EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPEMG00000013978 (Gene tree)
Gene ID: 102913969
Gene Symbol: -
Alias: -
Full Name: La ribonucleoprotein domain family member 7
Gene Type: protein_coding
Species: Peromyscus_maniculatus_bairdii
Status: putative
Strand: Plus strand
Length: 11775 bases
Position: chrKI615321.1:15882457-15894231
Accession: 102913969
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPEMP00000014095	RRM_1	PF00076.22	2e-18	1	1
ENSPEMP00000014095	RRM_3	PF08777.11	8.3e-30	1	1
ENSPEMP00000014095	La	PF05383.17	1.4e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPEMT00000018360	-	1755	XM_006970400	ENSPEMP00000014095	584 (aa)	XP_006970462	-

Gene Model

Click here to download ENSPEMG00000013978's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPEMG00000013978's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPEMG00000013978	-	96	82.270	ENSG00000174720	LARP7	95	81.996	Homo_sapiens
ENSPEMG00000013978	-	98	55.290	ENSAPOG00000014570	larp7	95	54.833	Acanthochromis_polyacanthus
ENSPEMG00000013978	-	96	81.172	ENSAMEG00000015642	LARP7	95	80.893	Ailuropoda_melanoleuca
ENSPEMG00000013978	-	98	52.641	ENSACIG00000023850	larp7	94	51.910	Amphilophus_citrinellus
ENSPEMG00000013978	-	96	54.371	ENSAOCG00000016160	larp7	95	54.130	Amphiprion_ocellaris
ENSPEMG00000013978	-	96	54.371	ENSAPEG00000021823	larp7	95	54.130	Amphiprion_percula
ENSPEMG00000013978	-	98	55.877	ENSATEG00000016238	larp7	95	54.974	Anabas_testudineus
ENSPEMG00000013978	-	99	67.545	ENSAPLG00000012887	LARP7	94	66.782	Anas_platyrhynchos
ENSPEMG00000013978	-	99	64.775	ENSACAG00000010662	LARP7	91	65.674	Anolis_carolinensis
ENSPEMG00000013978	-	96	81.062	ENSANAG00000031139	-	95	80.783	Aotus_nancymaae
ENSPEMG00000013978	-	96	65.364	ENSANAG00000022318	-	94	65.893	Aotus_nancymaae
ENSPEMG00000013978	-	98	53.310	ENSAMXG00000002549	larp7	94	52.705	Astyanax_mexicanus
ENSPEMG00000013978	-	100	79.287	ENSBTAG00000009632	LARP7	97	79.352	Bos_taurus
ENSPEMG00000013978	-	96	81.883	ENSCJAG00000003711	LARP7	95	82.321	Callithrix_jacchus
ENSPEMG00000013978	-	96	79.685	ENSCAFG00000011715	LARP7	100	78.727	Canis_familiaris
ENSPEMG00000013978	-	96	80.995	ENSCAFG00020017225	LARP7	100	79.966	Canis_lupus_dingo
ENSPEMG00000013978	-	100	66.837	ENSCHIG00000013971	-	95	71.004	Capra_hircus
ENSPEMG00000013978	-	96	80.284	ENSCHIG00000014163	-	100	79.287	Capra_hircus
ENSPEMG00000013978	-	96	73.262	ENSTSYG00000035188	-	97	72.987	Carlito_syrichta
ENSPEMG00000013978	-	90	81.749	ENSTSYG00000006769	-	100	80.616	Carlito_syrichta
ENSPEMG00000013978	-	100	70.819	ENSCAPG00000009328	LARP7	98	71.799	Cavia_aperea
ENSPEMG00000013978	-	100	78.669	ENSCPOG00000011830	LARP7	99	79.412	Cavia_porcellus
ENSPEMG00000013978	-	96	73.524	ENSCCAG00000023563	-	100	73.703	Cebus_capucinus
ENSPEMG00000013978	-	96	82.478	ENSCCAG00000026787	-	95	82.206	Cebus_capucinus
ENSPEMG00000013978	-	96	81.883	ENSCATG00000043535	LARP7	100	80.678	Cercocebus_atys
