EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPEMG00000014773 (Gene tree)
Gene ID: 102906471
Gene Symbol: -
Alias: -
Full Name: small nuclear ribonucleoprotein D1 polypeptide
Gene Type: protein_coding
Species: Peromyscus_maniculatus_bairdii
Status: putative
Strand: Minus strand
Length: 14781 bases
Position: chrKI616037.1:17625-32405
Accession: 102906471
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPEMP00000015178	LSM	PF01423.22	6.5e-19	1	1
ENSPEMP00000015182	LSM	PF01423.22	7.1e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPEMT00000019469	-	372	-	ENSPEMP00000015182	123 (aa)	-	-
ENSPEMT00000019465	-	607	XM_006994193	ENSPEMP00000015178	119 (aa)	XP_006994255	UPI0000006BEC

Gene Model

Click here to download ENSPEMG00000014773's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPEMG00000014773's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPEMG00000014773	-	84	30.000	ENSPEMG00000022884	Lsm10	61	32.432
ENSPEMG00000014773	-	86	84.314	ENSPEMG00000008600	-	84	84.314
ENSPEMG00000014773	-	57	34.722	ENSPEMG00000004437	Lsm2	76	34.722

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPEMG00000014773	-	100	100.000	ENSG00000167088	SNRPD1	100	100.000	Homo_sapiens
ENSPEMG00000014773	-	100	96.639	ENSAPOG00000019446	snrpd1	65	96.639	Acanthochromis_polyacanthus
ENSPEMG00000014773	-	98	98.291	ENSAMEG00000002576	SNRPD1	100	100.000	Ailuropoda_melanoleuca
ENSPEMG00000014773	-	94	96.429	ENSACIG00000011263	snrpd1	100	96.429	Amphilophus_citrinellus
ENSPEMG00000014773	-	100	96.639	ENSAOCG00000007406	snrpd1	100	96.639	Amphiprion_ocellaris
ENSPEMG00000014773	-	94	96.429	ENSAPEG00000012539	SNRPD1	100	96.429	Amphiprion_percula
ENSPEMG00000014773	-	100	92.437	ENSAPEG00000014961	snrpd1	100	92.437	Amphiprion_percula
ENSPEMG00000014773	-	100	96.639	ENSATEG00000014399	snrpd1	100	96.639	Anabas_testudineus
ENSPEMG00000014773	-	97	100.000	ENSAPLG00000012256	SNRPD1	100	98.319	Anas_platyrhynchos
ENSPEMG00000014773	-	100	100.000	ENSACAG00000006364	SNRPD1	100	100.000	Anolis_carolinensis
ENSPEMG00000014773	-	100	100.000	ENSANAG00000025641	SNRPD1	100	100.000	Aotus_nancymaae
ENSPEMG00000014773	-	94	96.429	ENSACLG00000017406	snrpd1	100	96.429	Astatotilapia_calliptera
ENSPEMG00000014773	-	100	97.479	ENSAMXG00000004589	snrpd1	100	97.479	Astyanax_mexicanus
ENSPEMG00000014773	-	95	95.726	ENSBTAG00000047266	-	98	95.726	Bos_taurus
ENSPEMG00000014773	-	100	100.000	ENSBTAG00000008292	SNRPD1	100	100.000	Bos_taurus
ENSPEMG00000014773	-	97	96.522	ENSBTAG00000012376	-	86	96.522	Bos_taurus
ENSPEMG00000014773	-	79	94.681	ENSBTAG00000055316	-	87	90.099	Bos_taurus
ENSPEMG00000014773	-	74	80.682	WBGene00004916	snr-3	76	76.042	Caenorhabditis_elegans
ENSPEMG00000014773	-	100	100.000	ENSCJAG00000042955	SNRPD1	100	100.000	Callithrix_jacchus
ENSPEMG00000014773	-	100	100.000	ENSCAFG00000018247	SNRPD1	100	100.000	Canis_familiaris
ENSPEMG00000014773	-	80	100.000	ENSCAFG00020015914	SNRPD1	74	100.000	Canis_lupus_dingo
