EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPEMG00000015021 (Gene tree)
Gene ID: 102917011
Gene Symbol: A1cf
Alias: -
Full Name: APOBEC1 complementation factor
Gene Type: protein_coding
Species: Peromyscus_maniculatus_bairdii
Status: putative
Strand: Plus strand
Length: 91646 bases
Position: chrKI615383.1:2463451-2555096
Accession: 102917011
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPEMP00000015531	DND1_DSRM	PF14709.7	9.2e-26	1	1
ENSPEMP00000015531	RRM_1	PF00076.22	4.9e-40	1	3
ENSPEMP00000015531	RRM_1	PF00076.22	4.9e-40	2	3
ENSPEMP00000015531	RRM_1	PF00076.22	4.9e-40	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPEMT00000019830	-	5638	XM_006975824	ENSPEMP00000015531	595 (aa)	XP_006975886	UPI00077DD791

Gene Model

Click here to download ENSPEMG00000015021's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPEMG00000015021's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPEMG00000015021	A1cf	52	30.088	ENSPEMG00000012660	Rbm14	95	30.189
ENSPEMG00000015021	A1cf	76	56.000	ENSPEMG00000011088	Rbm47	84	49.821
ENSPEMG00000015021	A1cf	87	71.711	ENSPEMG00000013899	Rbm46	97	71.475
ENSPEMG00000015021	A1cf	51	53.074	ENSPEMG00000021017	Syncrip	57	52.000
ENSPEMG00000015021	A1cf	51	53.571	ENSPEMG00000001783	-	50	52.681

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPEMG00000015021	A1cf	100	94.454	ENSG00000148584	A1CF	100	99.005	Homo_sapiens
ENSPEMG00000015021	A1cf	100	72.637	ENSAPOG00000008259	a1cf	100	72.803	Acanthochromis_polyacanthus
ENSPEMG00000015021	A1cf	100	93.277	ENSAMEG00000000523	A1CF	100	93.782	Ailuropoda_melanoleuca
ENSPEMG00000015021	A1cf	100	74.715	ENSACIG00000008632	a1cf	100	76.020	Amphilophus_citrinellus
ENSPEMG00000015021	A1cf	100	73.322	ENSAOCG00000023744	a1cf	93	85.928	Amphiprion_ocellaris
ENSPEMG00000015021	A1cf	100	74.304	ENSAPEG00000009537	a1cf	100	75.286	Amphiprion_percula
ENSPEMG00000015021	A1cf	100	75.407	ENSATEG00000013720	a1cf	100	76.710	Anabas_testudineus
ENSPEMG00000015021	A1cf	100	88.423	ENSAPLG00000002964	A1CF	100	88.423	Anas_platyrhynchos
ENSPEMG00000015021	A1cf	100	83.221	ENSACAG00000015269	A1CF	100	83.221	Anolis_carolinensis
ENSPEMG00000015021	A1cf	100	93.445	ENSANAG00000019974	A1CF	100	93.445	Aotus_nancymaae
ENSPEMG00000015021	A1cf	100	72.386	ENSACLG00000017428	a1cf	100	74.837	Astatotilapia_calliptera
ENSPEMG00000015021	A1cf	100	73.884	ENSAMXG00000018180	a1cf	100	74.050	Astyanax_mexicanus
ENSPEMG00000015021	A1cf	100	92.269	ENSBTAG00000021195	A1CF	100	92.857	Bos_taurus
ENSPEMG00000015021	A1cf	100	95.126	ENSCJAG00000005045	A1CF	100	95.126	Callithrix_jacchus
ENSPEMG00000015021	A1cf	100	92.437	ENSCAFG00000015581	A1CF	100	93.277	Canis_familiaris