ENSPEMG00000013978	-	100	80.717	ENSCLAG00000005894	LARP7	100	80.887	Chinchilla_lanigera
ENSPEMG00000013978	-	96	82.060	ENSCSAG00000003810	LARP7	100	80.847	Chlorocebus_sabaeus
ENSPEMG00000013978	-	100	79.727	ENSCHOG00000002379	-	95	81.216	Choloepus_hoffmanni
ENSPEMG00000013978	-	93	71.585	ENSCHOG00000008967	-	100	71.403	Choloepus_hoffmanni
ENSPEMG00000013978	-	96	67.586	ENSCPBG00000004919	LARP7	96	69.031	Chrysemys_picta_bellii
ENSPEMG00000013978	-	67	36.970	ENSCING00000021685	-	74	36.478	Ciona_intestinalis
ENSPEMG00000013978	-	96	82.270	ENSCANG00000031482	LARP7	99	80.711	Colobus_angolensis_palliatus
ENSPEMG00000013978	-	90	81.285	ENSCGRG00001012747	-	99	81.664	Cricetulus_griseus_chok1gshd
ENSPEMG00000013978	-	100	90.956	ENSCGRG00001025050	-	100	90.785	Cricetulus_griseus_chok1gshd
ENSPEMG00000013978	-	96	83.393	ENSCGRG00000001141	-	100	83.571	Cricetulus_griseus_crigri
ENSPEMG00000013978	-	96	82.143	ENSCGRG00000007642	-	99	82.500	Cricetulus_griseus_crigri
ENSPEMG00000013978	-	98	53.043	ENSDARG00000017315	larp7	93	52.244	Danio_rerio
ENSPEMG00000013978	-	100	79.899	ENSDNOG00000013761	LARP7	100	80.405	Dasypus_novemcinctus
ENSPEMG00000013978	-	96	82.593	ENSDORG00000008896	-	95	82.321	Dipodomys_ordii
ENSPEMG00000013978	-	96	77.442	ENSETEG00000011692	LARP7	95	77.143	Echinops_telfairi
ENSPEMG00000013978	-	96	81.172	ENSEASG00005005592	LARP7	95	81.429	Equus_asinus_asinus
ENSPEMG00000013978	-	96	81.172	ENSECAG00000000834	LARP7	95	81.429	Equus_caballus
ENSPEMG00000013978	-	96	76.868	ENSEEUG00000012824	LARP7	100	76.868	Erinaceus_europaeus
ENSPEMG00000013978	-	98	52.525	ENSELUG00000015341	larp7	88	75.691	Esox_lucius
ENSPEMG00000013978	-	96	81.883	ENSFCAG00000031966	LARP7	95	81.607	Felis_catus
ENSPEMG00000013978	-	99	67.993	ENSFALG00000000972	LARP7	92	68.815	Ficedula_albicollis
ENSPEMG00000013978	-	96	81.350	ENSFDAG00000014048	-	100	80.034	Fukomys_damarensis
ENSPEMG00000013978	-	100	74.446	ENSFDAG00000011855	-	100	74.363	Fukomys_damarensis
ENSPEMG00000013978	-	97	54.087	ENSFHEG00000021652	larp7	95	53.403	Fundulus_heteroclitus
ENSPEMG00000013978	-	99	67.330	ENSGALG00000012048	LARP7	94	66.376	Gallus_gallus
ENSPEMG00000013978	-	99	52.295	ENSGACG00000019618	larp7	79	71.667	Gasterosteus_aculeatus
ENSPEMG00000013978	-	96	67.010	ENSGAGG00000024520	LARP7	95	68.448	Gopherus_agassizii
ENSPEMG00000013978	-	96	82.447	ENSGGOG00000023567	-	95	82.175	Gorilla_gorilla
ENSPEMG00000013978	-	88	78.988	ENSGGOG00000006438	-	97	78.794	Gorilla_gorilla
ENSPEMG00000013978	-	96	80.319	ENSHGLG00000002716	LARP7	100	79.046	Heterocephalus_glaber_female
ENSPEMG00000013978	-	96	80.319	ENSHGLG00100000332	LARP7	100	79.046	Heterocephalus_glaber_male
ENSPEMG00000013978	-	97	53.436	ENSIPUG00000019886	larp7	94	53.217	Ictalurus_punctatus
ENSPEMG00000013978	-	100	80.782	ENSSTOG00000011789	LARP7	100	81.803	Ictidomys_tridecemlineatus
ENSPEMG00000013978	-	100	82.423	ENSJJAG00000000257	-	100	82.594	Jaculus_jaculus
ENSPEMG00000013978	-	99	58.472	ENSLACG00000013744	LARP7	95	60.377	Latimeria_chalumnae
