EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPEMG00000014598 (Gene tree)
Gene ID: 102918906
Gene Symbol: Prdm4
Alias: -
Full Name: PR/SET domain 4
Gene Type: protein_coding
Species: Peromyscus_maniculatus_bairdii
Status: putative
Strand: Plus strand
Length: 23067 bases
Position: chrKI615633.1:1580933-1603999
Accession: 102918906
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPEMP00000014958	zf-C2H2	PF00096.26	2e-20	1	2
ENSPEMP00000014958	zf-C2H2	PF00096.26	2e-20	2	2
ENSPEMP00000014963	zf-C2H2	PF00096.26	2.2e-20	1	2
ENSPEMP00000014963	zf-C2H2	PF00096.26	2.2e-20	2	2
ENSPEMP00000014958	zf-met	PF12874.7	0.00011	1	1
ENSPEMP00000014963	zf-met	PF12874.7	0.00011	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPEMT00000019240	-	2774	XM_006986958	ENSPEMP00000014958	797 (aa)	XP_006987020	UPI00042AEE2C
ENSPEMT00000019245	-	2421	-	ENSPEMP00000014963	806 (aa)	-	-

Gene Model

Click here to download ENSPEMG00000014598's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPEMG00000014598's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPEMG00000014598	Prdm4	100	95.609	ENSG00000110851	PRDM4	99	95.609	Homo_sapiens
ENSPEMG00000014598	Prdm4	100	94.862	ENSAMEG00000016174	PRDM4	99	94.862	Ailuropoda_melanoleuca
ENSPEMG00000014598	Prdm4	100	86.575	ENSAPLG00000009846	PRDM4	99	86.324	Anas_platyrhynchos
ENSPEMG00000014598	Prdm4	100	95.483	ENSANAG00000024800	PRDM4	99	95.483	Aotus_nancymaae
ENSPEMG00000014598	Prdm4	100	95.107	ENSBTAG00000012999	PRDM4	99	95.107	Bos_taurus
ENSPEMG00000014598	Prdm4	100	95.232	ENSCJAG00000015261	PRDM4	99	95.232	Callithrix_jacchus
ENSPEMG00000014598	Prdm4	100	95.232	ENSCAFG00000001788	PRDM4	99	95.232	Canis_familiaris
ENSPEMG00000014598	Prdm4	100	95.232	ENSCAFG00020004916	PRDM4	99	95.232	Canis_lupus_dingo
ENSPEMG00000014598	Prdm4	100	94.856	ENSCHIG00000019409	PRDM4	99	94.856	Capra_hircus
ENSPEMG00000014598	Prdm4	100	95.232	ENSTSYG00000009248	PRDM4	99	95.232	Carlito_syrichta
ENSPEMG00000014598	Prdm4	100	90.238	ENSCAPG00000013937	PRDM4	100	90.125	Cavia_aperea
ENSPEMG00000014598	Prdm4	100	89.689	ENSCPOG00000022385	PRDM4	100	89.689	Cavia_porcellus
ENSPEMG00000014598	Prdm4	100	95.609	ENSCCAG00000036033	PRDM4	99	95.609	Cebus_capucinus
ENSPEMG00000014598	Prdm4	100	95.232	ENSCATG00000044797	PRDM4	99	95.232	Cercocebus_atys
ENSPEMG00000014598	Prdm4	100	91.418	ENSCLAG00000007545	PRDM4	100	91.915	Chinchilla_lanigera
ENSPEMG00000014598	Prdm4	100	95.483	ENSCSAG00000002896	PRDM4	99	95.483	Chlorocebus_sabaeus
ENSPEMG00000014598	Prdm4	71	96.226	ENSCHOG00000001744	PRDM4	85	96.226	Choloepus_hoffmanni
ENSPEMG00000014598	Prdm4	100	86.449	ENSCPBG00000023187	PRDM4	100	86.951	Chrysemys_picta_bellii
ENSPEMG00000014598	Prdm4	100	95.358	ENSCANG00000021804	PRDM4	99	95.358	Colobus_angolensis_palliatus
ENSPEMG00000014598	Prdm4	100	97.015	ENSCGRG00001015102	-	100	97.015	Cricetulus_griseus_chok1gshd
ENSPEMG00000014598	Prdm4	96	96.903	ENSCGRG00000004044	-	100	96.903	Cricetulus_griseus_crigri