ENSPEMG00000015021	A1cf	100	92.437	ENSCAFG00020026421	A1CF	100	93.277	Canis_lupus_dingo
ENSPEMG00000015021	A1cf	100	92.941	ENSCHIG00000020411	A1CF	100	92.941	Capra_hircus
ENSPEMG00000015021	A1cf	95	93.085	ENSTSYG00000001755	A1CF	100	92.349	Carlito_syrichta
ENSPEMG00000015021	A1cf	100	82.972	ENSCAPG00000017386	A1CF	100	82.972	Cavia_aperea
ENSPEMG00000015021	A1cf	100	93.950	ENSCPOG00000009807	A1CF	100	94.118	Cavia_porcellus
ENSPEMG00000015021	A1cf	100	94.958	ENSCCAG00000018168	A1CF	100	94.958	Cebus_capucinus
ENSPEMG00000015021	A1cf	100	93.782	ENSCATG00000043715	A1CF	100	93.950	Cercocebus_atys
ENSPEMG00000015021	A1cf	100	93.792	ENSCLAG00000010424	A1CF	100	93.792	Chinchilla_lanigera
ENSPEMG00000015021	A1cf	100	94.790	ENSCSAG00000007032	A1CF	100	94.958	Chlorocebus_sabaeus
ENSPEMG00000015021	A1cf	98	87.627	ENSCHOG00000009089	A1CF	98	88.305	Choloepus_hoffmanni
ENSPEMG00000015021	A1cf	100	87.919	ENSCPBG00000026464	A1CF	100	87.919	Chrysemys_picta_bellii
ENSPEMG00000015021	A1cf	100	94.790	ENSCANG00000038032	A1CF	100	94.958	Colobus_angolensis_palliatus
ENSPEMG00000015021	A1cf	100	96.975	ENSCGRG00001017413	A1cf	100	96.975	Cricetulus_griseus_chok1gshd
ENSPEMG00000015021	A1cf	100	96.134	ENSCGRG00000017332	A1cf	100	96.134	Cricetulus_griseus_crigri
ENSPEMG00000015021	A1cf	100	74.793	ENSCSEG00000002361	a1cf	100	76.617	Cynoglossus_semilaevis
ENSPEMG00000015021	A1cf	100	74.104	ENSCVAG00000010520	a1cf	100	75.896	Cyprinodon_variegatus
ENSPEMG00000015021	A1cf	100	77.205	ENSDARG00000002968	a1cf	100	78.869	Danio_rerio
ENSPEMG00000015021	A1cf	100	92.773	ENSDNOG00000002829	A1CF	100	92.773	Dasypus_novemcinctus
ENSPEMG00000015021	A1cf	81	92.754	ENSETEG00000012527	A1CF	81	92.754	Echinops_telfairi
ENSPEMG00000015021	A1cf	100	94.640	ENSEASG00005012924	A1CF	100	94.807	Equus_asinus_asinus
ENSPEMG00000015021	A1cf	100	94.137	ENSECAG00000010424	A1CF	100	94.305	Equus_caballus
ENSPEMG00000015021	A1cf	78	78.587	ENSEEUG00000000013	A1CF	100	78.587	Erinaceus_europaeus
ENSPEMG00000015021	A1cf	100	78.702	ENSELUG00000003159	a1cf	100	79.700	Esox_lucius
ENSPEMG00000015021	A1cf	100	90.084	ENSFCAG00000011179	A1CF	100	90.924	Felis_catus
ENSPEMG00000015021	A1cf	100	85.570	ENSFALG00000013183	A1CF	100	85.570	Ficedula_albicollis
ENSPEMG00000015021	A1cf	100	92.101	ENSFDAG00000019371	A1CF	100	92.101	Fukomys_damarensis
ENSPEMG00000015021	A1cf	100	69.381	ENSFHEG00000019652	a1cf	96	82.812	Fundulus_heteroclitus
ENSPEMG00000015021	A1cf	100	72.112	ENSGMOG00000018943	a1cf	100	72.112	Gadus_morhua
ENSPEMG00000015021	A1cf	95	87.080	ENSGALG00000003765	A1CF	97	87.080	Gallus_gallus
ENSPEMG00000015021	A1cf	100	69.737	ENSGAFG00000014868	a1cf	100	70.724	Gambusia_affinis