ENSPEMG00000014773	-	100	97.479	ENSCHIG00000005557	SNRPD1	100	97.479	Capra_hircus
ENSPEMG00000014773	-	100	100.000	ENSTSYG00000030028	SNRPD1	100	100.000	Carlito_syrichta
ENSPEMG00000014773	-	97	99.130	ENSCAPG00000008103	SNRPD1	100	98.276	Cavia_aperea
ENSPEMG00000014773	-	100	100.000	ENSCPOG00000004679	SNRPD1	100	100.000	Cavia_porcellus
ENSPEMG00000014773	-	100	96.639	ENSCCAG00000016652	-	100	96.639	Cebus_capucinus
ENSPEMG00000014773	-	100	100.000	ENSCCAG00000032658	SNRPD1	100	100.000	Cebus_capucinus
ENSPEMG00000014773	-	100	99.160	ENSCCAG00000020611	-	100	99.160	Cebus_capucinus
ENSPEMG00000014773	-	81	95.833	ENSCCAG00000005390	-	81	95.833	Cebus_capucinus
ENSPEMG00000014773	-	100	100.000	ENSCATG00000039978	SNRPD1	100	100.000	Cercocebus_atys
ENSPEMG00000014773	-	100	100.000	ENSCLAG00000008691	SNRPD1	100	100.000	Chinchilla_lanigera
ENSPEMG00000014773	-	100	100.000	ENSCSAG00000017654	SNRPD1	100	100.000	Chlorocebus_sabaeus
ENSPEMG00000014773	-	100	100.000	ENSCPBG00000023143	SNRPD1	100	100.000	Chrysemys_picta_bellii
ENSPEMG00000014773	-	72	87.209	ENSCING00000024100	-	69	87.209	Ciona_intestinalis
ENSPEMG00000014773	-	73	85.057	ENSCSAVG00000004578	-	70	85.057	Ciona_savignyi
ENSPEMG00000014773	-	81	75.000	ENSCGRG00001009945	-	85	75.000	Cricetulus_griseus_chok1gshd
ENSPEMG00000014773	-	100	100.000	ENSCGRG00001021055	-	100	100.000	Cricetulus_griseus_chok1gshd
ENSPEMG00000014773	-	100	100.000	ENSCGRG00000000490	-	100	100.000	Cricetulus_griseus_crigri
ENSPEMG00000014773	-	81	75.000	ENSCGRG00000006224	-	85	75.000	Cricetulus_griseus_crigri
ENSPEMG00000014773	-	80	94.737	ENSCSEG00000018141	snrpd1	81	94.792	Cynoglossus_semilaevis
ENSPEMG00000014773	-	100	96.639	ENSCVAG00000000534	snrpd1	100	96.639	Cyprinodon_variegatus
ENSPEMG00000014773	-	100	97.479	ENSDARG00000011648	snrpd1	100	97.479	Danio_rerio
ENSPEMG00000014773	-	100	100.000	ENSDNOG00000040310	SNRPD1	100	100.000	Dasypus_novemcinctus
ENSPEMG00000014773	-	100	100.000	ENSDORG00000008349	Snrpd1	100	100.000	Dipodomys_ordii
ENSPEMG00000014773	-	79	82.979	FBgn0261933	SmD1	76	82.979	Drosophila_melanogaster
ENSPEMG00000014773	-	74	100.000	ENSETEG00000011689	SNRPD1	74	100.000	Echinops_telfairi
ENSPEMG00000014773	-	94	92.857	ENSEBUG00000003170	snrpd1	94	92.857	Eptatretus_burgeri
ENSPEMG00000014773	-	94	100.000	ENSEASG00005002433	SNRPD1	100	100.000	Equus_asinus_asinus
ENSPEMG00000014773	-	94	100.000	ENSECAG00000014373	SNRPD1	100	100.000	Equus_caballus
ENSPEMG00000014773	-	75	100.000	ENSEEUG00000004987	SNRPD1	100	100.000	Erinaceus_europaeus
ENSPEMG00000014773	-	93	85.586	ENSELUG00000000088	snrpd1	79	95.745	Esox_lucius
ENSPEMG00000014773	-	100	100.000	ENSFCAG00000012352	SNRPD1	100	100.000	Felis_catus
ENSPEMG00000014773	-	94	100.000	ENSFALG00000002646	SNRPD1	100	100.000	Ficedula_albicollis
ENSPEMG00000014773	-	100	97.479	ENSGMOG00000015607	snrpd1	100	97.479	Gadus_morhua