ENSPEMG00000014598	Prdm4	100	94.605	ENSDNOG00000032478	PRDM4	99	95.245	Dasypus_novemcinctus
ENSPEMG00000014598	Prdm4	100	80.552	ENSDORG00000015081	-	100	80.678	Dipodomys_ordii
ENSPEMG00000014598	Prdm4	94	45.429	ENSEBUG00000003775	prdm4	99	45.706	Eptatretus_burgeri
ENSPEMG00000014598	Prdm4	100	95.483	ENSECAG00000015423	PRDM4	99	95.610	Equus_caballus
ENSPEMG00000014598	Prdm4	94	91.611	ENSEEUG00000006569	PRDM4	99	91.877	Erinaceus_europaeus
ENSPEMG00000014598	Prdm4	99	60.267	ENSELUG00000015265	prdm4	99	60.510	Esox_lucius
ENSPEMG00000014598	Prdm4	100	95.358	ENSFCAG00000022478	PRDM4	99	95.358	Felis_catus
ENSPEMG00000014598	Prdm4	100	86.324	ENSFALG00000013342	PRDM4	100	86.198	Ficedula_albicollis
ENSPEMG00000014598	Prdm4	100	86.358	ENSGALG00000012619	PRDM4	99	86.108	Gallus_gallus
ENSPEMG00000014598	Prdm4	100	86.073	ENSGAGG00000002763	PRDM4	95	86.575	Gopherus_agassizii
ENSPEMG00000014598	Prdm4	100	95.483	ENSGGOG00000001244	PRDM4	99	95.483	Gorilla_gorilla
ENSPEMG00000014598	Prdm4	100	92.095	ENSHGLG00000004590	PRDM4	99	91.646	Heterocephalus_glaber_female
ENSPEMG00000014598	Prdm4	100	91.180	ENSHGLG00100007464	PRDM4	100	91.056	Heterocephalus_glaber_male
ENSPEMG00000014598	Prdm4	95	61.010	ENSIPUG00000024162	prdm4	94	61.061	Ictalurus_punctatus
ENSPEMG00000014598	Prdm4	100	94.856	ENSSTOG00000016168	PRDM4	99	94.856	Ictidomys_tridecemlineatus
ENSPEMG00000014598	Prdm4	100	95.094	ENSJJAG00000022448	-	95	94.038	Jaculus_jaculus
ENSPEMG00000014598	Prdm4	100	71.906	ENSLACG00000007452	PRDM4	99	72.401	Latimeria_chalumnae
ENSPEMG00000014598	Prdm4	79	41.953	ENSLOCG00000017092	prdm4	100	54.113	Lepisosteus_oculatus
ENSPEMG00000014598	Prdm4	98	94.670	ENSLAFG00000001483	PRDM4	100	94.670	Loxodonta_africana
ENSPEMG00000014598	Prdm4	100	95.609	ENSMFAG00000041862	PRDM4	99	95.609	Macaca_fascicularis
ENSPEMG00000014598	Prdm4	100	95.609	ENSMMUG00000015550	PRDM4	99	95.609	Macaca_mulatta
ENSPEMG00000014598	Prdm4	100	95.358	ENSMNEG00000032319	PRDM4	99	95.358	Macaca_nemestrina
ENSPEMG00000014598	Prdm4	100	95.483	ENSMLEG00000039607	PRDM4	99	95.483	Mandrillus_leucophaeus
ENSPEMG00000014598	Prdm4	100	78.500	ENSMGAG00000012815	PRDM4	100	78.250	Meleagris_gallopavo
ENSPEMG00000014598	Prdm4	100	94.354	ENSMICG00000007807	PRDM4	99	94.422	Microcebus_murinus
ENSPEMG00000014598	Prdm4	100	97.491	ENSMOCG00000000753	Prdm4	99	97.491	Microtus_ochrogaster
ENSPEMG00000014598	Prdm4	100	96.110	ENSMUSG00000035529	Prdm4	100	95.985	Mus_musculus
ENSPEMG00000014598	Prdm4	100	96.361	MGP_PahariEiJ_G0031398	Prdm4	100	96.361	Mus_pahari
ENSPEMG00000014598	Prdm4	100	96.738	MGP_SPRETEiJ_G0016505	Prdm4	100	96.738	Mus_spretus
ENSPEMG00000014598	Prdm4	100	88.889	ENSMPUG00000012238	PRDM4	99	88.140	Mustela_putorius_furo
ENSPEMG00000014598	Prdm4	100	95.358	ENSMLUG00000000767	PRDM4	99	95.358	Myotis_lucifugus
ENSPEMG00000014598	Prdm4	100	96.612	ENSNGAG00000018627	Prdm4	100	96.612	Nannospalax_galili