ENSPEMG00000015021	A1cf	100	74.013	ENSGACG00000010241	a1cf	100	74.507	Gasterosteus_aculeatus
ENSPEMG00000015021	A1cf	94	87.567	ENSGAGG00000016508	A1CF	97	87.567	Gopherus_agassizii
ENSPEMG00000015021	A1cf	100	94.622	ENSGGOG00000009670	A1CF	100	94.622	Gorilla_gorilla
ENSPEMG00000015021	A1cf	100	73.573	ENSHBUG00000021959	a1cf	100	75.530	Haplochromis_burtoni
ENSPEMG00000015021	A1cf	100	94.118	ENSHGLG00000008955	A1CF	100	94.118	Heterocephalus_glaber_female
ENSPEMG00000015021	A1cf	100	93.445	ENSHGLG00100000518	A1CF	100	93.445	Heterocephalus_glaber_male
ENSPEMG00000015021	A1cf	100	69.707	ENSHCOG00000017669	a1cf	100	72.520	Hippocampus_comes
ENSPEMG00000015021	A1cf	89	82.868	ENSIPUG00000010367	a1cf	99	81.004	Ictalurus_punctatus
ENSPEMG00000015021	A1cf	100	76.423	ENSKMAG00000006568	a1cf	100	77.236	Kryptolebias_marmoratus
ENSPEMG00000015021	A1cf	99	74.713	ENSLBEG00000020994	a1cf	98	76.355	Labrus_bergylta
ENSPEMG00000015021	A1cf	100	81.469	ENSLACG00000008061	A1CF	100	81.469	Latimeria_chalumnae
ENSPEMG00000015021	A1cf	100	81.667	ENSLOCG00000006302	a1cf	100	81.833	Lepisosteus_oculatus
ENSPEMG00000015021	A1cf	100	94.118	ENSLAFG00000015462	A1CF	100	94.118	Loxodonta_africana
ENSPEMG00000015021	A1cf	100	93.782	ENSMFAG00000035948	A1CF	100	93.950	Macaca_fascicularis
ENSPEMG00000015021	A1cf	100	93.782	ENSMMUG00000007077	A1CF	100	93.950	Macaca_mulatta
ENSPEMG00000015021	A1cf	100	93.613	ENSMNEG00000031454	A1CF	100	93.782	Macaca_nemestrina
ENSPEMG00000015021	A1cf	100	95.126	ENSMLEG00000037223	A1CF	100	95.294	Mandrillus_leucophaeus
ENSPEMG00000015021	A1cf	100	72.831	ENSMAMG00000010402	a1cf	100	75.000	Mastacembelus_armatus
ENSPEMG00000015021	A1cf	100	75.500	ENSMZEG00005013245	a1cf	100	76.500	Maylandia_zebra
ENSPEMG00000015021	A1cf	100	87.270	ENSMGAG00000001507	A1CF	100	87.270	Meleagris_gallopavo
ENSPEMG00000015021	A1cf	100	96.807	ENSMAUG00000007422	A1cf	100	96.807	Mesocricetus_auratus
ENSPEMG00000015021	A1cf	100	92.140	ENSMICG00000003377	A1CF	100	92.642	Microcebus_murinus
ENSPEMG00000015021	A1cf	100	96.134	ENSMOCG00000021536	A1cf	100	96.134	Microtus_ochrogaster
ENSPEMG00000015021	A1cf	100	66.939	ENSMMOG00000009422	a1cf	100	69.067	Mola_mola
ENSPEMG00000015021	A1cf	89	90.548	ENSMODG00000016478	A1CF	99	88.483	Monodelphis_domestica
ENSPEMG00000015021	A1cf	100	72.712	ENSMALG00000012992	a1cf	100	72.712	Monopterus_albus
ENSPEMG00000015021	A1cf	100	96.134	MGP_CAROLIEiJ_G0022873	A1cf	100	96.134	Mus_caroli
ENSPEMG00000015021	A1cf	100	96.134	ENSMUSG00000052595	A1cf	99	97.635	Mus_musculus
ENSPEMG00000015021	A1cf	100	95.630	MGP_PahariEiJ_G0014366	A1cf	100	95.630	Mus_pahari
ENSPEMG00000015021	A1cf	100	95.630	MGP_SPRETEiJ_G0023792	A1cf	100	95.630	Mus_spretus