ENSPEMG00000014773	-	100	100.000	ENSGALG00000041334	SNRPD1	100	100.000	Gallus_gallus
ENSPEMG00000014773	-	100	96.639	ENSGAFG00000011171	snrpd1	100	96.639	Gambusia_affinis
ENSPEMG00000014773	-	100	97.479	ENSGACG00000005201	SNRPD1	100	97.479	Gasterosteus_aculeatus
ENSPEMG00000014773	-	100	100.000	ENSGAGG00000011197	SNRPD1	100	100.000	Gopherus_agassizii
ENSPEMG00000014773	-	81	94.792	ENSGGOG00000026706	-	80	94.792	Gorilla_gorilla
ENSPEMG00000014773	-	100	100.000	ENSGGOG00000041053	SNRPD1	100	100.000	Gorilla_gorilla
ENSPEMG00000014773	-	100	96.639	ENSHBUG00000003236	snrpd1	100	96.639	Haplochromis_burtoni
ENSPEMG00000014773	-	100	100.000	ENSHGLG00000007152	SNRPD1	100	100.000	Heterocephalus_glaber_female
ENSPEMG00000014773	-	100	100.000	ENSHGLG00100008618	SNRPD1	100	100.000	Heterocephalus_glaber_male
ENSPEMG00000014773	-	100	96.639	ENSIPUG00000003576	snrpd1	100	96.639	Ictalurus_punctatus
ENSPEMG00000014773	-	100	100.000	ENSSTOG00000000485	SNRPD1	100	100.000	Ictidomys_tridecemlineatus
ENSPEMG00000014773	-	100	100.000	ENSJJAG00000017698	Snrpd1	100	100.000	Jaculus_jaculus
ENSPEMG00000014773	-	100	96.639	ENSKMAG00000005987	snrpd1	100	96.639	Kryptolebias_marmoratus
ENSPEMG00000014773	-	100	96.639	ENSLBEG00000003327	snrpd1	100	96.639	Labrus_bergylta
ENSPEMG00000014773	-	100	100.000	ENSLACG00000001955	SNRPD1	100	100.000	Latimeria_chalumnae
ENSPEMG00000014773	-	98	97.436	ENSLOCG00000002003	snrpd1	100	97.436	Lepisosteus_oculatus
ENSPEMG00000014773	-	99	98.305	ENSLAFG00000005819	SNRPD1	100	98.305	Loxodonta_africana
ENSPEMG00000014773	-	100	100.000	ENSMFAG00000042080	SNRPD1	100	100.000	Macaca_fascicularis
ENSPEMG00000014773	-	96	100.000	ENSMMUG00000003992	SNRPD1	97	100.000	Macaca_mulatta
ENSPEMG00000014773	-	100	100.000	ENSMNEG00000041296	SNRPD1	100	100.000	Macaca_nemestrina
ENSPEMG00000014773	-	100	100.000	ENSMLEG00000028659	SNRPD1	100	100.000	Mandrillus_leucophaeus
ENSPEMG00000014773	-	100	96.639	ENSMAMG00000012971	snrpd1	100	96.639	Mastacembelus_armatus
ENSPEMG00000014773	-	100	96.639	ENSMZEG00005004685	snrpd1	100	96.639	Maylandia_zebra
ENSPEMG00000014773	-	97	100.000	ENSMGAG00000011598	SNRPD1	98	97.479	Meleagris_gallopavo
ENSPEMG00000014773	-	82	95.050	ENSMAUG00000006829	-	65	95.050	Mesocricetus_auratus
ENSPEMG00000014773	-	81	83.333	ENSMAUG00000016467	-	86	83.333	Mesocricetus_auratus
ENSPEMG00000014773	-	81	83.333	ENSMAUG00000016502	-	86	83.333	Mesocricetus_auratus
ENSPEMG00000014773	-	100	100.000	ENSMICG00000044066	SNRPD1	100	100.000	Microcebus_murinus
ENSPEMG00000014773	-	100	100.000	ENSMOCG00000017367	Snrpd1	100	100.000	Microtus_ochrogaster
ENSPEMG00000014773	-	100	96.639	ENSMMOG00000019089	snrpd1	100	96.639	Mola_mola
ENSPEMG00000014773	-	100	100.000	ENSMODG00000021487	SNRPD1	100	100.000	Monodelphis_domestica
ENSPEMG00000014773	-	100	96.639	ENSMALG00000014459	snrpd1	100	96.639	Monopterus_albus
ENSPEMG00000014773	-	100	100.000	MGP_CAROLIEiJ_G0021994	Snrpd1	100	100.000	Mus_caroli
