ENSPEMG00000013920	-	100	89.583	ENSCSAG00000006406	SNRPN	100	89.583	Chlorocebus_sabaeus
ENSPEMG00000013920	-	85	85.507	ENSCHOG00000001846	SNRPN	78	85.024	Choloepus_hoffmanni
ENSPEMG00000013920	-	100	89.583	ENSCANG00000041156	SNRPN	100	89.583	Colobus_angolensis_palliatus
ENSPEMG00000013920	-	100	89.583	ENSCGRG00001004136	Snrpn	100	89.583	Cricetulus_griseus_chok1gshd
ENSPEMG00000013920	-	88	85.915	ENSCGRG00000001621	Snrpn	89	85.446	Cricetulus_griseus_crigri
ENSPEMG00000013920	-	70	79.191	ENSCVAG00000014193	SNRPN	69	77.381	Cyprinodon_variegatus
ENSPEMG00000013920	-	87	85.849	ENSDNOG00000037060	SNRPN	87	85.377	Dasypus_novemcinctus
ENSPEMG00000013920	-	88	86.385	ENSDORG00000004527	Snrpn	89	85.915	Dipodomys_ordii
ENSPEMG00000013920	-	91	86.878	ENSEASG00005017871	SNRPN	92	86.425	Equus_asinus_asinus
ENSPEMG00000013920	-	91	86.878	ENSECAG00000018148	SNRPN	92	86.425	Equus_caballus
ENSPEMG00000013920	-	91	85.909	ENSEEUG00000007440	-	92	85.455	Erinaceus_europaeus
ENSPEMG00000013920	-	95	87.336	ENSFCAG00000022298	-	93	86.425	Felis_catus
ENSPEMG00000013920	-	88	86.385	ENSFDAG00000016578	-	89	85.915	Fukomys_damarensis
ENSPEMG00000013920	-	74	74.317	ENSFDAG00000010528	-	86	72.678	Fukomys_damarensis
ENSPEMG00000013920	-	100	89.583	ENSGGOG00000003988	SNRPN	100	89.583	Gorilla_gorilla
ENSPEMG00000013920	-	89	64.651	ENSGGOG00000024469	-	69	69.343	Gorilla_gorilla
ENSPEMG00000013920	-	89	70.283	ENSHGLG00000020936	-	88	68.421	Heterocephalus_glaber_female
ENSPEMG00000013920	-	100	79.654	ENSHGLG00000002327	-	88	79.412	Heterocephalus_glaber_female
ENSPEMG00000013920	-	100	89.583	ENSHGLG00000011924	SNRPN	100	89.583	Heterocephalus_glaber_female
ENSPEMG00000013920	-	88	80.751	ENSHGLG00000019812	-	89	78.873	Heterocephalus_glaber_female
ENSPEMG00000013920	-	100	77.056	ENSHGLG00100004881	-	88	77.451	Heterocephalus_glaber_male
ENSPEMG00000013920	-	100	89.583	ENSHGLG00100016559	SNRPN	100	89.583	Heterocephalus_glaber_male
ENSPEMG00000013920	-	88	80.751	ENSHGLG00100021056	-	89	78.873	Heterocephalus_glaber_male
ENSPEMG00000013920	-	100	89.583	ENSSTOG00000001339	SNRPN	100	89.583	Ictidomys_tridecemlineatus
ENSPEMG00000013920	-	87	86.321	ENSLAFG00000009458	SNRPN	88	85.849	Loxodonta_africana
ENSPEMG00000013920	-	100	89.583	ENSMFAG00000042235	SNRPN	100	89.583	Macaca_fascicularis
ENSPEMG00000013920	-	100	89.583	ENSMMUG00000023139	SNURF	100	89.583	Macaca_mulatta
ENSPEMG00000013920	-	100	89.583	ENSMNEG00000031291	SNRPN	100	89.583	Macaca_nemestrina
ENSPEMG00000013920	-	100	89.583	ENSMLEG00000038837	SNRPN	100	89.583	Mandrillus_leucophaeus
ENSPEMG00000013920	-	91	73.636	ENSMGAG00000008696	SNRPN	92	73.182	Meleagris_gallopavo
ENSPEMG00000013920	-	100	89.583	ENSMAUG00000000051	Snrpn	100	89.583	Mesocricetus_auratus
ENSPEMG00000013920	-	100	89.583	ENSMICG00000042356	SNRPN	100	89.583	Microcebus_murinus
ENSPEMG00000013920	-	100	89.583	ENSMOCG00000015350	Snrpn	100	89.583	Microtus_ochrogaster
ENSPEMG00000013920	-	91	81.900	ENSMODG00000013926	-	92	81.448	Monodelphis_domestica
ENSPEMG00000013920	-	100	89.583	MGP_CAROLIEiJ_G0029815	Snrpn	100	89.583	Mus_caroli
ENSPEMG00000013920	-	100	89.583	ENSMUSG00000102252	Snrpn	100	89.583	Mus_musculus
ENSPEMG00000013920	-	100	89.583	MGP_PahariEiJ_G0013040	Snrpn	100	89.583	Mus_pahari
ENSPEMG00000013920	-	100	89.583	MGP_SPRETEiJ_G0030918	Snrpn	100	89.583	Mus_spretus