ENSPEMG00000014598	Prdm4	100	95.483	ENSNLEG00000006748	PRDM4	99	95.483	Nomascus_leucogenys
ENSPEMG00000014598	Prdm4	89	86.854	ENSMEUG00000004495	PRDM4	89	86.854	Notamacropus_eugenii
ENSPEMG00000014598	Prdm4	89	94.643	ENSOPRG00000010192	PRDM4	89	94.643	Ochotona_princeps
ENSPEMG00000014598	Prdm4	100	88.959	ENSODEG00000014750	PRDM4	99	89.460	Octodon_degus
ENSPEMG00000014598	Prdm4	100	89.210	ENSOANG00000005526	PRDM4	99	89.210	Ornithorhynchus_anatinus
ENSPEMG00000014598	Prdm4	94	95.279	ENSOCUG00000012859	PRDM4	96	95.279	Oryctolagus_cuniculus
ENSPEMG00000014598	Prdm4	100	95.483	ENSOGAG00000011945	PRDM4	100	95.483	Otolemur_garnettii
ENSPEMG00000014598	Prdm4	100	94.730	ENSOARG00000017955	PRDM4	99	94.730	Ovis_aries
ENSPEMG00000014598	Prdm4	100	95.859	ENSPPAG00000038438	PRDM4	99	95.859	Pan_paniscus
ENSPEMG00000014598	Prdm4	100	95.358	ENSPPRG00000004144	PRDM4	99	95.358	Panthera_pardus
ENSPEMG00000014598	Prdm4	100	95.358	ENSPTIG00000005847	PRDM4	99	95.358	Panthera_tigris_altaica
ENSPEMG00000014598	Prdm4	100	95.609	ENSPTRG00000005400	PRDM4	99	95.609	Pan_troglodytes
ENSPEMG00000014598	Prdm4	100	95.609	ENSPANG00000022084	PRDM4	99	95.609	Papio_anubis
ENSPEMG00000014598	Prdm4	99	59.857	ENSPKIG00000000875	prdm4	99	60.095	Paramormyrops_kingsleyae
ENSPEMG00000014598	Prdm4	92	80.492	ENSPSIG00000012066	PRDM4	100	80.492	Pelodiscus_sinensis
ENSPEMG00000014598	Prdm4	100	87.500	ENSPCIG00000009471	PRDM4	99	87.500	Phascolarctos_cinereus
ENSPEMG00000014598	Prdm4	100	95.483	ENSPPYG00000004913	PRDM4	99	95.483	Pongo_abelii
ENSPEMG00000014598	Prdm4	83	94.175	ENSPCAG00000009987	PRDM4	83	94.175	Procavia_capensis
ENSPEMG00000014598	Prdm4	100	94.228	ENSPCOG00000021060	PRDM4	99	94.228	Propithecus_coquereli
ENSPEMG00000014598	Prdm4	100	94.486	ENSPVAG00000001596	PRDM4	99	94.737	Pteropus_vampyrus
ENSPEMG00000014598	Prdm4	100	96.366	ENSRNOG00000004962	Prdm4	100	96.366	Rattus_norvegicus
ENSPEMG00000014598	Prdm4	100	95.358	ENSRBIG00000035488	PRDM4	99	95.358	Rhinopithecus_bieti
ENSPEMG00000014598	Prdm4	100	95.483	ENSRROG00000012779	PRDM4	99	95.483	Rhinopithecus_roxellana
ENSPEMG00000014598	Prdm4	100	95.734	ENSSBOG00000000403	PRDM4	99	95.734	Saimiri_boliviensis_boliviensis
ENSPEMG00000014598	Prdm4	99	63.132	ENSSFOG00015023358	prdm4	98	62.885	Scleropages_formosus
ENSPEMG00000014598	Prdm4	100	95.232	ENSSSCG00000000160	PRDM4	99	95.232	Sus_scrofa
ENSPEMG00000014598	Prdm4	100	86.575	ENSTGUG00000010962	-	99	86.449	Taeniopygia_guttata
ENSPEMG00000014598	Prdm4	74	88.908	ENSTBEG00000001732	PRDM4	84	88.908	Tupaia_belangeri
ENSPEMG00000014598	Prdm4	100	95.358	ENSTTRG00000011056	PRDM4	99	95.358	Tursiops_truncatus
ENSPEMG00000014598	Prdm4	100	95.232	ENSUAMG00000022796	PRDM4	99	95.232	Ursus_americanus
ENSPEMG00000014598	Prdm4	100	95.232	ENSUMAG00000017231	PRDM4	99	95.232	Ursus_maritimus
ENSPEMG00000014598	Prdm4	100	95.358	ENSVPAG00000002215	PRDM4	100	95.358	Vicugna_pacos
ENSPEMG00000014598	Prdm4	100	95.232	ENSVVUG00000023397	PRDM4	99	95.232	Vulpes_vulpes