ENSPEMG00000014773	-	100	100.000	ENSMUSG00000002477	Snrpd1	100	100.000	Mus_musculus
ENSPEMG00000014773	-	100	100.000	MGP_PahariEiJ_G0018731	Snrpd1	100	100.000	Mus_pahari
ENSPEMG00000014773	-	100	100.000	MGP_SPRETEiJ_G0022910	Snrpd1	100	100.000	Mus_spretus
ENSPEMG00000014773	-	100	99.160	ENSMPUG00000020041	-	100	99.160	Mustela_putorius_furo
ENSPEMG00000014773	-	98	98.291	ENSMPUG00000005567	-	100	100.000	Mustela_putorius_furo
ENSPEMG00000014773	-	97	97.414	ENSMLUG00000009124	SNRPD1	91	96.581	Myotis_lucifugus
ENSPEMG00000014773	-	100	100.000	ENSNGAG00000023946	Snrpd1	100	100.000	Nannospalax_galili
ENSPEMG00000014773	-	79	95.745	ENSNBRG00000012119	snrpd1	78	95.745	Neolamprologus_brichardi
ENSPEMG00000014773	-	100	97.479	ENSNLEG00000031430	SNRPD1	100	97.479	Nomascus_leucogenys
ENSPEMG00000014773	-	100	100.000	ENSODEG00000005764	SNRPD1	100	100.000	Octodon_degus
ENSPEMG00000014773	-	100	96.639	ENSONIG00000002486	snrpd1	100	96.639	Oreochromis_niloticus
ENSPEMG00000014773	-	82	88.776	ENSOANG00000004638	-	82	88.776	Ornithorhynchus_anatinus
ENSPEMG00000014773	-	98	98.291	ENSOCUG00000023761	-	100	100.000	Oryctolagus_cuniculus
ENSPEMG00000014773	-	100	99.160	ENSOCUG00000014399	-	100	99.160	Oryctolagus_cuniculus
ENSPEMG00000014773	-	94	96.429	ENSORLG00000012516	snrpd1	100	96.429	Oryzias_latipes
ENSPEMG00000014773	-	100	96.639	ENSORLG00020005743	snrpd1	100	96.639	Oryzias_latipes_hni
ENSPEMG00000014773	-	100	96.639	ENSORLG00015013402	snrpd1	100	96.639	Oryzias_latipes_hsok
ENSPEMG00000014773	-	100	96.639	ENSOMEG00000011571	snrpd1	100	96.639	Oryzias_melastigma
ENSPEMG00000014773	-	100	96.639	ENSOGAG00000007833	SNRPD1	98	99.145	Otolemur_garnettii
ENSPEMG00000014773	-	100	94.958	ENSOARG00000003413	-	85	94.958	Ovis_aries
ENSPEMG00000014773	-	100	100.000	ENSPPAG00000042593	SNRPD1	100	100.000	Pan_paniscus
ENSPEMG00000014773	-	100	100.000	ENSPPRG00000002399	SNRPD1	100	100.000	Panthera_pardus
ENSPEMG00000014773	-	94	72.321	ENSPPRG00000005009	-	92	72.321	Panthera_pardus
ENSPEMG00000014773	-	96	100.000	ENSPTIG00000013206	SNRPD1	100	100.000	Panthera_tigris_altaica
ENSPEMG00000014773	-	100	100.000	ENSPTRG00000009909	SNRPD1	100	100.000	Pan_troglodytes
ENSPEMG00000014773	-	86	94.118	ENSPTRG00000050159	-	87	94.118	Pan_troglodytes
ENSPEMG00000014773	-	100	100.000	ENSPANG00000023478	SNRPD1	100	100.000	Papio_anubis
ENSPEMG00000014773	-	88	95.238	ENSPKIG00000021610	snrpd1	94	95.238	Paramormyrops_kingsleyae
ENSPEMG00000014773	-	100	97.479	ENSPKIG00000003985	SNRPD1	100	97.479	Paramormyrops_kingsleyae
ENSPEMG00000014773	-	100	96.639	ENSPMGG00000001862	snrpd1	100	96.639	Periophthalmus_magnuspinnatus
ENSPEMG00000014773	-	86	82.692	ENSPMAG00000003938	-	85	82.692	Petromyzon_marinus
ENSPEMG00000014773	-	100	100.000	ENSPCIG00000020320	SNRPD1	100	100.000	Phascolarctos_cinereus
ENSPEMG00000014773	-	81	95.833	ENSPFOG00000012448	SNRPD1	85	95.833	Poecilia_formosa