ENSPEMG00000013920	-	98	47.210	ENSMPUG00000007115	-	64	58.571	Mustela_putorius_furo
ENSPEMG00000013920	-	91	86.878	ENSMPUG00000014638	-	92	86.425	Mustela_putorius_furo
ENSPEMG00000013920	-	95	54.185	ENSMLUG00000024428	-	62	53.731	Myotis_lucifugus
ENSPEMG00000013920	-	91	86.364	ENSMLUG00000023361	-	90	85.909	Myotis_lucifugus
ENSPEMG00000013920	-	84	49.282	ENSMLUG00000025849	-	58	53.968	Myotis_lucifugus
ENSPEMG00000013920	-	100	89.583	ENSNGAG00000000181	Snrpn	100	89.583	Nannospalax_galili
ENSPEMG00000013920	-	88	77.619	ENSNLEG00000001376	SNRPN	70	98.795	Nomascus_leucogenys
ENSPEMG00000013920	-	100	84.167	ENSODEG00000019708	-	89	85.446	Octodon_degus
ENSPEMG00000013920	-	97	72.222	ENSODEG00000016065	-	87	73.913	Octodon_degus
ENSPEMG00000013920	-	88	86.385	ENSODEG00000013478	-	89	85.915	Octodon_degus
ENSPEMG00000013920	-	88	87.324	ENSODEG00000020110	-	89	85.915	Octodon_degus
ENSPEMG00000013920	-	88	86.449	ENSOCUG00000003532	-	89	85.047	Oryctolagus_cuniculus
ENSPEMG00000013920	-	72	79.661	ENSORLG00020007490	SNRPN	69	77.976	Oryzias_latipes_hni
ENSPEMG00000013920	-	72	79.661	ENSORLG00015003332	SNRPN	69	77.976	Oryzias_latipes_hsok
ENSPEMG00000013920	-	72	80.226	ENSOMEG00000002066	SNRPN	69	78.571	Oryzias_melastigma
ENSPEMG00000013920	-	100	89.583	ENSOGAG00000007392	SNRPN	100	89.583	Otolemur_garnettii
ENSPEMG00000013920	-	91	85.973	ENSOARG00000009080	SNRPN	92	85.520	Ovis_aries
ENSPEMG00000013920	-	97	61.538	ENSPPAG00000034049	-	86	62.201	Pan_paniscus
ENSPEMG00000013920	-	100	89.583	ENSPPAG00000027650	SNRPN	100	89.583	Pan_paniscus
ENSPEMG00000013920	-	84	60.697	ENSPPRG00000006957	-	73	61.905	Panthera_pardus
ENSPEMG00000013920	-	91	86.878	ENSPPRG00000019878	-	92	86.425	Panthera_pardus
ENSPEMG00000013920	-	95	86.900	ENSPTIG00000004537	SNRPN	92	85.973	Panthera_tigris_altaica
ENSPEMG00000013920	-	100	89.583	ENSPTRG00000006826	SNRPN	100	89.583	Pan_troglodytes
ENSPEMG00000013920	-	97	61.966	ENSPTRG00000052400	-	65	67.133	Pan_troglodytes
ENSPEMG00000013920	-	100	89.583	ENSPANG00000020142	SNRPN	100	89.583	Papio_anubis
ENSPEMG00000013920	-	74	82.967	ENSPCIG00000004699	-	68	82.075	Phascolarctos_cinereus
ENSPEMG00000013920	-	70	79.769	ENSPMEG00000020674	SNRPN	69	77.976	Poecilia_mexicana
ENSPEMG00000013920	-	100	89.583	ENSPPYG00000006269	SNURF	100	89.583	Pongo_abelii
ENSPEMG00000013920	-	100	89.583	ENSPCOG00000014231	SNRPN	100	89.583	Propithecus_coquereli
ENSPEMG00000013920	-	100	89.583	ENSRNOG00000059764	Snrpn	100	89.583	Rattus_norvegicus
ENSPEMG00000013920	-	100	89.583	ENSRBIG00000041765	SNRPN	100	89.583	Rhinopithecus_bieti
ENSPEMG00000013920	-	100	89.583	ENSRROG00000035157	SNRPN	100	89.583	Rhinopithecus_roxellana
ENSPEMG00000013920	-	100	89.583	ENSSBOG00000000110	-	100	89.583	Saimiri_boliviensis_boliviensis
ENSPEMG00000013920	-	91	86.425	ENSSBOG00000024929	-	92	85.973	Saimiri_boliviensis_boliviensis
ENSPEMG00000013920	-	74	83.060	ENSSHAG00000010257	-	87	82.075	Sarcophilus_harrisii
ENSPEMG00000013920	-	95	86.842	ENSSSCG00000028124	SNRPN	95	85.973	Sus_scrofa
ENSPEMG00000013920	-	91	85.973	ENSTTRG00000010966	SNRPN	82	85.520	Tursiops_truncatus
ENSPEMG00000013920	-	92	86.996	ENSUAMG00000016284	SNRPN	75	86.047	Ursus_americanus
ENSPEMG00000013920	-	91	86.878	ENSUMAG00000025589	SNRPN	92	86.425	Ursus_maritimus
ENSPEMG00000013920	-	95	87.336	ENSVVUG00000017971	SNRPN	91	86.425	Vulpes_vulpes