ENSPEMG00000013978	-	96	49.745	ENSLOCG00000011608	larp7	95	49.492	Lepisosteus_oculatus
ENSPEMG00000013978	-	100	80.678	ENSLAFG00000015769	LARP7	95	82.143	Loxodonta_africana
ENSPEMG00000013978	-	96	82.060	ENSMFAG00000036506	LARP7	95	82.321	Macaca_fascicularis
ENSPEMG00000013978	-	96	82.060	ENSMMUG00000017911	LARP7	95	82.321	Macaca_mulatta
ENSPEMG00000013978	-	96	82.060	ENSMNEG00000034758	LARP7	100	80.626	Macaca_nemestrina
ENSPEMG00000013978	-	96	82.060	ENSMLEG00000026154	LARP7	100	80.847	Mandrillus_leucophaeus
ENSPEMG00000013978	-	99	67.391	ENSMGAG00000010947	LARP7	95	67.487	Meleagris_gallopavo
ENSPEMG00000013978	-	100	75.597	ENSMAUG00000005625	-	100	75.939	Mesocricetus_auratus
ENSPEMG00000013978	-	96	82.238	ENSMICG00000031035	LARP7	95	83.214	Microcebus_murinus
ENSPEMG00000013978	-	100	91.453	ENSMOCG00000012519	-	100	91.282	Microtus_ochrogaster
ENSPEMG00000013978	-	90	87.810	ENSMOCG00000015761	-	100	87.238	Microtus_ochrogaster
ENSPEMG00000013978	-	99	70.248	ENSMODG00000005669	LARP7	100	70.413	Monodelphis_domestica
ENSPEMG00000013978	-	100	89.949	MGP_CAROLIEiJ_G0025613	-	100	89.438	Mus_caroli
ENSPEMG00000013978	-	100	89.267	ENSMUSG00000027968	Larp7	100	95.062	Mus_musculus
ENSPEMG00000013978	-	100	89.932	MGP_PahariEiJ_G0027060	-	100	89.761	Mus_pahari
ENSPEMG00000013978	-	100	89.966	MGP_SPRETEiJ_G0026566	Larp7	100	89.796	Mus_spretus
ENSPEMG00000013978	-	95	76.840	ENSMPUG00000018052	-	100	77.199	Mustela_putorius_furo
ENSPEMG00000013978	-	96	81.350	ENSMPUG00000008331	-	100	80.475	Mustela_putorius_furo
ENSPEMG00000013978	-	87	74.755	ENSMLUG00000027214	LARP7	100	74.755	Myotis_lucifugus
ENSPEMG00000013978	-	100	82.483	ENSNGAG00000007368	-	100	82.823	Nannospalax_galili
ENSPEMG00000013978	-	96	81.528	ENSNLEG00000016354	LARP7	94	81.786	Nomascus_leucogenys
ENSPEMG00000013978	-	88	70.690	ENSMEUG00000004739	LARP7	100	68.582	Notamacropus_eugenii
ENSPEMG00000013978	-	85	87.218	ENSOPRG00000009594	-	87	87.218	Ochotona_princeps
ENSPEMG00000013978	-	96	77.402	ENSODEG00000011121	LARP7	98	77.580	Octodon_degus
ENSPEMG00000013978	-	99	71.429	ENSOANG00000009298	LARP7	99	71.429	Ornithorhynchus_anatinus
ENSPEMG00000013978	-	100	78.475	ENSOCUG00000007073	LARP7	100	78.644	Oryctolagus_cuniculus
ENSPEMG00000013978	-	96	51.858	ENSORLG00000004978	larp7	94	51.779	Oryzias_latipes
ENSPEMG00000013978	-	96	52.035	ENSORLG00020013825	larp7	94	51.957	Oryzias_latipes_hni
ENSPEMG00000013978	-	97	53.628	ENSOMEG00000006920	larp7	94	53.381	Oryzias_melastigma
ENSPEMG00000013978	-	96	83.009	ENSOGAG00000001643	LARP7	95	82.740	Otolemur_garnettii
ENSPEMG00000013978	-	96	80.212	ENSOARG00000001809	LARP7	100	79.223	Ovis_aries
ENSPEMG00000013978	-	96	81.915	ENSPPAG00000038420	LARP7	94	81.996	Pan_paniscus
ENSPEMG00000013978	-	96	81.206	ENSPPRG00000023256	LARP7	95	81.462	Panthera_pardus
ENSPEMG00000013978	-	92	80.926	ENSPTIG00000021146	LARP7	92	80.633	Panthera_tigris_altaica
ENSPEMG00000013978	-	96	82.270	ENSPTRG00000016380	LARP7	95	81.996	Pan_troglodytes