ENSPEMG00000015021	A1cf	100	87.395	ENSMPUG00000016971	A1CF	100	87.731	Mustela_putorius_furo
ENSPEMG00000015021	A1cf	100	92.773	ENSMLUG00000016071	A1CF	100	92.773	Myotis_lucifugus
ENSPEMG00000015021	A1cf	100	95.798	ENSNGAG00000015136	A1cf	100	95.798	Nannospalax_galili
ENSPEMG00000015021	A1cf	100	73.899	ENSNBRG00000001712	a1cf	100	75.856	Neolamprologus_brichardi
ENSPEMG00000015021	A1cf	100	95.126	ENSNLEG00000012028	A1CF	100	95.126	Nomascus_leucogenys
ENSPEMG00000015021	A1cf	94	87.211	ENSMEUG00000015909	A1CF	100	87.567	Notamacropus_eugenii
ENSPEMG00000015021	A1cf	88	83.429	ENSOPRG00000010667	A1CF	100	82.418	Ochotona_princeps
ENSPEMG00000015021	A1cf	100	74.225	ENSONIG00000019105	a1cf	100	75.367	Oreochromis_niloticus
ENSPEMG00000015021	A1cf	78	88.009	ENSOANG00000007360	A1CF	99	88.009	Ornithorhynchus_anatinus
ENSPEMG00000015021	A1cf	100	91.275	ENSOCUG00000011587	A1CF	100	91.946	Oryctolagus_cuniculus
ENSPEMG00000015021	A1cf	100	73.529	ENSORLG00000013342	a1cf	100	73.529	Oryzias_latipes
ENSPEMG00000015021	A1cf	100	74.225	ENSORLG00020000586	a1cf	100	74.225	Oryzias_latipes_hni
ENSPEMG00000015021	A1cf	100	74.062	ENSORLG00015018569	a1cf	100	74.062	Oryzias_latipes_hsok
ENSPEMG00000015021	A1cf	100	73.159	ENSOMEG00000013531	a1cf	100	73.159	Oryzias_melastigma
ENSPEMG00000015021	A1cf	100	92.437	ENSOGAG00000012884	A1CF	100	93.109	Otolemur_garnettii
ENSPEMG00000015021	A1cf	100	92.941	ENSOARG00000013695	A1CF	100	92.941	Ovis_aries
ENSPEMG00000015021	A1cf	97	92.548	ENSPPAG00000028115	A1CF	100	96.761	Pan_paniscus
ENSPEMG00000015021	A1cf	100	91.765	ENSPPRG00000012180	A1CF	100	92.605	Panthera_pardus
ENSPEMG00000015021	A1cf	100	91.765	ENSPTIG00000021223	A1CF	100	92.605	Panthera_tigris_altaica
ENSPEMG00000015021	A1cf	100	94.454	ENSPTRG00000002508	A1CF	100	94.454	Pan_troglodytes
ENSPEMG00000015021	A1cf	100	93.782	ENSPANG00000021988	A1CF	100	93.950	Papio_anubis
ENSPEMG00000015021	A1cf	100	79.700	ENSPKIG00000025176	a1cf	100	79.867	Paramormyrops_kingsleyae
ENSPEMG00000015021	A1cf	100	86.074	ENSPSIG00000010318	A1CF	100	86.074	Pelodiscus_sinensis
ENSPEMG00000015021	A1cf	88	71.429	ENSPMGG00000013359	a1cf	99	67.742	Periophthalmus_magnuspinnatus
ENSPEMG00000015021	A1cf	100	86.745	ENSPCIG00000002175	A1CF	100	87.081	Phascolarctos_cinereus
ENSPEMG00000015021	A1cf	100	75.570	ENSPFOG00000006683	a1cf	100	77.036	Poecilia_formosa
ENSPEMG00000015021	A1cf	100	75.407	ENSPFOG00000007437	-	100	76.873	Poecilia_formosa
ENSPEMG00000015021	A1cf	100	74.267	ENSPLAG00000000026	a1cf	100	75.733	Poecilia_latipinna
ENSPEMG00000015021	A1cf	100	74.267	ENSPLAG00000001210	-	100	75.733	Poecilia_latipinna
ENSPEMG00000015021	A1cf	100	66.830	ENSPMEG00000000921	a1cf	100	68.301	Poecilia_mexicana