ENSPEMG00000014773	-	81	95.833	ENSPLAG00000006738	snrpd1	85	95.833	Poecilia_latipinna
ENSPEMG00000014773	-	81	95.833	ENSPMEG00000021942	snrpd1	85	95.833	Poecilia_mexicana
ENSPEMG00000014773	-	100	96.639	ENSPREG00000007094	snrpd1	100	96.639	Poecilia_reticulata
ENSPEMG00000014773	-	100	100.000	ENSPPYG00000025874	SNRPD1	100	100.000	Pongo_abelii
ENSPEMG00000014773	-	100	100.000	ENSPCOG00000013327	SNRPD1	100	100.000	Propithecus_coquereli
ENSPEMG00000014773	-	100	100.000	ENSPVAG00000005511	SNRPD1	80	100.000	Pteropus_vampyrus
ENSPEMG00000014773	-	100	96.639	ENSPNAG00000017824	snrpd1	100	96.639	Pygocentrus_nattereri
ENSPEMG00000014773	-	100	100.000	ENSRNOG00000013714	Snrpd1	100	100.000	Rattus_norvegicus
ENSPEMG00000014773	-	100	100.000	ENSRBIG00000022996	SNRPD1	100	100.000	Rhinopithecus_bieti
ENSPEMG00000014773	-	100	100.000	ENSRROG00000027640	SNRPD1	100	100.000	Rhinopithecus_roxellana
ENSPEMG00000014773	-	100	100.000	ENSSBOG00000020998	SNRPD1	100	100.000	Saimiri_boliviensis_boliviensis
ENSPEMG00000014773	-	100	100.000	ENSSHAG00000011791	SNRPD1	100	100.000	Sarcophilus_harrisii
ENSPEMG00000014773	-	94	95.536	ENSSFOG00015008809	-	94	95.536	Scleropages_formosus
ENSPEMG00000014773	-	94	95.536	ENSSFOG00015022253	-	94	95.536	Scleropages_formosus
ENSPEMG00000014773	-	94	95.536	ENSSMAG00000008765	snrpd1	94	95.536	Scophthalmus_maximus
ENSPEMG00000014773	-	91	95.370	ENSSDUG00000010521	snrpd1	92	95.370	Seriola_dumerili
ENSPEMG00000014773	-	100	96.639	ENSSLDG00000011858	snrpd1	100	96.639	Seriola_lalandi_dorsalis
ENSPEMG00000014773	-	56	100.000	ENSSARG00000004271	SNRPD1	100	100.000	Sorex_araneus
ENSPEMG00000014773	-	100	100.000	ENSSPUG00000002824	SNRPD1	100	100.000	Sphenodon_punctatus
ENSPEMG00000014773	-	94	96.429	ENSSPAG00000015229	snrpd1	100	96.429	Stegastes_partitus
ENSPEMG00000014773	-	100	100.000	ENSSSCG00000003701	SNRPD1	100	100.000	Sus_scrofa
ENSPEMG00000014773	-	97	100.000	ENSTGUG00000005095	SNRPD1	100	98.319	Taeniopygia_guttata
ENSPEMG00000014773	-	94	96.429	ENSTRUG00000008977	snrpd1	100	96.429	Takifugu_rubripes
ENSPEMG00000014773	-	81	91.667	ENSTNIG00000001224	snrpd1	92	91.667	Tetraodon_nigroviridis
ENSPEMG00000014773	-	74	100.000	ENSTBEG00000013776	SNRPD1	100	100.000	Tupaia_belangeri
ENSPEMG00000014773	-	97	100.000	ENSTTRG00000002654	SNRPD1	100	100.000	Tursiops_truncatus
ENSPEMG00000014773	-	96	100.000	ENSUAMG00000013431	SNRPD1	97	100.000	Ursus_americanus
ENSPEMG00000014773	-	100	100.000	ENSUMAG00000019740	SNRPD1	100	100.000	Ursus_maritimus
ENSPEMG00000014773	-	100	100.000	ENSVPAG00000010056	SNRPD1	80	100.000	Vicugna_pacos
ENSPEMG00000014773	-	94	100.000	ENSVVUG00000004009	SNRPD1	100	100.000	Vulpes_vulpes
ENSPEMG00000014773	-	100	98.319	ENSXETG00000027354	snrpd1	100	98.319	Xenopus_tropicalis
ENSPEMG00000014773	-	100	96.639	ENSXCOG00000020108	snrpd1	100	96.639	Xiphophorus_couchianus
ENSPEMG00000014773	-	100	96.639	ENSXMAG00000003368	snrpd1	100	96.639	Xiphophorus_maculatus