EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPEMG00000014672 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Peromyscus_maniculatus_bairdii
Status: putative
Strand: Plus strand
Length: 98632 bases
Position: chrKI615325.1:4289555-4388186
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPEMP00000015057	ResIII	PF04851.15	3.4e-08	1	1
ENSPEMP00000015042	ResIII	PF04851.15	8.3e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPEMT00000019327	-	2834	-	ENSPEMP00000015042	920 (aa)	-	-
ENSPEMT00000019338	-	1452	-	ENSPEMP00000015052	483 (aa)	-	-
ENSPEMT00000019343	-	1641	-	ENSPEMP00000015057	546 (aa)	-	-

Gene Model

Click here to download ENSPEMG00000014672's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPEMG00000014672's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPEMG00000014672	-	95	72.797	ENSPEMG00000021081	-	90	62.854
ENSPEMG00000014672	-	88	41.221	ENSPEMG00000014799	Chd5	51	39.854
ENSPEMG00000014672	-	68	36.641	ENSPEMG00000017579	Hells	56	39.648

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPEMG00000014672	-	95	94.615	ENSG00000124177	CHD6	90	85.821	Homo_sapiens
ENSPEMG00000014672	-	100	97.253	ENSANAG00000037548	CHD6	100	97.253	Aotus_nancymaae
ENSPEMG00000014672	-	100	97.070	ENSCJAG00000017920	CHD6	100	97.070	Callithrix_jacchus
ENSPEMG00000014672	-	100	95.604	ENSCAFG00020012906	CHD6	100	95.604	Canis_lupus_dingo
ENSPEMG00000014672	-	100	97.253	ENSCCAG00000036828	CHD6	100	97.253	Cebus_capucinus
ENSPEMG00000014672	-	100	97.253	ENSCATG00000039248	CHD6	100	97.253	Cercocebus_atys
ENSPEMG00000014672	-	100	97.253	ENSCANG00000043435	CHD6	100	97.253	Colobus_angolensis_palliatus
ENSPEMG00000014672	-	100	98.901	ENSCGRG00000006749	-	100	98.901	Cricetulus_griseus_crigri
ENSPEMG00000014672	-	100	95.971	ENSEASG00005023433	CHD6	100	95.971	Equus_asinus_asinus
ENSPEMG00000014672	-	61	92.515	ENSGAGG00000007475	-	79	92.711	Gopherus_agassizii
ENSPEMG00000014672	-	100	97.253	ENSGGOG00000013123	CHD6	100	97.253	Gorilla_gorilla
ENSPEMG00000014672	-	100	97.253	ENSMFAG00000032830	CHD6	100	97.253	Macaca_fascicularis
ENSPEMG00000014672	-	100	97.253	ENSMMUG00000020458	CHD6	100	97.253	Macaca_mulatta
ENSPEMG00000014672	-	100	97.253	ENSMNEG00000040847	CHD6	100	97.253	Macaca_nemestrina
ENSPEMG00000014672	-	100	97.253	ENSMLEG00000031965	CHD6	100	97.253	Mandrillus_leucophaeus
ENSPEMG00000014672	-	100	97.619	ENSMICG00000016641	CHD6	100	97.619	Microcebus_murinus
ENSPEMG00000014672	-	97	97.197	ENSMOCG00000014004	-	98	97.197	Microtus_ochrogaster
ENSPEMG00000014672	-	99	92.844	MGP_CAROLIEiJ_G0024604	Chd6	74	96.233	Mus_caroli
ENSPEMG00000014672	-	99	92.844	ENSMUSG00000057133	Chd6	74	96.233	Mus_musculus
ENSPEMG00000014672	-	99	92.844	MGP_PahariEiJ_G0026048	Chd6	74	96.575	Mus_pahari
ENSPEMG00000014672	-	99	92.844	MGP_SPRETEiJ_G0025526	Chd6	74	96.347	Mus_spretus
ENSPEMG00000014672	-	96	84.190	ENSORLG00020021891	chd6	99	84.190	Oryzias_latipes_hni
ENSPEMG00000014672	-	100	97.253	ENSPTRG00000013504	CHD6	99	97.253	Pan_troglodytes
ENSPEMG00000014672	-	100	97.436	ENSPANG00000025554	CHD6	100	97.436	Papio_anubis
ENSPEMG00000014672	-	96	82.163	ENSPREG00000022653	chd6	99	85.348	Poecilia_reticulata
ENSPEMG00000014672	-	100	97.070	ENSPCOG00000001089	CHD6	100	97.070	Propithecus_coquereli
ENSPEMG00000014672	-	100	97.253	ENSSBOG00000022089	CHD6	99	97.253	Saimiri_boliviensis_boliviensis
ENSPEMG00000014672	-	100	95.604	ENSUAMG00000024036	CHD6	100	95.604	Ursus_americanus
ENSPEMG00000014672	-	100	95.604	ENSUMAG00000002017	CHD6	100	95.604	Ursus_maritimus