ENSPEMG00000013978	-	96	82.447	ENSPANG00000006701	LARP7	99	80.711	Papio_anubis
ENSPEMG00000013978	-	98	56.441	ENSPKIG00000023484	larp7	94	56.348	Paramormyrops_kingsleyae
ENSPEMG00000013978	-	99	67.057	ENSPSIG00000014419	LARP7	93	67.308	Pelodiscus_sinensis
ENSPEMG00000013978	-	96	71.698	ENSPCIG00000020284	LARP7	98	80.342	Phascolarctos_cinereus
ENSPEMG00000013978	-	98	53.859	ENSPFOG00000000265	larp7	95	52.911	Poecilia_formosa
ENSPEMG00000013978	-	98	53.571	ENSPLAG00000012181	larp7	94	53.603	Poecilia_latipinna
ENSPEMG00000013978	-	98	53.571	ENSPMEG00000007182	larp7	94	53.603	Poecilia_mexicana
ENSPEMG00000013978	-	96	82.270	ENSPPYG00000015010	LARP7	95	81.996	Pongo_abelii
ENSPEMG00000013978	-	58	100.000	ENSPCAG00000003373	-	66	100.000	Procavia_capensis
ENSPEMG00000013978	-	92	70.577	ENSPCOG00000023946	LARP7	94	71.536	Propithecus_coquereli
ENSPEMG00000013978	-	100	78.003	ENSPVAG00000000282	LARP7	100	77.834	Pteropus_vampyrus
ENSPEMG00000013978	-	96	53.633	ENSPNAG00000017554	larp7	94	53.217	Pygocentrus_nattereri
ENSPEMG00000013978	-	100	87.223	ENSRNOG00000048989	Larp7	100	87.053	Rattus_norvegicus
ENSPEMG00000013978	-	82	92.593	ENSRBIG00000031916	LARP7	99	92.593	Rhinopithecus_bieti
ENSPEMG00000013978	-	96	82.238	ENSRROG00000033414	LARP7	100	80.678	Rhinopithecus_roxellana
ENSPEMG00000013978	-	96	62.167	ENSSBOG00000022652	-	95	61.854	Saimiri_boliviensis_boliviensis
ENSPEMG00000013978	-	96	82.478	ENSSBOG00000030886	-	95	82.206	Saimiri_boliviensis_boliviensis
ENSPEMG00000013978	-	96	70.812	ENSSHAG00000008153	LARP7	95	70.660	Sarcophilus_harrisii
ENSPEMG00000013978	-	98	54.778	ENSSFOG00015019344	larp7	94	54.530	Scleropages_formosus
ENSPEMG00000013978	-	96	55.846	ENSSMAG00000011296	larp7	94	54.138	Scophthalmus_maximus
ENSPEMG00000013978	-	99	54.195	ENSSDUG00000007045	larp7	95	53.012	Seriola_dumerili
ENSPEMG00000013978	-	52	70.833	ENSSARG00000000190	-	99	70.192	Sorex_araneus
ENSPEMG00000013978	-	98	54.329	ENSSPAG00000016066	larp7	95	53.846	Stegastes_partitus
ENSPEMG00000013978	-	96	80.674	ENSSSCG00000009119	LARP7	95	80.392	Sus_scrofa
ENSPEMG00000013978	-	99	68.509	ENSTGUG00000001804	LARP7	95	69.190	Taeniopygia_guttata
ENSPEMG00000013978	-	97	50.532	ENSTRUG00000004996	larp7	95	50.356	Takifugu_rubripes
ENSPEMG00000013978	-	99	48.595	ENSTNIG00000007183	larp7	95	48.532	Tetraodon_nigroviridis
ENSPEMG00000013978	-	96	78.508	ENSTBEG00000009188	LARP7	95	78.214	Tupaia_belangeri
ENSPEMG00000013978	-	91	76.735	ENSTTRG00000005233	LARP7	100	79.174	Tursiops_truncatus
ENSPEMG00000013978	-	96	80.639	ENSUAMG00000000836	LARP7	95	80.357	Ursus_americanus
ENSPEMG00000013978	-	95	80.180	ENSUMAG00000002263	LARP7	93	79.891	Ursus_maritimus
ENSPEMG00000013978	-	96	80.817	ENSVPAG00000010502	LARP7	95	80.714	Vicugna_pacos
ENSPEMG00000013978	-	96	81.172	ENSVVUG00000002274	LARP7	100	80.136	Vulpes_vulpes
ENSPEMG00000013978	-	99	62.000	ENSXETG00000024097	larp7	94	61.913	Xenopus_tropicalis
ENSPEMG00000013978	-	98	52.705	ENSXCOG00000004883	larp7	83	73.333	Xiphophorus_couchianus