EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPEMG00000015555 (Gene tree)
Gene ID: -
Gene Symbol: BC025920
Alias: -
Full Name: cDNA sequence BC025920
Gene Type: protein_coding
Species: Peromyscus_maniculatus_bairdii
Status: putative
Strand: Minus strand
Length: 413 bases
Position: chrKI615417.1:427532-427944
Accession: 2670983
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPEMP00000016286	zf-C2H2	PF00096.26	3.7e-16	1	2
ENSPEMP00000016286	zf-C2H2	PF00096.26	3.7e-16	2	2
ENSPEMP00000016286	zf-met	PF12874.7	7.5e-06	1	1
ENSPEMP00000016286	zf-C2H2_jaz	PF12171.8	3.2e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPEMT00000020596	-	366	-	ENSPEMP00000016286	122 (aa)	-	-

Gene Model

Click here to download ENSPEMG00000015555's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPEMG00000015555's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPEMG00000015555	BC025920	97	50.820	ENSPEMG00000016507	Zfp26	70	50.820
ENSPEMG00000015555	BC025920	97	46.341	ENSPEMG00000007595	-	81	46.341
ENSPEMG00000015555	BC025920	97	49.587	ENSPEMG00000008173	-	72	49.587
ENSPEMG00000015555	BC025920	100	43.089	ENSPEMG00000023329	-	72	43.089
ENSPEMG00000015555	BC025920	97	47.674	ENSPEMG00000014415	Zfp1	60	47.674
ENSPEMG00000015555	BC025920	97	43.443	ENSPEMG00000023883	-	70	43.443
ENSPEMG00000015555	BC025920	97	45.902	ENSPEMG00000000548	-	74	45.902
ENSPEMG00000015555	BC025920	96	42.623	ENSPEMG00000022945	-	67	42.623
ENSPEMG00000015555	BC025920	97	34.783	ENSPEMG00000016745	Zfp319	76	39.496
ENSPEMG00000015555	BC025920	99	44.262	ENSPEMG00000024167	Zfp354a	67	44.262
ENSPEMG00000015555	BC025920	99	47.059	ENSPEMG00000000403	-	63	47.059
ENSPEMG00000015555	BC025920	95	46.835	ENSPEMG00000011739	Snai2	51	46.835
ENSPEMG00000015555	BC025920	97	40.206	ENSPEMG00000014980	Zfp64	57	38.372
ENSPEMG00000015555	BC025920	97	42.975	ENSPEMG00000020736	Zfp672	88	42.975
ENSPEMG00000015555	BC025920	98	42.276	ENSPEMG00000008817	-	80	42.276
ENSPEMG00000015555	BC025920	97	48.421	ENSPEMG00000007461	-	90	48.421
ENSPEMG00000015555	BC025920	98	43.548	ENSPEMG00000007241	-	73	43.548
ENSPEMG00000015555	BC025920	99	46.032	ENSPEMG00000000472	Zfp28	54	46.032
ENSPEMG00000015555	BC025920	97	44.348	ENSPEMG00000000870	Repin1	62	44.348
ENSPEMG00000015555	BC025920	97	46.774	ENSPEMG00000020749	-	78	41.584
ENSPEMG00000015555	BC025920	99	48.760	ENSPEMG00000009428	Zfp39	51	48.760
ENSPEMG00000015555	BC025920	97	40.244	ENSPEMG00000014281	-	100	42.857
ENSPEMG00000015555	BC025920	97	45.528	ENSPEMG00000011776	-	74	45.528
ENSPEMG00000015555	BC025920	97	42.353	ENSPEMG00000018947	Zfp784	66	42.353
ENSPEMG00000015555	BC025920	97	41.463	ENSPEMG00000020934	-	86	41.463
ENSPEMG00000015555	BC025920	97	42.149	ENSPEMG00000010242	-	61	42.149
ENSPEMG00000015555	BC025920	97	44.628	ENSPEMG00000000860	Zfp94	65	44.628
ENSPEMG00000015555	BC025920	98	38.889	ENSPEMG00000016975	Zfp940	65	38.889
ENSPEMG00000015555	BC025920	97	44.262	ENSPEMG00000018022	-	60	44.262
ENSPEMG00000015555	BC025920	97	46.610	ENSPEMG00000022834	Zfp709	81	46.610
ENSPEMG00000015555	BC025920	97	44.262	ENSPEMG00000021548	Zfp712	89	46.721
ENSPEMG00000015555	BC025920	97	47.967	ENSPEMG00000023566	Zfp768	51	47.967
ENSPEMG00000015555	BC025920	98	42.400	ENSPEMG00000021937	-	82	42.400
ENSPEMG00000015555	BC025920	99	45.455	ENSPEMG00000017339	2610008E11Rik	72	45.455
ENSPEMG00000015555	BC025920	97	36.036	ENSPEMG00000022216	-	98	36.036

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPEMG00000015555	BC025920	96	48.760	ENSETEG00000018209	-	69	48.760	Echinops_telfairi
ENSPEMG00000015555	BC025920	97	50.794	ENSMPUG00000006593	-	54	50.794	Mustela_putorius_furo
ENSPEMG00000015555	BC025920	97	50.407	ENSTTRG00000017233	-	54	50.407	Tursiops_truncatus
ENSPEMG00000015555	BC025920	96	52.137	ENSUAMG00000010517	-	66	52.137	Ursus_americanus
ENSPEMG00000015555	BC025920	96	52.137	ENSUMAG00000007151	-	66	52.137	Ursus_maritimus
ENSPEMG00000015555	BC025920	99	53.226	ENSUMAG00000007135	-	74	53.226	Ursus_maritimus