ENSPEMG00000015021	A1cf	100	67.974	ENSPMEG00000015529	-	100	69.444	Poecilia_mexicana
ENSPEMG00000015021	A1cf	100	75.570	ENSPREG00000016298	a1cf	100	77.036	Poecilia_reticulata
ENSPEMG00000015021	A1cf	100	93.613	ENSPPYG00000002819	A1CF	100	93.613	Pongo_abelii
ENSPEMG00000015021	A1cf	79	72.727	ENSPCAG00000006463	A1CF	79	72.727	Procavia_capensis
ENSPEMG00000015021	A1cf	100	93.456	ENSPCOG00000024172	A1CF	100	94.128	Propithecus_coquereli
ENSPEMG00000015021	A1cf	100	74.878	ENSPNYG00000017944	a1cf	100	76.835	Pundamilia_nyererei
ENSPEMG00000015021	A1cf	100	79.139	ENSPNAG00000007704	a1cf	100	79.139	Pygocentrus_nattereri
ENSPEMG00000015021	A1cf	100	95.126	ENSRNOG00000033195	A1cf	100	95.126	Rattus_norvegicus
ENSPEMG00000015021	A1cf	100	88.442	ENSRBIG00000042892	A1CF	100	91.781	Rhinopithecus_bieti
ENSPEMG00000015021	A1cf	100	95.126	ENSRROG00000041398	A1CF	100	95.294	Rhinopithecus_roxellana
ENSPEMG00000015021	A1cf	100	94.790	ENSSBOG00000021930	A1CF	100	94.790	Saimiri_boliviensis_boliviensis
ENSPEMG00000015021	A1cf	100	88.423	ENSSHAG00000005096	A1CF	100	88.591	Sarcophilus_harrisii
ENSPEMG00000015021	A1cf	100	78.607	ENSSFOG00015011774	a1cf	100	78.441	Scleropages_formosus
ENSPEMG00000015021	A1cf	100	74.756	ENSSMAG00000013271	a1cf	100	75.407	Scophthalmus_maximus
ENSPEMG00000015021	A1cf	100	76.119	ENSSDUG00000013930	a1cf	100	77.114	Seriola_dumerili
ENSPEMG00000015021	A1cf	100	69.802	ENSSLDG00000004290	a1cf	100	70.132	Seriola_lalandi_dorsalis
ENSPEMG00000015021	A1cf	95	81.979	ENSSARG00000005940	A1CF	96	81.979	Sorex_araneus
ENSPEMG00000015021	A1cf	95	86.995	ENSSPUG00000006797	A1CF	95	86.995	Sphenodon_punctatus
ENSPEMG00000015021	A1cf	100	93.782	ENSSSCG00000010431	A1CF	100	93.782	Sus_scrofa
ENSPEMG00000015021	A1cf	100	86.545	ENSTGUG00000005090	A1CF	100	86.545	Taeniopygia_guttata
ENSPEMG00000015021	A1cf	100	74.062	ENSTRUG00000001982	a1cf	100	74.062	Takifugu_rubripes
ENSPEMG00000015021	A1cf	100	74.472	ENSTNIG00000003580	a1cf	100	74.472	Tetraodon_nigroviridis
ENSPEMG00000015021	A1cf	97	84.749	ENSTTRG00000013190	A1CF	95	84.749	Tursiops_truncatus
ENSPEMG00000015021	A1cf	100	91.933	ENSUAMG00000020065	A1CF	100	92.437	Ursus_americanus
ENSPEMG00000015021	A1cf	100	93.613	ENSUMAG00000011162	A1CF	100	93.613	Ursus_maritimus
ENSPEMG00000015021	A1cf	87	88.100	ENSVPAG00000006130	A1CF	86	88.100	Vicugna_pacos
ENSPEMG00000015021	A1cf	100	91.933	ENSVVUG00000002504	A1CF	100	92.101	Vulpes_vulpes
ENSPEMG00000015021	A1cf	100	77.667	ENSXETG00000006611	a1cf	100	77.667	Xenopus_tropicalis
ENSPEMG00000015021	A1cf	100	75.738	ENSXCOG00000003302	a1cf	100	76.721	Xiphophorus_couchianus
ENSPEMG00000015021	A1cf	100	76.885	ENSXMAG00000016703	a1cf	100	77.869	Xiphophorus_maculatus